RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 PDCD2Q16342 344 aaPredicted RBP10.96□□□□□ -0.66
SYNPO2-201ENST00000307142 CACHD1Q5VU97 1274 aa10.96□□□□□ -0.66
SYNPO2-201ENST00000307142 C11orf74Q86VG3 221 aa10.96□□□□□ -0.66
SYNPO2-201ENST00000307142 WNT8BQ93098 351 aa10.96□□□□□ -0.66
SYNPO2-201ENST00000307142 MRPL1Q9BYD6 325 aaKnown RBP10.96□□□□□ -0.66
SYNPO2-201ENST00000307142 FOXP3Q9BZS1 431 aa10.96□□□□□ -0.66
SYNPO2-201ENST00000307142 TCP11X1B4DZS4 312 aa10.96□□□□□ -0.66
SYNPO2-201ENST00000307142 SMARCB1Q12824 385 aa10.96□□□□□ -0.66
SYNPO2-201ENST00000307142 ZC3H12BQ5HYM0 836 aaKnown RBP10.96□□□□□ -0.66
SYNPO2-201ENST00000307142 EFL1Q7Z2Z2 1120 aaKnown RBP10.96□□□□□ -0.66
SYNPO2-201ENST00000307142 KIRREL3Q8IZU9 778 aa10.96□□□□□ -0.66
SYNPO2-201ENST00000307142 ERP44Q9BS26 406 aa10.96□□□□□ -0.66
SYNPO2-201ENST00000307142 WDR41Q9HAD4 459 aa10.96□□□□□ -0.66
SYNPO2-201ENST00000307142 RGS18Q9NS28 235 aa10.96□□□□□ -0.66
SYNPO2-201ENST00000307142 MRPS17Q9Y2R5 130 aaKnown RBP10.96□□□□□ -0.66
SYNPO2-201ENST00000307142 MGAT4DA6NG13 374 aa10.96□□□□□ -0.66
SYNPO2-201ENST00000307142 MYO1GB0I1T2 1018 aa10.96□□□□□ -0.66
SYNPO2-201ENST00000307142 OR4Q2P0C623 313 aa10.96□□□□□ -0.66
SYNPO2-201ENST00000307142 HSPA1AP0DMV8 641 aaKnown RBP10.96□□□□□ -0.66
SYNPO2-201ENST00000307142 HSPA1BP0DMV9 641 aaKnown RBP10.96□□□□□ -0.66
SYNPO2-201ENST00000307142 ZNF7P17097 686 aaPredicted RBP10.96□□□□□ -0.66
SYNPO2-201ENST00000307142 OLFML2BQ68BL8 750 aa10.96□□□□□ -0.66
SYNPO2-201ENST00000307142 TDRD5Q8NAT2 981 aaKnown RBP10.96□□□□□ -0.66
SYNPO2-201ENST00000307142 ZBTB10Q96DT7 871 aa10.96□□□□□ -0.66
SYNPO2-201ENST00000307142 BLOC1S4Q9NUP1 217 aa10.96□□□□□ -0.66
SYNPO2-201ENST00000307142 RBPJLQ9UBG7 517 aa10.96□□□□□ -0.66
SYNPO2-201ENST00000307142 ADAM28Q9UKQ2 775 aa10.96□□□□□ -0.66
SYNPO2-201ENST00000307142 PADI4Q9UM07 663 aa10.96□□□□□ -0.66
SYNPO2-201ENST00000307142 TBC1D4O60343 1298 aa10.95□□□□□ -0.66
SYNPO2-201ENST00000307142 GJB6O95452 261 aa10.95□□□□□ -0.66
SYNPO2-201ENST00000307142 APOA4P06727 396 aa10.95□□□□□ -0.66
SYNPO2-201ENST00000307142 ESRRGP62508 458 aa10.95□□□□□ -0.66
SYNPO2-201ENST00000307142 HTRA3P83110 453 aa10.95□□□□□ -0.66
SYNPO2-201ENST00000307142 PFKPQ01813 784 aa10.95□□□□□ -0.66
SYNPO2-201ENST00000307142 GRAMD4Q6IC98 578 aa10.95□□□□□ -0.66
SYNPO2-201ENST00000307142 TADA3O75528 432 aa10.95□□□□□ -0.66
SYNPO2-201ENST00000307142 TRUB2O95900 331 aaKnown RBP10.95□□□□□ -0.66
SYNPO2-201ENST00000307142 ENO1P06733 434 aaKnown RBP10.95□□□□□ -0.66
SYNPO2-201ENST00000307142 ERVK-21P61565 698 aa10.95□□□□□ -0.66
SYNPO2-201ENST00000307142 KYNUQ16719 465 aa10.95□□□□□ -0.66
SYNPO2-201ENST00000307142 RFX8Q6ZV50 586 aa10.95□□□□□ -0.66
SYNPO2-201ENST00000307142 ETNPPLQ8TBG4 499 aa10.95□□□□□ -0.66
SYNPO2-201ENST00000307142 ZFYVE1Q9HBF4 777 aa10.95□□□□□ -0.66
SYNPO2-201ENST00000307142 CREBZFQ9NS37 354 aa10.95□□□□□ -0.66
SYNPO2-201ENST00000307142 CTNNAL1Q9UBT7 734 aa10.95□□□□□ -0.66
SYNPO2-201ENST00000307142 PTPRJQ12913 1337 aa10.95□□□□□ -0.66
SYNPO2-201ENST00000307142 LOC102724159A0A0B4J2E5 919 aa10.95□□□□□ -0.66
SYNPO2-201ENST00000307142 RNF103-CHMP3A0A140T963 221 aa10.95□□□□□ -0.66
SYNPO2-201ENST00000307142 EVPLLA8MZ36 301 aa10.95□□□□□ -0.66
SYNPO2-201ENST00000307142 ADRB2P07550 413 aa10.95□□□□□ -0.66
SYNPO2-201ENST00000307142 PWP2Q15269 919 aaKnown RBP10.95□□□□□ -0.66
SYNPO2-201ENST00000307142 TOP6BLQ8N6T0 577 aa10.95□□□□□ -0.66
SYNPO2-201ENST00000307142 FBXO36Q8NEA4 188 aa10.95□□□□□ -0.66
SYNPO2-201ENST00000307142 B4GALNT2Q8NHY0 566 aa10.95□□□□□ -0.66
SYNPO2-201ENST00000307142 CXorf40BQ96DE9 158 aa10.95□□□□□ -0.66
SYNPO2-201ENST00000307142 YY1AP1Q9H869 796 aa10.95□□□□□ -0.66
SYNPO2-201ENST00000307142 A0A1W2PQH9 124 aa10.95□□□□□ -0.66
SYNPO2-201ENST00000307142 CCNT2O60583 730 aaKnown RBP10.95□□□□□ -0.66
SYNPO2-201ENST00000307142 CDH16O75309 829 aa10.95□□□□□ -0.66
SYNPO2-201ENST00000307142 KCNK10P57789 538 aa10.95□□□□□ -0.66
SYNPO2-201ENST00000307142 TEDDM1Q5T9Z0 273 aa10.95□□□□□ -0.66
SYNPO2-201ENST00000307142 CFAP52Q8N1V2 620 aa10.95□□□□□ -0.66
SYNPO2-201ENST00000307142 HTR3CQ8WXA8 447 aa10.95□□□□□ -0.66
SYNPO2-201ENST00000307142 WWP1Q9H0M0 922 aa10.95□□□□□ -0.66
SYNPO2-201ENST00000307142 TLL2Q9Y6L7 1015 aa10.95□□□□□ -0.66
SYNPO2-201ENST00000307142 ZNF839A8K0R7 811 aa10.95□□□□□ -0.66
SYNPO2-201ENST00000307142 TIMM44O43615 452 aa10.95□□□□□ -0.66
SYNPO2-201ENST00000307142 PRIM2P49643 509 aa10.95□□□□□ -0.66
SYNPO2-201ENST00000307142 PLIN5Q00G26 463 aa10.95□□□□□ -0.66
SYNPO2-201ENST00000307142 C15orf59Q2T9L4 293 aaPredicted RBP10.95□□□□□ -0.66
SYNPO2-201ENST00000307142 MAGEC3Q8TD91 643 aa10.95□□□□□ -0.66
SYNPO2-201ENST00000307142 ZNF333Q96JL9 665 aa10.95□□□□□ -0.66
SYNPO2-201ENST00000307142 ATP6V1G3Q96LB4 118 aa10.95□□□□□ -0.66
SYNPO2-201ENST00000307142 ZNF556Q9HAH1 456 aa10.95□□□□□ -0.66
SYNPO2-201ENST00000307142 FAM153AQ9UHL3 310 aa10.95□□□□□ -0.66
SYNPO2-201ENST00000307142 DERAQ9Y315 318 aa10.95□□□□□ -0.66
SYNPO2-201ENST00000307142 SLC8A1P32418 973 aa10.94□□□□□ -0.66
SYNPO2-201ENST00000307142 ANXA11P50995 505 aaKnown RBP10.94□□□□□ -0.66
SYNPO2-201ENST00000307142 SNAP47Q5SQN1 464 aa10.94□□□□□ -0.66
SYNPO2-201ENST00000307142 EIF2AQ9BY44 585 aaKnown RBP10.94□□□□□ -0.66
SYNPO2-201ENST00000307142 OXCT2Q9BYC2 517 aaPredicted RBP10.94□□□□□ -0.66
SYNPO2-201ENST00000307142 SYTL2Q9HCH5 934 aa10.94□□□□□ -0.66
SYNPO2-201ENST00000307142 GPAMQ9HCL2 828 aa10.94□□□□□ -0.66
SYNPO2-201ENST00000307142 ERI2A8K979 691 aaKnown RBP10.94□□□□□ -0.66
SYNPO2-201ENST00000307142 NFATC1O95644 943 aa10.94□□□□□ -0.66
SYNPO2-201ENST00000307142 PTPN2P17706 415 aa10.94□□□□□ -0.66
SYNPO2-201ENST00000307142 IL10P22301 178 aa10.94□□□□□ -0.66
SYNPO2-201ENST00000307142 CHI3L2Q15782 390 aa10.94□□□□□ -0.66
SYNPO2-201ENST00000307142 ANKRD52Q8NB46 1076 aa10.94□□□□□ -0.66
SYNPO2-201ENST00000307142 DBF4BQ8NFT6 615 aa10.94□□□□□ -0.66
SYNPO2-201ENST00000307142 RUBCNQ92622 972 aa10.94□□□□□ -0.66
SYNPO2-201ENST00000307142 MIEF1Q9NQG6 463 aa10.94□□□□□ -0.66
SYNPO2-201ENST00000307142 PLAGL2Q9UPG8 496 aa10.94□□□□□ -0.66
SYNPO2-201ENST00000307142 SNX8Q9Y5X2 465 aa10.94□□□□□ -0.66
SYNPO2-201ENST00000307142 EOMESO95936 686 aa10.94□□□□□ -0.66
SYNPO2-201ENST00000307142 MIPP30301 263 aa10.94□□□□□ -0.66
SYNPO2-201ENST00000307142 CD86P42081 329 aa10.94□□□□□ -0.66
SYNPO2-201ENST00000307142 EEF1DP3Q658K8 133 aa10.94□□□□□ -0.66
SYNPO2-201ENST00000307142 C11orf63Q6NUN7 778 aa10.94□□□□□ -0.66
SYNPO2-201ENST00000307142 PRR23BQ6ZRT6 265 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms