RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 HPSEQ9Y251 543 aa8.54□□□□□ -1.04
PCDHB1-201ENST00000306549 GPR25O00155 361 aa8.53□□□□□ -1.04
PCDHB1-201ENST00000306549 RNF103O00237 685 aa8.53□□□□□ -1.04
PCDHB1-201ENST00000306549 MEIS2O14770 477 aa8.53□□□□□ -1.04
PCDHB1-201ENST00000306549 CLTBP09497 229 aa8.53□□□□□ -1.04
PCDHB1-201ENST00000306549 FDPSP14324 419 aaKnown RBP8.53□□□□□ -1.04
PCDHB1-201ENST00000306549 DDX6P26196 483 aaKnown RBP eCLIP8.53□□□□□ -1.04
PCDHB1-201ENST00000306549 NDUFV1P49821 464 aa8.53□□□□□ -1.04
PCDHB1-201ENST00000306549 GALCP54803 685 aa8.53□□□□□ -1.04
PCDHB1-201ENST00000306549 KCNA10Q16322 511 aa8.53□□□□□ -1.04
PCDHB1-201ENST00000306549 FAM83EQ2M2I3 478 aa8.53□□□□□ -1.04
PCDHB1-201ENST00000306549 HEXDCQ8WVB3 486 aa8.53□□□□□ -1.04
PCDHB1-201ENST00000306549 KCNK16Q96T55 309 aa8.53□□□□□ -1.04
PCDHB1-201ENST00000306549 NMRK2Q9NPI5 230 aa8.53□□□□□ -1.04
PCDHB1-201ENST00000306549 ASB3Q9Y575 518 aa8.53□□□□□ -1.04
PCDHB1-201ENST00000306549 INSL6Q9Y581 213 aa8.53□□□□□ -1.04
PCDHB1-201ENST00000306549 SEC16AO15027 2179 aa8.53□□□□□ -1.04
PCDHB1-201ENST00000306549 NFKBIEO00221 500 aa8.53□□□□□ -1.04
PCDHB1-201ENST00000306549 SOCS7O14512 581 aa8.53□□□□□ -1.04
PCDHB1-201ENST00000306549 VPS26AO75436 327 aa8.53□□□□□ -1.04
PCDHB1-201ENST00000306549 MYL4P12829 197 aa8.53□□□□□ -1.04
PCDHB1-201ENST00000306549 NPR3P17342 541 aa8.53□□□□□ -1.04
PCDHB1-201ENST00000306549 PON1P27169 355 aa8.53□□□□□ -1.04
PCDHB1-201ENST00000306549 NEK10Q6ZWH5 1172 aa8.53□□□□□ -1.04
PCDHB1-201ENST00000306549 ACOT1Q86TX2 421 aa8.53□□□□□ -1.04
PCDHB1-201ENST00000306549 NPAS4Q8IUM7 802 aa8.53□□□□□ -1.04
PCDHB1-201ENST00000306549 SENP8Q96LD8 212 aa8.53□□□□□ -1.04
PCDHB1-201ENST00000306549 TMEM237Q96Q45 408 aa8.53□□□□□ -1.04
PCDHB1-201ENST00000306549 FAM105AQ9NUU6 356 aa8.53□□□□□ -1.04
PCDHB1-201ENST00000306549 C1QTNF3-AMACRE9PGA6 284 aa8.53□□□□□ -1.04
PCDHB1-201ENST00000306549 TIMM44O43615 452 aa8.53□□□□□ -1.04
PCDHB1-201ENST00000306549 CDH16O75309 829 aa8.53□□□□□ -1.04
PCDHB1-201ENST00000306549 FAM163BP0C2L3 166 aa8.53□□□□□ -1.04
PCDHB1-201ENST00000306549 SLC7A5Q01650 507 aa8.53□□□□□ -1.04
PCDHB1-201ENST00000306549 KRR1Q13601 381 aaKnown RBP8.53□□□□□ -1.04
PCDHB1-201ENST00000306549 DNAL1Q4LDG9 190 aa8.53□□□□□ -1.04
PCDHB1-201ENST00000306549 INPP5DQ92835 1189 aa8.53□□□□□ -1.04
PCDHB1-201ENST00000306549 CPB2Q96IY4 423 aa8.53□□□□□ -1.04
PCDHB1-201ENST00000306549 ECSITQ9BQ95 431 aa8.53□□□□□ -1.04
PCDHB1-201ENST00000306549 CASTOR2A6NHX0 329 aa8.53□□□□□ -1.04
PCDHB1-201ENST00000306549 SOX6P35712 828 aa8.53□□□□□ -1.04
PCDHB1-201ENST00000306549 MDH1BQ5I0G3 518 aa8.53□□□□□ -1.04
PCDHB1-201ENST00000306549 DENND5BQ6ZUT9 1274 aa8.53□□□□□ -1.04
PCDHB1-201ENST00000306549 COMMD2Q86X83 199 aa8.53□□□□□ -1.04
PCDHB1-201ENST00000306549 ARHGAP39Q9C0H5 1083 aa8.53□□□□□ -1.04
PCDHB1-201ENST00000306549 SCAF8Q9UPN6 1271 aaKnown RBP8.53□□□□□ -1.04
PCDHB1-201ENST00000306549 GRM5P41594 1212 aa8.53□□□□□ -1.04
PCDHB1-201ENST00000306549 C11orf63Q6NUN7 778 aa8.53□□□□□ -1.04
PCDHB1-201ENST00000306549 SV2AQ7L0J3 742 aa8.53□□□□□ -1.04
PCDHB1-201ENST00000306549 CPA6Q8N4T0 437 aa8.53□□□□□ -1.04
PCDHB1-201ENST00000306549 THAP11Q96EK4 314 aa8.53□□□□□ -1.04
PCDHB1-201ENST00000306549 SPACA7Q96KW9 195 aa8.53□□□□□ -1.04
PCDHB1-201ENST00000306549 SERPINB12Q96P63 405 aa8.53□□□□□ -1.04
PCDHB1-201ENST00000306549 PNKPQ96T60 521 aa8.53□□□□□ -1.04
PCDHB1-201ENST00000306549 BBS2Q9BXC9 721 aa8.53□□□□□ -1.04
PCDHB1-201ENST00000306549 KLHL3Q9UH77 587 aa8.53□□□□□ -1.04
PCDHB1-201ENST00000306549 NR2E1Q9Y466 385 aa8.53□□□□□ -1.04
PCDHB1-201ENST00000306549 STON1Q9Y6Q2 735 aa8.53□□□□□ -1.04
PCDHB1-201ENST00000306549 HS6ST1O60243 411 aa8.53□□□□□ -1.04
PCDHB1-201ENST00000306549 MTRF1O75570 445 aaKnown RBP8.53□□□□□ -1.04
PCDHB1-201ENST00000306549 PCDH8O95206 1070 aa8.53□□□□□ -1.04
PCDHB1-201ENST00000306549 IGFBP4P22692 258 aa8.53□□□□□ -1.04
PCDHB1-201ENST00000306549 LSP1P33241 339 aa8.53□□□□□ -1.04
PCDHB1-201ENST00000306549 SGO1Q5FBB7 561 aa8.53□□□□□ -1.04
PCDHB1-201ENST00000306549 SUSD6Q92537 303 aa8.53□□□□□ -1.04
PCDHB1-201ENST00000306549 OLFM1Q99784 485 aa8.53□□□□□ -1.04
PCDHB1-201ENST00000306549 FAM167BQ9BTA0 163 aa8.53□□□□□ -1.04
PCDHB1-201ENST00000306549 ATXN3LQ9H3M9 355 aa8.53□□□□□ -1.04
PCDHB1-201ENST00000306549 TLE6Q9H808 572 aa8.53□□□□□ -1.04
PCDHB1-201ENST00000306549 RAB6BQ9NRW1 208 aa8.53□□□□□ -1.04
PCDHB1-201ENST00000306549 CTNNAL1Q9UBT7 734 aa8.53□□□□□ -1.04
PCDHB1-201ENST00000306549 TMCO1Q9UM00 188 aa8.53□□□□□ -1.04
PCDHB1-201ENST00000306549 CDY1Q9Y6F8 540 aa8.53□□□□□ -1.04
PCDHB1-201ENST00000306549 YDJCA8MPS7 323 aa8.52□□□□□ -1.04
PCDHB1-201ENST00000306549 INHAP05111 366 aa8.52□□□□□ -1.04
PCDHB1-201ENST00000306549 NOS2P35228 1153 aa8.52□□□□□ -1.04
PCDHB1-201ENST00000306549 ATAD3BQ5T9A4 648 aa8.52□□□□□ -1.04
PCDHB1-201ENST00000306549 DENND6AQ8IWF6 608 aa8.52□□□□□ -1.04
PCDHB1-201ENST00000306549 C12orf56Q8IXR9 622 aa8.52□□□□□ -1.04
PCDHB1-201ENST00000306549 CNGB3Q9NQW8 809 aa8.52□□□□□ -1.04
PCDHB1-201ENST00000306549 ANAPC2Q9UJX6 822 aa8.52□□□□□ -1.04
PCDHB1-201ENST00000306549 MAPRE3Q9UPY8 281 aa8.52□□□□□ -1.04
PCDHB1-201ENST00000306549 COQ6Q9Y2Z9 468 aa8.52□□□□□ -1.04
PCDHB1-201ENST00000306549 ZNF862O60290 1169 aa8.52□□□□□ -1.05
PCDHB1-201ENST00000306549 KLHL2O95198 593 aa8.52□□□□□ -1.05
PCDHB1-201ENST00000306549 RGS7P49802 495 aa8.52□□□□□ -1.05
PCDHB1-201ENST00000306549 SNRPD1P62314 119 aaKnown RBP8.52□□□□□ -1.05
PCDHB1-201ENST00000306549 LYPLAL1Q5VWZ2 237 aa8.52□□□□□ -1.05
PCDHB1-201ENST00000306549 LRRC40Q9H9A6 602 aa8.52□□□□□ -1.05
PCDHB1-201ENST00000306549 AVENQ9NQS1 362 aaPredicted RBP8.52□□□□□ -1.05
PCDHB1-201ENST00000306549 ST3GAL5Q9UNP4 418 aa8.52□□□□□ -1.05
PCDHB1-201ENST00000306549 CFAP73A6NFT4 308 aa8.52□□□□□ -1.05
PCDHB1-201ENST00000306549 MGAT4DA6NG13 374 aa8.52□□□□□ -1.05
PCDHB1-201ENST00000306549 TRPC5OSA6NMA1 111 aa8.52□□□□□ -1.05
PCDHB1-201ENST00000306549 DNM1LO00429 736 aa8.52□□□□□ -1.05
PCDHB1-201ENST00000306549 CXCL8P10145 99 aa8.52□□□□□ -1.05
PCDHB1-201ENST00000306549 ITGALP20701 1170 aa8.52□□□□□ -1.05
PCDHB1-201ENST00000306549 TKTL1P51854 596 aa8.52□□□□□ -1.05
PCDHB1-201ENST00000306549 PURAQ00577 322 aaKnown RBP8.52□□□□□ -1.05
PCDHB1-201ENST00000306549 CLEC16AQ2KHT3 1053 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms