RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 UNC5BQ8IZJ1 945 aa13.36□□□□□ -0.27
TRIM35-201ENST00000305364 SIX6OS1Q8N1H7 587 aa13.36□□□□□ -0.27
TRIM35-201ENST00000305364 NSUN6Q8TEA1 469 aaKnown RBP13.36□□□□□ -0.27
TRIM35-201ENST00000305364 DLG3Q92796 817 aa13.36□□□□□ -0.27
TRIM35-201ENST00000305364 PRICKLE1Q96MT3 831 aaPredicted RBP13.36□□□□□ -0.27
TRIM35-201ENST00000305364 DHX33Q9H6R0 707 aaKnown RBP13.36□□□□□ -0.27
TRIM35-201ENST00000305364 SCAF8Q9UPN6 1271 aaKnown RBP13.36□□□□□ -0.27
TRIM35-201ENST00000305364 SPATA31A5Q5VU36 1347 aa13.36□□□□□ -0.27
TRIM35-201ENST00000305364 SPATA31A7Q8IWB4 1347 aa13.36□□□□□ -0.27
TRIM35-201ENST00000305364 E7ESA3 106 aa13.36□□□□□ -0.27
TRIM35-201ENST00000305364 GMNNO75496 209 aa13.36□□□□□ -0.27
TRIM35-201ENST00000305364 PIGNO95427 931 aa13.36□□□□□ -0.27
TRIM35-201ENST00000305364 XRCC1P18887 633 aaPredicted RBP13.36□□□□□ -0.27
TRIM35-201ENST00000305364 THOP1P52888 689 aa13.36□□□□□ -0.27
TRIM35-201ENST00000305364 PGM5Q15124 567 aa13.36□□□□□ -0.27
TRIM35-201ENST00000305364 GLRA4Q5JXX5 417 aa13.36□□□□□ -0.27
TRIM35-201ENST00000305364 TATDN1Q6P1N9 297 aa13.36□□□□□ -0.27
TRIM35-201ENST00000305364 SHKBP1Q8TBC3 707 aa13.36□□□□□ -0.27
TRIM35-201ENST00000305364 RMI1Q9H9A7 625 aa13.36□□□□□ -0.27
TRIM35-201ENST00000305364 C1orf232A0A0U1RR37 186 aa13.35□□□□□ -0.27
TRIM35-201ENST00000305364 BOLA2-SMG1P6H3BVE0 249 aa13.35□□□□□ -0.27
TRIM35-201ENST00000305364 BUD23O43709 281 aaKnown RBP13.35□□□□□ -0.27
TRIM35-201ENST00000305364 DNAJA2O60884 412 aa13.35□□□□□ -0.27
TRIM35-201ENST00000305364 CCNE2O96020 404 aa13.35□□□□□ -0.27
TRIM35-201ENST00000305364 ACO1P21399 889 aaKnown RBP13.35□□□□□ -0.27
TRIM35-201ENST00000305364 AVPR1AP37288 418 aa13.35□□□□□ -0.27
TRIM35-201ENST00000305364 GP5P40197 560 aa13.35□□□□□ -0.27
TRIM35-201ENST00000305364 MSLNQ13421 630 aaPredicted RBP13.35□□□□□ -0.27
TRIM35-201ENST00000305364 PDK2Q15119 407 aa13.35□□□□□ -0.27
TRIM35-201ENST00000305364 NEDD8Q15843 81 aa13.35□□□□□ -0.27
TRIM35-201ENST00000305364 RSBN1LQ6PCB5 846 aaPredicted RBP13.35□□□□□ -0.27
TRIM35-201ENST00000305364 KCNT2Q6UVM3 1135 aa13.35□□□□□ -0.27
TRIM35-201ENST00000305364 ZNF781Q8N8C0 355 aa13.35□□□□□ -0.27
TRIM35-201ENST00000305364 FAM47BQ8NA70 645 aa13.35□□□□□ -0.27
TRIM35-201ENST00000305364 TFAP2BQ92481 460 aa13.35□□□□□ -0.27
TRIM35-201ENST00000305364 HDAC11Q96DB2 347 aa13.35□□□□□ -0.27
TRIM35-201ENST00000305364 CIB1Q99828 191 aa13.35□□□□□ -0.27
TRIM35-201ENST00000305364 USP29Q9HBJ7 922 aa13.35□□□□□ -0.27
TRIM35-201ENST00000305364 TMEM216Q9P0N5 145 aa13.35□□□□□ -0.27
TRIM35-201ENST00000305364 COPG2Q9UBF2 871 aa13.35□□□□□ -0.27
TRIM35-201ENST00000305364 PCDHA11Q9Y5I1 949 aa13.35□□□□□ -0.27
TRIM35-201ENST00000305364 CBFA2T3O75081 653 aa13.35□□□□□ -0.27
TRIM35-201ENST00000305364 TNFSF9P41273 254 aa13.35□□□□□ -0.27
TRIM35-201ENST00000305364 GRIA2P42262 883 aa13.35□□□□□ -0.27
TRIM35-201ENST00000305364 MRPS5P82675 430 aaKnown RBP13.35□□□□□ -0.27
TRIM35-201ENST00000305364 DGKDQ16760 1214 aa13.35□□□□□ -0.27
TRIM35-201ENST00000305364 PACS1Q6VY07 963 aa13.35□□□□□ -0.27
TRIM35-201ENST00000305364 NUP93Q8N1F7 819 aa13.35□□□□□ -0.27
TRIM35-201ENST00000305364 DCPSQ96C86 337 aaKnown RBP13.35□□□□□ -0.27
TRIM35-201ENST00000305364 CPXM1Q96SM3 734 aa13.35□□□□□ -0.27
TRIM35-201ENST00000305364 ARHGEF4Q9NR80 690 aa13.35□□□□□ -0.27
TRIM35-201ENST00000305364 ZNF358Q9NW07 568 aa13.35□□□□□ -0.27
TRIM35-201ENST00000305364 A0A087WXM4 84 aa13.35□□□□□ -0.27
TRIM35-201ENST00000305364 LYPLA2O95372 231 aa13.35□□□□□ -0.27
TRIM35-201ENST00000305364 MT-CO1P00395 513 aa13.35□□□□□ -0.27
TRIM35-201ENST00000305364 PRKCBP05771 671 aa13.35□□□□□ -0.27
TRIM35-201ENST00000305364 CYP2F1P24903 491 aa13.35□□□□□ -0.27
TRIM35-201ENST00000305364 NAGLUP54802 743 aa13.35□□□□□ -0.27
TRIM35-201ENST00000305364 IGBP1P78318 339 aa13.35□□□□□ -0.27
TRIM35-201ENST00000305364 PTPN11Q06124 597 aaPredicted RBP13.35□□□□□ -0.27
TRIM35-201ENST00000305364 MAPRE2Q15555 327 aa13.35□□□□□ -0.27
TRIM35-201ENST00000305364 CCDC153Q494R4 210 aa13.35□□□□□ -0.27
TRIM35-201ENST00000305364 DALRD3Q5D0E6 543 aaKnown RBP13.35□□□□□ -0.27
TRIM35-201ENST00000305364 FBXL19Q6PCT2 694 aa13.35□□□□□ -0.27
TRIM35-201ENST00000305364 UGT2A3Q6UWM9 527 aa13.35□□□□□ -0.27
TRIM35-201ENST00000305364 FBXL18Q96ME1 805 aa13.35□□□□□ -0.27
TRIM35-201ENST00000305364 IDI2Q9BXS1 227 aa13.35□□□□□ -0.27
TRIM35-201ENST00000305364 CDH19Q9H159 772 aa13.35□□□□□ -0.27
TRIM35-201ENST00000305364 DNAJC28Q9NX36 388 aa13.35□□□□□ -0.27
TRIM35-201ENST00000305364 COL20A1Q9P218 1284 aa13.35□□□□□ -0.27
TRIM35-201ENST00000305364 UBIAD1Q9Y5Z9 338 aa13.35□□□□□ -0.27
TRIM35-201ENST00000305364 ANKRD36CQ5JPF3 1778 aa13.35□□□□□ -0.27
TRIM35-201ENST00000305364 SF3B1O75533 1304 aaKnown RBP eCLIP13.35□□□□□ -0.27
TRIM35-201ENST00000305364 SLC15A5A6NIM6 579 aa13.34□□□□□ -0.27
TRIM35-201ENST00000305364 PDLIM1O00151 329 aa13.34□□□□□ -0.27
TRIM35-201ENST00000305364 TFAP2AP05549 437 aa13.34□□□□□ -0.27
TRIM35-201ENST00000305364 CDK4P11802 303 aa13.34□□□□□ -0.27
TRIM35-201ENST00000305364 STX5Q13190 355 aa13.34□□□□□ -0.27
TRIM35-201ENST00000305364 HNRNPDQ14103 355 aaKnown RBP13.34□□□□□ -0.27
TRIM35-201ENST00000305364 SNRNP48Q6IEG0 339 aaKnown RBP13.34□□□□□ -0.27
TRIM35-201ENST00000305364 C4orf22Q6V702 233 aa13.34□□□□□ -0.27
TRIM35-201ENST00000305364 SH3BP5LQ7L8J4 393 aa13.34□□□□□ -0.27
TRIM35-201ENST00000305364 MPP5Q8N3R9 675 aa13.34□□□□□ -0.27
TRIM35-201ENST00000305364 COLGALT1Q8NBJ5 622 aa13.34□□□□□ -0.27
TRIM35-201ENST00000305364 NPAS2Q99743 824 aa13.34□□□□□ -0.27
TRIM35-201ENST00000305364 PKD2L2Q9NZM6 624 aa13.34□□□□□ -0.27
TRIM35-201ENST00000305364 ESRRBO95718 433 aa13.34□□□□□ -0.27
TRIM35-201ENST00000305364 ASS1P00966 412 aaKnown RBP13.34□□□□□ -0.27
TRIM35-201ENST00000305364 SLC5A3P53794 718 aa13.34□□□□□ -0.27
TRIM35-201ENST00000305364 PPM1LQ5SGD2 360 aa13.34□□□□□ -0.27
TRIM35-201ENST00000305364 WDR49Q8IV35 697 aa13.34□□□□□ -0.27
TRIM35-201ENST00000305364 MARVELD2Q8N4S9 558 aa13.34□□□□□ -0.27
TRIM35-201ENST00000305364 ZBTB8BQ8NAP8 495 aaPredicted RBP13.34□□□□□ -0.27
TRIM35-201ENST00000305364 ACMSDQ8TDX5 336 aa13.34□□□□□ -0.27
TRIM35-201ENST00000305364 TFB1MQ8WVM0 346 aaKnown RBP13.34□□□□□ -0.27
TRIM35-201ENST00000305364 ABHD8Q96I13 439 aa13.34□□□□□ -0.27
TRIM35-201ENST00000305364 DHRS4Q9BTZ2 278 aa13.34□□□□□ -0.27
TRIM35-201ENST00000305364 ZDHHC7Q9NXF8 308 aa13.34□□□□□ -0.27
TRIM35-201ENST00000305364 NAV1Q8NEY1 1877 aa13.34□□□□□ -0.27
TRIM35-201ENST00000305364 AMHP03971 560 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms