RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 GRAP2O75791 330 aa20.55■□□□□ 0.88
PDZRN3-202ENST00000308537 ZNF18P17022 549 aa20.55■□□□□ 0.88
PDZRN3-202ENST00000308537 GABRB2P47870 512 aa20.55■□□□□ 0.88
PDZRN3-202ENST00000308537 LMAN2Q12907 356 aa20.55■□□□□ 0.88
PDZRN3-202ENST00000308537 CAMK2GQ13555 558 aaPredicted RBP20.55■□□□□ 0.88
PDZRN3-202ENST00000308537 BYSLQ13895 437 aaKnown RBP20.55■□□□□ 0.88
PDZRN3-202ENST00000308537 RAPGEF1Q13905 1077 aa20.55■□□□□ 0.88
PDZRN3-202ENST00000308537 DCAF6Q58WW2 860 aa20.55■□□□□ 0.88
PDZRN3-202ENST00000308537 FSCBQ5H9T9 825 aa20.55■□□□□ 0.88
PDZRN3-202ENST00000308537 STPG1Q5TH74 334 aa20.55■□□□□ 0.88
PDZRN3-202ENST00000308537 MBLAC2Q68D91 279 aa20.55■□□□□ 0.88
PDZRN3-202ENST00000308537 ARMCX6Q7L4S7 300 aa20.55■□□□□ 0.88
PDZRN3-202ENST00000308537 CYP2U1Q7Z449 544 aa20.55■□□□□ 0.88
PDZRN3-202ENST00000308537 NOP9Q86U38 636 aaKnown RBP20.55■□□□□ 0.88
PDZRN3-202ENST00000308537 AHI1Q8N157 1196 aa20.55■□□□□ 0.88
PDZRN3-202ENST00000308537 C12orf50Q8NA57 414 aaPredicted RBP20.55■□□□□ 0.88
PDZRN3-202ENST00000308537 HJURPQ8NCD3 748 aaPredicted RBP20.55■□□□□ 0.88
PDZRN3-202ENST00000308537 EPS8L1Q8TE68 723 aa20.55■□□□□ 0.88
PDZRN3-202ENST00000308537 STK33Q9BYT3 514 aa20.55■□□□□ 0.88
PDZRN3-202ENST00000308537 VPS16Q9H269 839 aa20.55■□□□□ 0.88
PDZRN3-202ENST00000308537 EVLQ9UI08 416 aaPredicted RBP20.55■□□□□ 0.88
PDZRN3-202ENST00000308537 PILRBQ9UKJ0 227 aa20.55■□□□□ 0.88
PDZRN3-202ENST00000308537 NYNRINQ9P2P1 1898 aaKnown RBP20.55■□□□□ 0.88
PDZRN3-202ENST00000308537 I6L893 689 aaPredicted RBP20.54■□□□□ 0.88
PDZRN3-202ENST00000308537 ZNF217O75362 1048 aa20.54■□□□□ 0.88
PDZRN3-202ENST00000308537 DAB1O75553 588 aa20.54■□□□□ 0.88
PDZRN3-202ENST00000308537 MOCS2O96007 188 aaPredicted RBP20.54■□□□□ 0.88
PDZRN3-202ENST00000308537 IGLV3-19P01714 112 aa20.54■□□□□ 0.88
PDZRN3-202ENST00000308537 ITPKAP23677 461 aa20.54■□□□□ 0.88
PDZRN3-202ENST00000308537 KRT9P35527 623 aa20.54■□□□□ 0.88
PDZRN3-202ENST00000308537 JAM2P57087 298 aa20.54■□□□□ 0.88
PDZRN3-202ENST00000308537 SLC6A3Q01959 620 aa20.54■□□□□ 0.88
PDZRN3-202ENST00000308537 EFHC1Q5JVL4 640 aa20.54■□□□□ 0.88
PDZRN3-202ENST00000308537 ARTNQ5T4W7 220 aa20.54■□□□□ 0.88
PDZRN3-202ENST00000308537 MMS22LQ6ZRQ5 1243 aa20.54■□□□□ 0.88
PDZRN3-202ENST00000308537 CFAP52Q8N1V2 620 aa20.54■□□□□ 0.88
PDZRN3-202ENST00000308537 ZNF366Q8N895 744 aa20.54■□□□□ 0.88
PDZRN3-202ENST00000308537 NT5C3BQ969T7 300 aa20.54■□□□□ 0.88
PDZRN3-202ENST00000308537 TTC17Q96AE7 1141 aa20.54■□□□□ 0.88
PDZRN3-202ENST00000308537 MRGPRX3Q96LB0 322 aa20.54■□□□□ 0.88
PDZRN3-202ENST00000308537 ANLNQ9NQW6 1124 aa20.54■□□□□ 0.88
PDZRN3-202ENST00000308537 TMEM63CQ9P1W3 806 aa20.54■□□□□ 0.88
PDZRN3-202ENST00000308537 NOCTQ9UK39 431 aaKnown RBP20.54■□□□□ 0.88
PDZRN3-202ENST00000308537 ATXN2Q99700 1313 aaKnown RBP20.53■□□□□ 0.88
PDZRN3-202ENST00000308537 CDX4O14627 284 aaPredicted RBP20.53■□□□□ 0.88
PDZRN3-202ENST00000308537 DLDP09622 509 aaKnown RBP20.53■□□□□ 0.88
PDZRN3-202ENST00000308537 TFE3P19532 575 aaPredicted RBP20.53■□□□□ 0.88
PDZRN3-202ENST00000308537 TACR2P21452 398 aa20.53■□□□□ 0.88
PDZRN3-202ENST00000308537 BPIFB4P59827 614 aa20.53■□□□□ 0.88
PDZRN3-202ENST00000308537 IRX4P78413 519 aa20.53■□□□□ 0.88
PDZRN3-202ENST00000308537 RPL6Q02878 288 aaKnown RBP20.53■□□□□ 0.88
PDZRN3-202ENST00000308537 STARD3Q14849 445 aa20.53■□□□□ 0.88
PDZRN3-202ENST00000308537 RAP1GAP2Q684P5 730 aa20.53■□□□□ 0.88
PDZRN3-202ENST00000308537 OR6B2Q6IFH4 312 aa20.53■□□□□ 0.88
PDZRN3-202ENST00000308537 TRNP1Q6NT89 227 aa20.53■□□□□ 0.88
PDZRN3-202ENST00000308537 TMPRSS6Q8IU80 811 aa20.53■□□□□ 0.88
PDZRN3-202ENST00000308537 SYT12Q8IV01 421 aa20.53■□□□□ 0.88
PDZRN3-202ENST00000308537 MFN1Q8IWA4 741 aa20.53■□□□□ 0.88
PDZRN3-202ENST00000308537 DEFB119Q8N690 84 aa20.53■□□□□ 0.88
PDZRN3-202ENST00000308537 PIGKQ92643 395 aa20.53■□□□□ 0.88
PDZRN3-202ENST00000308537 ZNF419Q96HQ0 510 aaPredicted RBP20.53■□□□□ 0.88
PDZRN3-202ENST00000308537 BTN2A3PQ96KV6 586 aa20.53■□□□□ 0.88
PDZRN3-202ENST00000308537 PRDM16Q9HAZ2 1276 aa20.53■□□□□ 0.88
PDZRN3-202ENST00000308537 ITM2CQ9NQX7 267 aa20.53■□□□□ 0.88
PDZRN3-202ENST00000308537 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.53■□□□□ 0.88
PDZRN3-202ENST00000308537 WSB2Q9NYS7 404 aaPredicted RBP20.53■□□□□ 0.88
PDZRN3-202ENST00000308537 STIM2Q9P246 746 aa20.53■□□□□ 0.88
PDZRN3-202ENST00000308537 LIMA1Q9UHB6 759 aaKnown RBP20.53■□□□□ 0.88
PDZRN3-202ENST00000308537 ACACBO00763 2458 aa20.53■□□□□ 0.88
PDZRN3-202ENST00000308537 CHD8Q9HCK8 2581 aa20.52■□□□□ 0.88
PDZRN3-202ENST00000308537 LRRC10BA6NIK2 292 aa20.52■□□□□ 0.88
PDZRN3-202ENST00000308537 MAP3K13O43283 966 aa20.52■□□□□ 0.88
PDZRN3-202ENST00000308537 LUC7L3O95232 432 aaKnown RBP20.52■□□□□ 0.88
PDZRN3-202ENST00000308537 EPHX1P07099 455 aa20.52■□□□□ 0.88
PDZRN3-202ENST00000308537 CHRNB2P17787 502 aa20.52■□□□□ 0.88
PDZRN3-202ENST00000308537 IRAK1P51617 712 aa20.52■□□□□ 0.88
PDZRN3-202ENST00000308537 COPB1P53618 953 aaKnown RBP20.52■□□□□ 0.88
PDZRN3-202ENST00000308537 NOMO3P69849 1222 aa20.52■□□□□ 0.88
PDZRN3-202ENST00000308537 LYSMD4Q5XG99 296 aa20.52■□□□□ 0.88
PDZRN3-202ENST00000308537 SERPINA13PQ6UXR4 307 aa20.52■□□□□ 0.88
PDZRN3-202ENST00000308537 SLC36A4Q6YBV0 504 aa20.52■□□□□ 0.88
PDZRN3-202ENST00000308537 BNIPLQ7Z465 357 aa20.52■□□□□ 0.88
PDZRN3-202ENST00000308537 XYLT1Q86Y38 959 aa20.52■□□□□ 0.88
PDZRN3-202ENST00000308537 NOX5Q96PH1 765 aa20.52■□□□□ 0.88
PDZRN3-202ENST00000308537 NPY6RQ99463 290 aa20.52■□□□□ 0.88
PDZRN3-202ENST00000308537 DDX50Q9BQ39 737 aaKnown RBP20.52■□□□□ 0.88
PDZRN3-202ENST00000308537 EDEM2Q9BV94 578 aa20.52■□□□□ 0.88
PDZRN3-202ENST00000308537 ANO10Q9NW15 660 aa20.52■□□□□ 0.88
PDZRN3-202ENST00000308537 DDIT4Q9NX09 232 aa20.52■□□□□ 0.88
PDZRN3-202ENST00000308537 DOCK4Q8N1I0 1966 aa20.52■□□□□ 0.87
PDZRN3-202ENST00000308537 PCNX2A6NKB5 2137 aa20.51■□□□□ 0.87
PDZRN3-202ENST00000308537 PES1O00541 588 aaKnown RBP20.51■□□□□ 0.87
PDZRN3-202ENST00000308537 AP5Z1O43299 807 aa20.51■□□□□ 0.87
PDZRN3-202ENST00000308537 APOEP02649 317 aa20.51■□□□□ 0.87
PDZRN3-202ENST00000308537 MMEP08473 750 aa20.51■□□□□ 0.87
PDZRN3-202ENST00000308537 TPMTP51580 245 aa20.51■□□□□ 0.87
PDZRN3-202ENST00000308537 CDK17Q00537 523 aa20.51■□□□□ 0.87
PDZRN3-202ENST00000308537 MYL5Q02045 173 aa20.51■□□□□ 0.87
PDZRN3-202ENST00000308537 ZNF33AQ06730 810 aa20.51■□□□□ 0.87
PDZRN3-202ENST00000308537 STX1AQ16623 288 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms