RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 DDX56Q9NY93 547 aaKnown RBP13.01□□□□□ -0.33
RETREG3-201ENST00000309428 SYNPO2Q9UMS6 1093 aa13.01□□□□□ -0.33
RETREG3-201ENST00000309428 NOD1Q9Y239 953 aa13.01□□□□□ -0.33
RETREG3-201ENST00000309428 MAP3K13O43283 966 aa13.01□□□□□ -0.33
RETREG3-201ENST00000309428 MCF2P10911 925 aa13.01□□□□□ -0.33
RETREG3-201ENST00000309428 AVPR1AP37288 418 aa13.01□□□□□ -0.33
RETREG3-201ENST00000309428 SNRPFP62306 86 aaKnown RBP13.01□□□□□ -0.33
RETREG3-201ENST00000309428 ARFGAP1Q8N6T3 406 aa13.01□□□□□ -0.33
RETREG3-201ENST00000309428 RHOBTB2Q9BYZ6 727 aa13.01□□□□□ -0.33
RETREG3-201ENST00000309428 FOXP3Q9BZS1 431 aa13.01□□□□□ -0.33
RETREG3-201ENST00000309428 UBE2OQ9C0C9 1292 aaKnown RBP13.01□□□□□ -0.33
RETREG3-201ENST00000309428 PHACTR1Q9C0D0 580 aa13.01□□□□□ -0.33
RETREG3-201ENST00000309428 PRMT7Q9NVM4 692 aaPredicted RBP13.01□□□□□ -0.33
RETREG3-201ENST00000309428 STX18Q9P2W9 335 aaKnown RBP13.01□□□□□ -0.33
RETREG3-201ENST00000309428 LRRC42Q9Y546 428 aa13.01□□□□□ -0.33
RETREG3-201ENST00000309428 M0QYT0 321 aa13.01□□□□□ -0.33
RETREG3-201ENST00000309428 TM9SF1O15321 606 aa13.01□□□□□ -0.33
RETREG3-201ENST00000309428 AKAP10O43572 662 aa13.01□□□□□ -0.33
RETREG3-201ENST00000309428 CCNB1P14635 433 aa13.01□□□□□ -0.33
RETREG3-201ENST00000309428 AQP4P55087 323 aa13.01□□□□□ -0.33
RETREG3-201ENST00000309428 CDCA2Q69YH5 1023 aaPredicted RBP13.01□□□□□ -0.33
RETREG3-201ENST00000309428 KCNT2Q6UVM3 1135 aa13.01□□□□□ -0.33
RETREG3-201ENST00000309428 ZPBP2Q6X784 338 aa13.01□□□□□ -0.33
RETREG3-201ENST00000309428 ZNF513Q8N8E2 541 aaPredicted RBP13.01□□□□□ -0.33
RETREG3-201ENST00000309428 GPRC5AQ8NFJ5 357 aa13.01□□□□□ -0.33
RETREG3-201ENST00000309428 FBXO27Q8NI29 283 aa13.01□□□□□ -0.33
RETREG3-201ENST00000309428 SERAC1Q96JX3 654 aa13.01□□□□□ -0.33
RETREG3-201ENST00000309428 CDRT15Q96T59 188 aa13.01□□□□□ -0.33
RETREG3-201ENST00000309428 CCDC134Q9H6E4 229 aa13.01□□□□□ -0.33
RETREG3-201ENST00000309428 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.01□□□□□ -0.33
RETREG3-201ENST00000309428 WDR27A2RRH5 827 aa13□□□□□ -0.33
RETREG3-201ENST00000309428 CXorf49A8MYA2 514 aaPredicted RBP13□□□□□ -0.33
RETREG3-201ENST00000309428 CYP2F1P24903 491 aa13□□□□□ -0.33
RETREG3-201ENST00000309428 GNL1P36915 607 aaPredicted RBP13□□□□□ -0.33
RETREG3-201ENST00000309428 ETFBP38117 255 aa13□□□□□ -0.33
RETREG3-201ENST00000309428 ADARP55265 1226 aaKnown RBP13□□□□□ -0.33
RETREG3-201ENST00000309428 GPX6P59796 221 aa13□□□□□ -0.33
RETREG3-201ENST00000309428 CDC16Q13042 620 aa13□□□□□ -0.33
RETREG3-201ENST00000309428 ATP1A4Q13733 1029 aa13□□□□□ -0.33
RETREG3-201ENST00000309428 SCN4BQ8IWT1 228 aa13□□□□□ -0.33
RETREG3-201ENST00000309428 ZNF786Q8N393 782 aa13□□□□□ -0.33
RETREG3-201ENST00000309428 AZIN2Q96A70 460 aa13□□□□□ -0.33
RETREG3-201ENST00000309428 CMTM5Q96DZ9 223 aa13□□□□□ -0.33
RETREG3-201ENST00000309428 ANKRD27Q96NW4 1050 aa13□□□□□ -0.33
RETREG3-201ENST00000309428 DMAP1Q9NPF5 467 aaPredicted RBP13□□□□□ -0.33
RETREG3-201ENST00000309428 MAP3K20Q9NYL2 800 aaKnown RBP13□□□□□ -0.33
RETREG3-201ENST00000309428 SLC7A8Q9UHI5 535 aa13□□□□□ -0.33
RETREG3-201ENST00000309428 GRID1Q9ULK0 1009 aa13□□□□□ -0.33
RETREG3-201ENST00000309428 MEIS3P2A8K0S8 358 aa13□□□□□ -0.33
RETREG3-201ENST00000309428 PLOD1Q02809 727 aaPredicted RBP13□□□□□ -0.33
RETREG3-201ENST00000309428 MBTD1Q05BQ5 628 aa13□□□□□ -0.33
RETREG3-201ENST00000309428 PLEKHG4Q58EX7 1191 aa13□□□□□ -0.33
RETREG3-201ENST00000309428 PDPK2PQ6A1A2 396 aa13□□□□□ -0.33
RETREG3-201ENST00000309428 ZBED3Q96IU2 234 aaPredicted RBP13□□□□□ -0.33
RETREG3-201ENST00000309428 TXLNGYQ9BZA5 131 aa13□□□□□ -0.33
RETREG3-201ENST00000309428 PNPOQ9NVS9 261 aa13□□□□□ -0.33
RETREG3-201ENST00000309428 THEGQ9P2T0 379 aa13□□□□□ -0.33
RETREG3-201ENST00000309428 FZD9O00144 591 aa13□□□□□ -0.33
RETREG3-201ENST00000309428 HUS1O60921 280 aa13□□□□□ -0.33
RETREG3-201ENST00000309428 KLF1Q13351 362 aaPredicted RBP13□□□□□ -0.33
RETREG3-201ENST00000309428 C15orf39Q6ZRI6 1047 aa13□□□□□ -0.33
RETREG3-201ENST00000309428 GPC2Q8N158 579 aa13□□□□□ -0.33
RETREG3-201ENST00000309428 DTNBP1Q96EV8 351 aa13□□□□□ -0.33
RETREG3-201ENST00000309428 KCNK16Q96T55 309 aa13□□□□□ -0.33
RETREG3-201ENST00000309428 XYLT2Q9H1B5 865 aa13□□□□□ -0.33
RETREG3-201ENST00000309428 PDLIM7Q9NR12 457 aa13□□□□□ -0.33
RETREG3-201ENST00000309428 NFASCO94856 1347 aa12.99□□□□□ -0.33
RETREG3-201ENST00000309428 RREB1Q92766 1687 aa12.99□□□□□ -0.33
RETREG3-201ENST00000309428 ALOX15BO15296 676 aa12.99□□□□□ -0.33
RETREG3-201ENST00000309428 TP73O15350 636 aa12.99□□□□□ -0.33
RETREG3-201ENST00000309428 POMCP01189 267 aa12.99□□□□□ -0.33
RETREG3-201ENST00000309428 HMBSP08397 361 aa12.99□□□□□ -0.33
RETREG3-201ENST00000309428 T-ENOLP0DO92 83 aa12.99□□□□□ -0.33
RETREG3-201ENST00000309428 EPHX2P34913 555 aa12.99□□□□□ -0.33
RETREG3-201ENST00000309428 CXCR3P49682 368 aa12.99□□□□□ -0.33
RETREG3-201ENST00000309428 CYP1B1Q16678 543 aa12.99□□□□□ -0.33
RETREG3-201ENST00000309428 ILDR2Q71H61 639 aa12.99□□□□□ -0.33
RETREG3-201ENST00000309428 DHDDSQ86SQ9 333 aa12.99□□□□□ -0.33
RETREG3-201ENST00000309428 TRIM74Q86UV6 250 aa12.99□□□□□ -0.33
RETREG3-201ENST00000309428 TRIM73Q86UV7 250 aa12.99□□□□□ -0.33
RETREG3-201ENST00000309428 SLC16A10Q8TF71 515 aa12.99□□□□□ -0.33
RETREG3-201ENST00000309428 CYGBQ8WWM9 190 aa12.99□□□□□ -0.33
RETREG3-201ENST00000309428 ZMAT2Q96NC0 199 aaKnown RBP12.99□□□□□ -0.33
RETREG3-201ENST00000309428 CCDC90BQ9GZT6 254 aa12.99□□□□□ -0.33
RETREG3-201ENST00000309428 PDZD7Q9H5P4 517 aa12.99□□□□□ -0.33
RETREG3-201ENST00000309428 AP4E1Q9UPM8 1137 aa12.99□□□□□ -0.33
RETREG3-201ENST00000309428 MCM3APO60318 1980 aa12.99□□□□□ -0.33
RETREG3-201ENST00000309428 SIGLEC16A6NMB1 481 aa12.99□□□□□ -0.33
RETREG3-201ENST00000309428 WFS1O76024 890 aa12.99□□□□□ -0.33
RETREG3-201ENST00000309428 KLHL2O95198 593 aa12.99□□□□□ -0.33
RETREG3-201ENST00000309428 ERVK-10P10266 1014 aa12.99□□□□□ -0.33
RETREG3-201ENST00000309428 PCSK7Q16549 785 aa12.99□□□□□ -0.33
RETREG3-201ENST00000309428 KIF19Q2TAC6 998 aa12.99□□□□□ -0.33
RETREG3-201ENST00000309428 RNASEH2BQ5TBB1 312 aaKnown RBP12.99□□□□□ -0.33
RETREG3-201ENST00000309428 ASRGL1Q7L266 308 aa12.99□□□□□ -0.33
RETREG3-201ENST00000309428 DEFB106AQ8N104 65 aa12.99□□□□□ -0.33
RETREG3-201ENST00000309428 FAM156AQ8NDB6 213 aa12.99□□□□□ -0.33
RETREG3-201ENST00000309428 CATSPER2Q96P56 530 aa12.99□□□□□ -0.33
RETREG3-201ENST00000309428 PTPRHQ9HD43 1115 aa12.99□□□□□ -0.33
RETREG3-201ENST00000309428 PAIP2BQ9ULR5 123 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms