RNA–Protein interactions for RNA: ENST00000305366.7

TM4SF1-201, Transcript of transmembrane 4 L six family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM4SF1, Length 1,771 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-201ENST00000305366 WDR87Q6ZQQ6 2873 aa8.14□□□□□ -1.11
TM4SF1-201ENST00000305366 GVINP1Q7Z2Y8 2422 aa8.13□□□□□ -1.11
TM4SF1-201ENST00000305366 SPTBN4Q9H254 2564 aa8.13□□□□□ -1.11
TM4SF1-201ENST00000305366 DCDC2BA2VCK2 349 aa8.13□□□□□ -1.11
TM4SF1-201ENST00000305366 MTMR11A4FU01 709 aa8.13□□□□□ -1.11
TM4SF1-201ENST00000305366 CHURC1-FNTBB4DL54 471 aa8.13□□□□□ -1.11
TM4SF1-201ENST00000305366 CYB561D2O14569 222 aa8.13□□□□□ -1.11
TM4SF1-201ENST00000305366 MICAL2O94851 1124 aa8.13□□□□□ -1.11
TM4SF1-201ENST00000305366 TTC4O95801 387 aa8.13□□□□□ -1.11
TM4SF1-201ENST00000305366 ODC1P11926 461 aa8.13□□□□□ -1.11
TM4SF1-201ENST00000305366 CYP3A5P20815 502 aa8.13□□□□□ -1.11
TM4SF1-201ENST00000305366 CXCL12P48061 93 aa8.13□□□□□ -1.11
TM4SF1-201ENST00000305366 FNTBP49356 437 aa8.13□□□□□ -1.11
TM4SF1-201ENST00000305366 ZNF132P52740 706 aa8.13□□□□□ -1.11
TM4SF1-201ENST00000305366 WNT7BP56706 349 aa8.13□□□□□ -1.11
TM4SF1-201ENST00000305366 TNK2Q07912 1038 aa8.13□□□□□ -1.11
TM4SF1-201ENST00000305366 SPEM2Q0P670 501 aa8.13□□□□□ -1.11
TM4SF1-201ENST00000305366 PLD1Q13393 1074 aa8.13□□□□□ -1.11
TM4SF1-201ENST00000305366 PDAP1Q13442 181 aaKnown RBP8.13□□□□□ -1.11
TM4SF1-201ENST00000305366 TMEM132DQ14C87 1099 aa8.13□□□□□ -1.11
TM4SF1-201ENST00000305366 CNGA2Q16280 664 aa8.13□□□□□ -1.11
TM4SF1-201ENST00000305366 ARHGAP15Q53QZ3 475 aa8.13□□□□□ -1.11
TM4SF1-201ENST00000305366 RNF187Q5TA31 235 aaPredicted RBP8.13□□□□□ -1.11
TM4SF1-201ENST00000305366 Q6ZS52 159 aa8.13□□□□□ -1.11
TM4SF1-201ENST00000305366 GAREM2Q75VX8 874 aa8.13□□□□□ -1.11
TM4SF1-201ENST00000305366 PIGWQ7Z7B1 504 aa8.13□□□□□ -1.11
TM4SF1-201ENST00000305366 METTL23Q86XA0 190 aa8.13□□□□□ -1.11
TM4SF1-201ENST00000305366 UBR7Q8N806 425 aa8.13□□□□□ -1.11
TM4SF1-201ENST00000305366 CCDC89Q8N998 374 aa8.13□□□□□ -1.11
TM4SF1-201ENST00000305366 STKLD1Q8NE28 680 aa8.13□□□□□ -1.11
TM4SF1-201ENST00000305366 OR10T2Q8NGX3 314 aa8.13□□□□□ -1.11
TM4SF1-201ENST00000305366 EXD1Q8NHP7 514 aa8.13□□□□□ -1.11
TM4SF1-201ENST00000305366 EPS8L3Q8TE67 593 aaKnown RBP8.13□□□□□ -1.11
TM4SF1-201ENST00000305366 DEPDC1BQ8WUY9 529 aa8.13□□□□□ -1.11
TM4SF1-201ENST00000305366 C1orf54Q8WWF1 131 aa8.13□□□□□ -1.11
TM4SF1-201ENST00000305366 CPA5Q8WXQ8 436 aa8.13□□□□□ -1.11
TM4SF1-201ENST00000305366 LRRC3BQ96PB8 259 aa8.13□□□□□ -1.11
TM4SF1-201ENST00000305366 SELENOSQ9BQE4 189 aa8.13□□□□□ -1.11
TM4SF1-201ENST00000305366 TRIM7Q9C029 511 aa8.13□□□□□ -1.11
TM4SF1-201ENST00000305366 APOBEC3GQ9HC16 384 aaKnown RBP8.13□□□□□ -1.11
TM4SF1-201ENST00000305366 INTS9Q9NV88 658 aaKnown RBP8.13□□□□□ -1.11
TM4SF1-201ENST00000305366 ABI2Q9NYB9 513 aaPredicted RBP8.13□□□□□ -1.11
TM4SF1-201ENST00000305366 RBAKQ9NYW8 714 aaPredicted RBP8.13□□□□□ -1.11
TM4SF1-201ENST00000305366 ADAM22Q9P0K1 906 aa8.13□□□□□ -1.11
TM4SF1-201ENST00000305366 ASIC3Q9UHC3 531 aa8.13□□□□□ -1.11
TM4SF1-201ENST00000305366 GMEB2Q9UKD1 530 aa8.13□□□□□ -1.11
TM4SF1-201ENST00000305366 TPX2Q9ULW0 747 aaKnown RBP8.13□□□□□ -1.11
TM4SF1-201ENST00000305366 GPR179Q6PRD1 2367 aa8.13□□□□□ -1.11
TM4SF1-201ENST00000305366 GOLGA6L7A0A1B0GV03 622 aa8.12□□□□□ -1.11
TM4SF1-201ENST00000305366 CFAP69A5D8W1 941 aa8.12□□□□□ -1.11
TM4SF1-201ENST00000305366 RASSF9O75901 435 aa8.12□□□□□ -1.11
TM4SF1-201ENST00000305366 CHRNB1P11230 501 aa8.12□□□□□ -1.11
TM4SF1-201ENST00000305366 GNA15P30679 374 aa8.12□□□□□ -1.11
TM4SF1-201ENST00000305366 HNRNPH1P31943 449 aaKnown RBP8.12□□□□□ -1.11
TM4SF1-201ENST00000305366 PXNP49023 591 aaPredicted RBP8.12□□□□□ -1.11
TM4SF1-201ENST00000305366 ITGA8P53708 1063 aa8.12□□□□□ -1.11
TM4SF1-201ENST00000305366 NOP14P78316 857 aaKnown RBP8.12□□□□□ -1.11
TM4SF1-201ENST00000305366 LMNB2Q03252 620 aa8.12□□□□□ -1.11
TM4SF1-201ENST00000305366 MAMLD1Q13495 774 aa8.12□□□□□ -1.11
TM4SF1-201ENST00000305366 GAS6Q14393 721 aa8.12□□□□□ -1.11
TM4SF1-201ENST00000305366 PON2Q15165 354 aa8.12□□□□□ -1.11
TM4SF1-201ENST00000305366 KYAT1Q16773 422 aa8.12□□□□□ -1.11
TM4SF1-201ENST00000305366 ANKRD20A8PQ5CZ79 823 aa8.12□□□□□ -1.11
TM4SF1-201ENST00000305366 UBAP2Q5T6F2 1119 aaKnown RBP8.12□□□□□ -1.11
TM4SF1-201ENST00000305366 LRRC38Q5VT99 294 aa8.12□□□□□ -1.11
TM4SF1-201ENST00000305366 SDHAF4Q5VUM1 108 aa8.12□□□□□ -1.11
TM4SF1-201ENST00000305366 WSCD1Q658N2 575 aa8.12□□□□□ -1.11
TM4SF1-201ENST00000305366 ICE2Q659A1 982 aa8.12□□□□□ -1.11
TM4SF1-201ENST00000305366 DRICH1Q6PGQ1 229 aaPredicted RBP8.12□□□□□ -1.11
TM4SF1-201ENST00000305366 LRRTM3Q86VH5 581 aa8.12□□□□□ -1.11
TM4SF1-201ENST00000305366 EXOC3L1Q86VI1 746 aa8.12□□□□□ -1.11
TM4SF1-201ENST00000305366 TMC8Q8IU68 726 aa8.12□□□□□ -1.11
TM4SF1-201ENST00000305366 CCDC13Q8IYE1 715 aa8.12□□□□□ -1.11
TM4SF1-201ENST00000305366 THEM5Q8N1Q8 247 aa8.12□□□□□ -1.11
TM4SF1-201ENST00000305366 LEMD2Q8NC56 503 aa8.12□□□□□ -1.11
TM4SF1-201ENST00000305366 ZBTB44Q8NCP5 570 aa8.12□□□□□ -1.11
TM4SF1-201ENST00000305366 CCDC197Q8NCU1 140 aa8.12□□□□□ -1.11
TM4SF1-201ENST00000305366 CCHCR1Q8TD31 782 aa8.12□□□□□ -1.11
TM4SF1-201ENST00000305366 CCT6BQ92526 530 aa8.12□□□□□ -1.11
TM4SF1-201ENST00000305366 FAM84AQ96KN4 292 aa8.12□□□□□ -1.11
TM4SF1-201ENST00000305366 HERPUD2Q9BSE4 406 aa8.12□□□□□ -1.11
TM4SF1-201ENST00000305366 LRRC3Q9BY71 257 aa8.12□□□□□ -1.11
TM4SF1-201ENST00000305366 OSBPL8Q9BZF1 889 aa8.12□□□□□ -1.11
TM4SF1-201ENST00000305366 NSRP1Q9H0G5 558 aaKnown RBP8.12□□□□□ -1.11
TM4SF1-201ENST00000305366 CHRDQ9H2X0 955 aa8.12□□□□□ -1.11
TM4SF1-201ENST00000305366 C2orf42Q9NWW7 574 aa8.12□□□□□ -1.11
TM4SF1-201ENST00000305366 DPP3Q9NY33 737 aa8.12□□□□□ -1.11
TM4SF1-201ENST00000305366 IP6K2Q9UHH9 426 aa8.12□□□□□ -1.11
TM4SF1-201ENST00000305366 LGALS13Q9UHV8 139 aa8.12□□□□□ -1.11
TM4SF1-201ENST00000305366 CPSF3Q9UKF6 684 aaKnown RBP8.12□□□□□ -1.11
TM4SF1-201ENST00000305366 MAFFQ9ULX9 164 aa8.12□□□□□ -1.11
TM4SF1-201ENST00000305366 MAGED2Q9UNF1 606 aaPredicted RBP8.12□□□□□ -1.11
TM4SF1-201ENST00000305366 PCDHB4Q9Y5E5 795 aa8.12□□□□□ -1.11
TM4SF1-201ENST00000305366 DENND4AQ7Z401 1863 aa8.12□□□□□ -1.11
TM4SF1-201ENST00000305366 PTPRJQ12913 1337 aa8.12□□□□□ -1.11
TM4SF1-201ENST00000305366 H0YHG0 523 aa8.12□□□□□ -1.11
TM4SF1-201ENST00000305366 HRO43593 1189 aa8.12□□□□□ -1.11
TM4SF1-201ENST00000305366 FAM189A1O60320 539 aa8.12□□□□□ -1.11
TM4SF1-201ENST00000305366 LSM8O95777 96 aaKnown RBP8.12□□□□□ -1.11
TM4SF1-201ENST00000305366 CALCAP01258 141 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms