RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 ETS1P14921 441 aa23.24■■□□□ 1.31
IRF3-201ENST00000309877 GABRR2P28476 465 aa23.24■■□□□ 1.31
IRF3-201ENST00000309877 PLTPP55058 493 aa23.24■■□□□ 1.31
IRF3-201ENST00000309877 ACBD5Q5T8D3 534 aaPredicted RBP23.24■■□□□ 1.31
IRF3-201ENST00000309877 PIK3R6Q5UE93 754 aa23.24■■□□□ 1.31
IRF3-201ENST00000309877 LRRC31Q6UY01 552 aa23.24■■□□□ 1.31
IRF3-201ENST00000309877 TMEM150AQ86TG1 271 aa23.24■■□□□ 1.31
IRF3-201ENST00000309877 PRUNE1Q86TP1 453 aa23.24■■□□□ 1.31
IRF3-201ENST00000309877 CATSPERBQ9H7T0 1116 aa23.24■■□□□ 1.31
IRF3-201ENST00000309877 TRPC7Q9HCX4 862 aa23.24■■□□□ 1.31
IRF3-201ENST00000309877 GRHL1Q9NZI5 618 aa23.24■■□□□ 1.31
IRF3-201ENST00000309877 WHRNQ9P202 907 aa23.24■■□□□ 1.31
IRF3-201ENST00000309877 BCLAF3A2AJT9 711 aaKnown RBP23.23■■□□□ 1.31
IRF3-201ENST00000309877 HACD1B0YJ81 288 aa23.23■■□□□ 1.31
IRF3-201ENST00000309877 FGF10O15520 208 aaPredicted RBP23.23■■□□□ 1.31
IRF3-201ENST00000309877 OAS1P00973 400 aaKnown RBP23.23■■□□□ 1.31
IRF3-201ENST00000309877 ZSCAN5DPP0CG00 497 aa23.23■■□□□ 1.31
IRF3-201ENST00000309877 ITIH2P19823 946 aa23.23■■□□□ 1.31
IRF3-201ENST00000309877 SERPINB6P35237 376 aa23.23■■□□□ 1.31
IRF3-201ENST00000309877 HARS2P49590 506 aaKnown RBP23.23■■□□□ 1.31
IRF3-201ENST00000309877 GDF10P55107 478 aa23.23■■□□□ 1.31
IRF3-201ENST00000309877 MS4A13Q5J8X5 152 aa23.23■■□□□ 1.31
IRF3-201ENST00000309877 MANEALQ5VSG8 457 aa23.23■■□□□ 1.31
IRF3-201ENST00000309877 PPP2R2DQ66LE6 453 aa23.23■■□□□ 1.31
IRF3-201ENST00000309877 HS6ST3Q8IZP7 471 aa23.23■■□□□ 1.31
IRF3-201ENST00000309877 CCDC33Q8N5R6 958 aa23.23■■□□□ 1.31
IRF3-201ENST00000309877 GLIS1Q8NBF1 620 aa23.23■■□□□ 1.31
IRF3-201ENST00000309877 SLC22A17Q8WUG5 538 aa23.23■■□□□ 1.31
IRF3-201ENST00000309877 MRPS31Q92665 395 aaKnown RBP23.23■■□□□ 1.31
IRF3-201ENST00000309877 GCNAQ96QF7 691 aa23.23■■□□□ 1.31
IRF3-201ENST00000309877 RAD54BQ9Y620 910 aa23.23■■□□□ 1.31
IRF3-201ENST00000309877 KCNN4O15554 427 aa23.22■■□□□ 1.31
IRF3-201ENST00000309877 RBL1P28749 1068 aa23.22■■□□□ 1.31
IRF3-201ENST00000309877 ECHS1P30084 290 aa23.22■■□□□ 1.31
IRF3-201ENST00000309877 KCNQ1P51787 676 aa23.22■■□□□ 1.31
IRF3-201ENST00000309877 GPS1Q13098 491 aa23.22■■□□□ 1.31
IRF3-201ENST00000309877 PDK1Q15118 436 aa23.22■■□□□ 1.31
IRF3-201ENST00000309877 SLC45A4Q5BKX6 768 aa23.22■■□□□ 1.31
IRF3-201ENST00000309877 C14orf80Q86SX3 495 aa23.22■■□□□ 1.31
IRF3-201ENST00000309877 BBOF1Q8ND07 529 aa23.22■■□□□ 1.31
IRF3-201ENST00000309877 TFB1MQ8WVM0 346 aaKnown RBP23.22■■□□□ 1.31
IRF3-201ENST00000309877 ARNTL2Q8WYA1 636 aa23.22■■□□□ 1.31
IRF3-201ENST00000309877 PLD4Q96BZ4 506 aa23.22■■□□□ 1.31
IRF3-201ENST00000309877 LRRC45Q96CN5 670 aa23.22■■□□□ 1.31
IRF3-201ENST00000309877 GDAP1L1Q96MZ0 367 aa23.22■■□□□ 1.31
IRF3-201ENST00000309877 CORO1BQ9BR76 489 aa23.22■■□□□ 1.31
IRF3-201ENST00000309877 RNF38Q9H0F5 515 aa23.22■■□□□ 1.31
IRF3-201ENST00000309877 NEUROG2Q9H2A3 272 aa23.22■■□□□ 1.31
IRF3-201ENST00000309877 ASAH2Q9NR71 780 aa23.22■■□□□ 1.31
IRF3-201ENST00000309877 H0YGN5 161 aa23.22■■□□□ 1.31
IRF3-201ENST00000309877 PPP1R12AO14974 1030 aaPredicted RBP23.22■■□□□ 1.31
IRF3-201ENST00000309877 FAM153BP0C7A2 387 aa23.22■■□□□ 1.31
IRF3-201ENST00000309877 MBL2P11226 248 aaPredicted RBP23.22■■□□□ 1.31
IRF3-201ENST00000309877 EPCAMP16422 314 aa23.22■■□□□ 1.31
IRF3-201ENST00000309877 IVDP26440 423 aa23.22■■□□□ 1.31
IRF3-201ENST00000309877 CDC25CP30307 473 aa23.22■■□□□ 1.31
IRF3-201ENST00000309877 HOXC13P31276 330 aa23.22■■□□□ 1.31
IRF3-201ENST00000309877 ACTN2P35609 894 aa23.22■■□□□ 1.31
IRF3-201ENST00000309877 AUHQ13825 339 aaKnown RBP23.22■■□□□ 1.31
IRF3-201ENST00000309877 FAM153CQ494X1 144 aa23.22■■□□□ 1.31
IRF3-201ENST00000309877 TMC8Q8IU68 726 aa23.22■■□□□ 1.31
IRF3-201ENST00000309877 OLFM3Q96PB7 478 aa23.22■■□□□ 1.31
IRF3-201ENST00000309877 QKIQ96PU8 341 aaKnown RBP eCLIP23.22■■□□□ 1.31
IRF3-201ENST00000309877 FAM129AQ9BZQ8 928 aa23.22■■□□□ 1.31
IRF3-201ENST00000309877 FAM153AQ9UHL3 310 aa23.22■■□□□ 1.31
IRF3-201ENST00000309877 DPP7Q9UHL4 492 aa23.22■■□□□ 1.31
IRF3-201ENST00000309877 VANGL2Q9ULK5 521 aa23.22■■□□□ 1.31
IRF3-201ENST00000309877 PER2O15055 1255 aa23.21■■□□□ 1.31
IRF3-201ENST00000309877 MYL4P12829 197 aa23.21■■□□□ 1.31
IRF3-201ENST00000309877 SLC11A2P49281 568 aa23.21■■□□□ 1.31
IRF3-201ENST00000309877 P3H1Q32P28 736 aa23.21■■□□□ 1.31
IRF3-201ENST00000309877 RAP1GAP2Q684P5 730 aa23.21■■□□□ 1.31
IRF3-201ENST00000309877 CCNYQ8ND76 341 aa23.21■■□□□ 1.31
IRF3-201ENST00000309877 LRRN4Q8WUT4 740 aa23.21■■□□□ 1.31
IRF3-201ENST00000309877 ART4Q93070 314 aa23.21■■□□□ 1.31
IRF3-201ENST00000309877 CAVIN3Q969G5 261 aa23.21■■□□□ 1.31
IRF3-201ENST00000309877 FMO2Q99518 471 aa23.21■■□□□ 1.31
IRF3-201ENST00000309877 FERMT1Q9BQL6 677 aa23.21■■□□□ 1.31
IRF3-201ENST00000309877 LRRC3Q9BY71 257 aa23.21■■□□□ 1.31
IRF3-201ENST00000309877 ATXN3LQ9H3M9 355 aa23.21■■□□□ 1.31
IRF3-201ENST00000309877 SLC28A3Q9HAS3 691 aa23.21■■□□□ 1.31
IRF3-201ENST00000309877 USP29Q9HBJ7 922 aa23.21■■□□□ 1.31
IRF3-201ENST00000309877 ZDHHC18Q9NUE0 388 aa23.21■■□□□ 1.31
IRF3-201ENST00000309877 ZNF446Q9NWS9 450 aa23.21■■□□□ 1.31
IRF3-201ENST00000309877 MTRF1LQ9UGC7 380 aaKnown RBP23.21■■□□□ 1.31
IRF3-201ENST00000309877 ANAPC5Q9UJX4 755 aa23.21■■□□□ 1.31
IRF3-201ENST00000309877 NEU3Q9UQ49 428 aa23.21■■□□□ 1.31
IRF3-201ENST00000309877 GBF1Q92538 1859 aa23.2■■□□□ 1.31
IRF3-201ENST00000309877 NCAM2O15394 837 aa23.2■■□□□ 1.3
IRF3-201ENST00000309877 CAV1Q03135 178 aa23.2■■□□□ 1.3
IRF3-201ENST00000309877 IZUMO3Q5VZ72 239 aa23.2■■□□□ 1.3
IRF3-201ENST00000309877 TXNDC8Q6A555 127 aa23.2■■□□□ 1.3
IRF3-201ENST00000309877 HEATR6Q6AI08 1181 aaKnown RBP23.2■■□□□ 1.3
IRF3-201ENST00000309877 ELMSAN1Q6PJG2 1045 aa23.2■■□□□ 1.3
IRF3-201ENST00000309877 ZDHHC24Q6UX98 284 aa23.2■■□□□ 1.3
IRF3-201ENST00000309877 GAREM2Q75VX8 874 aa23.2■■□□□ 1.3
IRF3-201ENST00000309877 RBM23Q86U06 439 aaKnown RBP23.2■■□□□ 1.3
IRF3-201ENST00000309877 CHSY1Q86X52 802 aa23.2■■□□□ 1.3
IRF3-201ENST00000309877 NETO2Q8NC67 525 aa23.2■■□□□ 1.3
IRF3-201ENST00000309877 FBXO25Q8TCJ0 367 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms