RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 ARHGEF38Q9NXL2 777 aa20.5■□□□□ 0.87
VEGFB-201ENST00000309422 BCCIPQ9P287 314 aaKnown RBP eCLIP20.5■□□□□ 0.87
VEGFB-201ENST00000309422 CNOT8Q9UFF9 292 aaKnown RBP20.5■□□□□ 0.87
VEGFB-201ENST00000309422 ADAMTS1Q9UHI8 967 aa20.5■□□□□ 0.87
VEGFB-201ENST00000309422 GGA2Q9UJY4 613 aa20.5■□□□□ 0.87
VEGFB-201ENST00000309422 STARD13Q9Y3M8 1113 aa20.5■□□□□ 0.87
VEGFB-201ENST00000309422 ZNF318Q5VUA4 2279 aa20.5■□□□□ 0.87
VEGFB-201ENST00000309422 A0A1B0GVM2 712 aa20.49■□□□□ 0.87
VEGFB-201ENST00000309422 TCAF2A6NFQ2 919 aa20.49■□□□□ 0.87
VEGFB-201ENST00000309422 LUC7L3O95232 432 aaKnown RBP20.49■□□□□ 0.87
VEGFB-201ENST00000309422 PABPC1P11940 636 aaKnown RBP20.49■□□□□ 0.87
VEGFB-201ENST00000309422 NHLH1Q02575 133 aa20.49■□□□□ 0.87
VEGFB-201ENST00000309422 PTP4A2Q12974 167 aa20.49■□□□□ 0.87
VEGFB-201ENST00000309422 TSSK4Q6SA08 328 aa20.49■□□□□ 0.87
VEGFB-201ENST00000309422 FAM131BQ86XD5 332 aa20.49■□□□□ 0.87
VEGFB-201ENST00000309422 CCDC33Q8N5R6 958 aa20.49■□□□□ 0.87
VEGFB-201ENST00000309422 FAM172AQ8WUF8 416 aa20.49■□□□□ 0.87
VEGFB-201ENST00000309422 PRICKLE1Q96MT3 831 aaPredicted RBP20.49■□□□□ 0.87
VEGFB-201ENST00000309422 SEMA4AQ9H3S1 761 aa20.49■□□□□ 0.87
VEGFB-201ENST00000309422 ABCB8Q9NUT2 735 aa20.49■□□□□ 0.87
VEGFB-201ENST00000309422 FBXO10Q9UK96 956 aa20.49■□□□□ 0.87
VEGFB-201ENST00000309422 RAB23Q9ULC3 237 aa20.49■□□□□ 0.87
VEGFB-201ENST00000309422 VANGL2Q9ULK5 521 aa20.49■□□□□ 0.87
VEGFB-201ENST00000309422 PLA2G4CQ9UP65 541 aa20.49■□□□□ 0.87
VEGFB-201ENST00000309422 GOLGA6L6A8MZA4 724 aa20.48■□□□□ 0.87
VEGFB-201ENST00000309422 AKR1B15C9JRZ8 316 aaPredicted RBP20.48■□□□□ 0.87
VEGFB-201ENST00000309422 DDX3XO00571 662 aaKnown RBP eCLIP20.48■□□□□ 0.873e-11■■■■■ 27.3
VEGFB-201ENST00000309422 AKR1B10O60218 316 aa20.48■□□□□ 0.87
VEGFB-201ENST00000309422 MFAP3LO75121 409 aa20.48■□□□□ 0.87
VEGFB-201ENST00000309422 HOXB2P14652 356 aa20.48■□□□□ 0.87
VEGFB-201ENST00000309422 POLR2EP19388 210 aaKnown RBP20.48■□□□□ 0.87
VEGFB-201ENST00000309422 NTSR1P30989 418 aa20.48■□□□□ 0.87
VEGFB-201ENST00000309422 ZNF143P52747 638 aaPredicted RBP20.48■□□□□ 0.87
VEGFB-201ENST00000309422 RPS24P62847 133 aaKnown RBP20.48■□□□□ 0.87
VEGFB-201ENST00000309422 EIF4EBP2Q13542 120 aaPredicted RBP20.48■□□□□ 0.87
VEGFB-201ENST00000309422 AUHQ13825 339 aaKnown RBP20.48■□□□□ 0.87
VEGFB-201ENST00000309422 RNF219Q5W0B1 726 aaPredicted RBP20.48■□□□□ 0.87
VEGFB-201ENST00000309422 HEATR6Q6AI08 1181 aaKnown RBP20.48■□□□□ 0.87
VEGFB-201ENST00000309422 CHST9Q7L1S5 443 aa20.48■□□□□ 0.87
VEGFB-201ENST00000309422 LONP2Q86WA8 852 aa20.48■□□□□ 0.87
VEGFB-201ENST00000309422 JOSD2Q8TAC2 188 aa20.48■□□□□ 0.87
VEGFB-201ENST00000309422 EZH1Q92800 747 aaPredicted RBP20.48■□□□□ 0.87
VEGFB-201ENST00000309422 HHIPQ96QV1 700 aa20.48■□□□□ 0.87
VEGFB-201ENST00000309422 NCAPGQ9BPX3 1015 aa20.48■□□□□ 0.87
VEGFB-201ENST00000309422 CNPY3Q9BT09 278 aa20.48■□□□□ 0.87
VEGFB-201ENST00000309422 ABHD10Q9NUJ1 306 aa20.48■□□□□ 0.87
VEGFB-201ENST00000309422 FAM86C1Q9NVL1 165 aa20.48■□□□□ 0.87
VEGFB-201ENST00000309422 TAS2R14Q9NYV8 317 aa20.48■□□□□ 0.87
VEGFB-201ENST00000309422 KIAA1522Q9P206 1035 aaPredicted RBP20.48■□□□□ 0.87
VEGFB-201ENST00000309422 XPO7Q9UIA9 1087 aaKnown RBP20.48■□□□□ 0.87
VEGFB-201ENST00000309422 HS3ST4Q9Y661 456 aa20.48■□□□□ 0.87
VEGFB-201ENST00000309422 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.47■□□□□ 0.87
VEGFB-201ENST00000309422 TRIM24O15164 1050 aa20.47■□□□□ 0.87
VEGFB-201ENST00000309422 SYNCRIPO60506 623 aaKnown RBP20.47■□□□□ 0.87
VEGFB-201ENST00000309422 CISD3P0C7P0 127 aa20.47■□□□□ 0.87
VEGFB-201ENST00000309422 PSMA2P25787 234 aa20.47■□□□□ 0.87
VEGFB-201ENST00000309422 RFC1P35251 1148 aaPredicted RBP20.47■□□□□ 0.87
VEGFB-201ENST00000309422 ST8SIA6P61647 398 aa20.47■□□□□ 0.87
VEGFB-201ENST00000309422 ZNF177Q13360 481 aaPredicted RBP20.47■□□□□ 0.87
VEGFB-201ENST00000309422 GEN1Q17RS7 908 aa20.47■□□□□ 0.87
VEGFB-201ENST00000309422 C15orf59Q2T9L4 293 aaPredicted RBP20.47■□□□□ 0.87
VEGFB-201ENST00000309422 EFHC2Q5JST6 749 aa20.47■□□□□ 0.87
VEGFB-201ENST00000309422 CFAP52Q8N1V2 620 aa20.47■□□□□ 0.87
VEGFB-201ENST00000309422 IL17RCQ8NAC3 791 aa20.47■□□□□ 0.87
VEGFB-201ENST00000309422 HAPLN3Q96S86 360 aa20.47■□□□□ 0.87
VEGFB-201ENST00000309422 DNAJC7Q99615 494 aa20.47■□□□□ 0.87
VEGFB-201ENST00000309422 RBSNQ9H1K0 784 aa20.47■□□□□ 0.87
VEGFB-201ENST00000309422 ELOVL2Q9NXB9 296 aa20.47■□□□□ 0.87
VEGFB-201ENST00000309422 MYO1AQ9UBC5 1043 aa20.47■□□□□ 0.87
VEGFB-201ENST00000309422 GFRA2O00451 464 aa20.46■□□□□ 0.87
VEGFB-201ENST00000309422 CLDN11O75508 207 aa20.46■□□□□ 0.87
VEGFB-201ENST00000309422 RNF8O76064 485 aa20.46■□□□□ 0.87
VEGFB-201ENST00000309422 GJB6O95452 261 aa20.46■□□□□ 0.87
VEGFB-201ENST00000309422 ADCY5O95622 1261 aa20.46■□□□□ 0.87
VEGFB-201ENST00000309422 HOXA6P31267 233 aa20.46■□□□□ 0.87
VEGFB-201ENST00000309422 HNRNPH3P31942 346 aaKnown RBP20.46■□□□□ 0.87
VEGFB-201ENST00000309422 CNR2P34972 360 aa20.46■□□□□ 0.87
VEGFB-201ENST00000309422 PLA2G5P39877 138 aa20.46■□□□□ 0.87
VEGFB-201ENST00000309422 KIR2DL1P43626 348 aaPredicted RBP20.46■□□□□ 0.87
VEGFB-201ENST00000309422 SGSHP51688 502 aa20.46■□□□□ 0.87
VEGFB-201ENST00000309422 SLC12A1Q13621 1099 aa20.46■□□□□ 0.87
VEGFB-201ENST00000309422 CRY1Q16526 586 aa20.46■□□□□ 0.87
VEGFB-201ENST00000309422 CCDC14Q49A88 953 aa20.46■□□□□ 0.87
VEGFB-201ENST00000309422 CCDC122Q5T0U0 273 aa20.46■□□□□ 0.87
VEGFB-201ENST00000309422 OTUD1Q5VV17 481 aaPredicted RBP20.46■□□□□ 0.87
VEGFB-201ENST00000309422 EGFLAMQ63HQ2 1017 aa20.46■□□□□ 0.87
VEGFB-201ENST00000309422 HGSNATQ68CP4 663 aa20.46■□□□□ 0.87
VEGFB-201ENST00000309422 SCYL2Q6P3W7 929 aa20.46■□□□□ 0.87
VEGFB-201ENST00000309422 PKN3Q6P5Z2 889 aa20.46■□□□□ 0.87
VEGFB-201ENST00000309422 WDR59Q6PJI9 974 aa20.46■□□□□ 0.87
VEGFB-201ENST00000309422 SERPINA13PQ6UXR4 307 aa20.46■□□□□ 0.87
VEGFB-201ENST00000309422 MAML2Q8IZL2 1156 aaPredicted RBP20.46■□□□□ 0.87
VEGFB-201ENST00000309422 PGBD3Q8N328 593 aa20.46■□□□□ 0.87
VEGFB-201ENST00000309422 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.46■□□□□ 0.87
VEGFB-201ENST00000309422 FIBINQ8TAL6 211 aa20.46■□□□□ 0.87
VEGFB-201ENST00000309422 NKD2Q969F2 451 aaPredicted RBP20.46■□□□□ 0.87
VEGFB-201ENST00000309422 CCDC42Q96M95 316 aa20.46■□□□□ 0.87
VEGFB-201ENST00000309422 CCDC163A0A0D9SF12 145 aa20.46■□□□□ 0.87
VEGFB-201ENST00000309422 ATMINO43313 823 aaPredicted RBP20.46■□□□□ 0.87
VEGFB-201ENST00000309422 ASLP04424 464 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms