RNA–Protein interactions for RNA: ENST00000302316.12

CCDC7-202, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-202ENST00000302316 SLC45A4Q5BKX6 768 aa13.4□□□□□ -0.26
CCDC7-202ENST00000302316 PIK3R6Q5UE93 754 aa13.4□□□□□ -0.26
CCDC7-202ENST00000302316 MANEALQ5VSG8 457 aa13.4□□□□□ -0.26
CCDC7-202ENST00000302316 IZUMO3Q5VZ72 239 aa13.4□□□□□ -0.26
CCDC7-202ENST00000302316 KLHDC10Q6PID8 442 aa13.4□□□□□ -0.26
CCDC7-202ENST00000302316 PDZD4Q76G19 769 aaPredicted RBP13.4□□□□□ -0.26
CCDC7-202ENST00000302316 NETO2Q8NC67 525 aa13.4□□□□□ -0.26
CCDC7-202ENST00000302316 LRRN4Q8WUT4 740 aa13.4□□□□□ -0.26
CCDC7-202ENST00000302316 ART4Q93070 314 aa13.4□□□□□ -0.26
CCDC7-202ENST00000302316 TBC1D31Q96DN5 1066 aa13.4□□□□□ -0.26
CCDC7-202ENST00000302316 MTRF1LQ9UGC7 380 aaKnown RBP13.4□□□□□ -0.26
CCDC7-202ENST00000302316 NEU3Q9UQ49 428 aa13.4□□□□□ -0.26
CCDC7-202ENST00000302316 PCDHA11Q9Y5I1 949 aa13.4□□□□□ -0.26
CCDC7-202ENST00000302316 E9PAM4 449 aa13.39□□□□□ -0.27
CCDC7-202ENST00000302316 ATP8B1O43520 1251 aa13.39□□□□□ -0.27
CCDC7-202ENST00000302316 SASH3O75995 380 aa13.39□□□□□ -0.27
CCDC7-202ENST00000302316 CLCN4P51793 760 aa13.39□□□□□ -0.27
CCDC7-202ENST00000302316 MS4A13Q5J8X5 152 aa13.39□□□□□ -0.27
CCDC7-202ENST00000302316 NUGGCQ68CJ6 796 aa13.39□□□□□ -0.27
CCDC7-202ENST00000302316 ELMOD1Q8N336 334 aa13.39□□□□□ -0.27
CCDC7-202ENST00000302316 BBOF1Q8ND07 529 aa13.39□□□□□ -0.27
CCDC7-202ENST00000302316 TFB1MQ8WVM0 346 aaKnown RBP13.39□□□□□ -0.27
CCDC7-202ENST00000302316 LRRC45Q96CN5 670 aa13.39□□□□□ -0.27
CCDC7-202ENST00000302316 YBX2Q9Y2T7 364 aaKnown RBP13.39□□□□□ -0.27
CCDC7-202ENST00000302316 C2orf78A6NCI8 922 aa13.39□□□□□ -0.27
CCDC7-202ENST00000302316 HACD1B0YJ81 288 aa13.39□□□□□ -0.27
CCDC7-202ENST00000302316 DNALI1O14645 258 aaPredicted RBP13.39□□□□□ -0.27
CCDC7-202ENST00000302316 PPP1R12AO14974 1030 aaPredicted RBP13.39□□□□□ -0.27
CCDC7-202ENST00000302316 FGF10O15520 208 aaPredicted RBP13.39□□□□□ -0.27
CCDC7-202ENST00000302316 HOXC13P31276 330 aa13.39□□□□□ -0.27
CCDC7-202ENST00000302316 ACTN2P35609 894 aa13.39□□□□□ -0.27
CCDC7-202ENST00000302316 NRLP54845 237 aa13.39□□□□□ -0.27
CCDC7-202ENST00000302316 MLLT6P55198 1093 aaPredicted RBP13.39□□□□□ -0.27
CCDC7-202ENST00000302316 NRG1Q02297 640 aaPredicted RBP13.39□□□□□ -0.27
CCDC7-202ENST00000302316 CAMK1Q14012 370 aa13.39□□□□□ -0.27
CCDC7-202ENST00000302316 PDK1Q15118 436 aa13.39□□□□□ -0.27
CCDC7-202ENST00000302316 HEATR6Q6AI08 1181 aaKnown RBP13.39□□□□□ -0.27
CCDC7-202ENST00000302316 MTERF4Q7Z6M4 381 aaKnown RBP13.39□□□□□ -0.27
CCDC7-202ENST00000302316 NPWQ8N729 165 aa13.39□□□□□ -0.27
CCDC7-202ENST00000302316 C1orf74Q96LT6 269 aa13.39□□□□□ -0.27
CCDC7-202ENST00000302316 CATSPERBQ9H7T0 1116 aa13.39□□□□□ -0.27
CCDC7-202ENST00000302316 USP29Q9HBJ7 922 aa13.39□□□□□ -0.27
CCDC7-202ENST00000302316 TRPC7Q9HCX4 862 aa13.39□□□□□ -0.27
CCDC7-202ENST00000302316 ANAPC5Q9UJX4 755 aa13.39□□□□□ -0.27
CCDC7-202ENST00000302316 VANGL2Q9ULK5 521 aa13.39□□□□□ -0.27
CCDC7-202ENST00000302316 RAD54BQ9Y620 910 aa13.39□□□□□ -0.27
CCDC7-202ENST00000302316 OAS1P00973 400 aaKnown RBP13.38□□□□□ -0.27
CCDC7-202ENST00000302316 F11P03951 625 aa13.38□□□□□ -0.27
CCDC7-202ENST00000302316 RPL22P35268 128 aaKnown RBP13.38□□□□□ -0.27
CCDC7-202ENST00000302316 PBX2P40425 430 aa13.38□□□□□ -0.27
CCDC7-202ENST00000302316 KCNQ1P51787 676 aa13.38□□□□□ -0.27
CCDC7-202ENST00000302316 ERVK-21P61565 698 aa13.38□□□□□ -0.27
CCDC7-202ENST00000302316 CAV1Q03135 178 aa13.38□□□□□ -0.27
CCDC7-202ENST00000302316 GPM6BQ13491 265 aa13.38□□□□□ -0.27
CCDC7-202ENST00000302316 PABPC1LQ4VXU2 614 aaKnown RBP13.38□□□□□ -0.27
CCDC7-202ENST00000302316 PPM1LQ5SGD2 360 aa13.38□□□□□ -0.27
CCDC7-202ENST00000302316 C14orf80Q86SX3 495 aa13.38□□□□□ -0.27
CCDC7-202ENST00000302316 TMEM150AQ86TG1 271 aa13.38□□□□□ -0.27
CCDC7-202ENST00000302316 RTP4Q96DX8 246 aa13.38□□□□□ -0.27
CCDC7-202ENST00000302316 LGMNQ99538 433 aa13.38□□□□□ -0.27
CCDC7-202ENST00000302316 IL21Q9HBE4 155 aa13.38□□□□□ -0.27
CCDC7-202ENST00000302316 CHD7Q9P2D1 2997 aa13.38□□□□□ -0.27
CCDC7-202ENST00000302316 MAP2K7O14733 419 aa13.37□□□□□ -0.27
CCDC7-202ENST00000302316 NDC80O14777 642 aa13.37□□□□□ -0.27
CCDC7-202ENST00000302316 TP73O15350 636 aa13.37□□□□□ -0.27
CCDC7-202ENST00000302316 CCL16O15467 120 aa13.37□□□□□ -0.27
CCDC7-202ENST00000302316 GABRR2P28476 465 aa13.37□□□□□ -0.27
CCDC7-202ENST00000302316 COG7P83436 770 aa13.37□□□□□ -0.27
CCDC7-202ENST00000302316 AP1B1Q10567 949 aa13.37□□□□□ -0.27
CCDC7-202ENST00000302316 MTA1Q13330 715 aa13.37□□□□□ -0.27
CCDC7-202ENST00000302316 AUHQ13825 339 aaKnown RBP13.37□□□□□ -0.27
CCDC7-202ENST00000302316 RAP1GAP2Q684P5 730 aa13.37□□□□□ -0.27
CCDC7-202ENST00000302316 LRRC31Q6UY01 552 aa13.37□□□□□ -0.27
CCDC7-202ENST00000302316 TMC3Q7Z5M5 1100 aa13.37□□□□□ -0.27
CCDC7-202ENST00000302316 CHSY1Q86X52 802 aa13.37□□□□□ -0.27
CCDC7-202ENST00000302316 TP53INP2Q8IXH6 220 aa13.37□□□□□ -0.27
CCDC7-202ENST00000302316 CCNYQ8ND76 341 aa13.37□□□□□ -0.27
CCDC7-202ENST00000302316 SLC22A17Q8WUG5 538 aa13.37□□□□□ -0.27
CCDC7-202ENST00000302316 PLD4Q96BZ4 506 aa13.37□□□□□ -0.27
CCDC7-202ENST00000302316 PRDM12Q9H4Q4 367 aa13.37□□□□□ -0.27
CCDC7-202ENST00000302316 CERS4Q9HA82 394 aa13.37□□□□□ -0.27
CCDC7-202ENST00000302316 MAN1C1Q9NR34 630 aa13.37□□□□□ -0.27
CCDC7-202ENST00000302316 TPX2Q9ULW0 747 aaKnown RBP13.37□□□□□ -0.27
CCDC7-202ENST00000302316 CHD9Q3L8U1 2897 aa13.37□□□□□ -0.27
CCDC7-202ENST00000302316 H3BNC9 293 aa13.37□□□□□ -0.27
CCDC7-202ENST00000302316 VAV1P15498 845 aa13.37□□□□□ -0.27
CCDC7-202ENST00000302316 MX2P20592 715 aa13.37□□□□□ -0.27
CCDC7-202ENST00000302316 HSPA9P38646 679 aaKnown RBP13.37□□□□□ -0.27
CCDC7-202ENST00000302316 HARS2P49590 506 aaKnown RBP13.37□□□□□ -0.27
CCDC7-202ENST00000302316 DHX9Q08211 1270 aaKnown RBP13.37□□□□□ -0.27
CCDC7-202ENST00000302316 PRKD1Q15139 912 aaPredicted RBP13.37□□□□□ -0.27
CCDC7-202ENST00000302316 ACBD5Q5T8D3 534 aaPredicted RBP13.37□□□□□ -0.27
CCDC7-202ENST00000302316 HIBCHQ6NVY1 386 aaPredicted RBP13.37□□□□□ -0.27
CCDC7-202ENST00000302316 RHBDF2Q6PJF5 856 aa13.37□□□□□ -0.27
CCDC7-202ENST00000302316 TMC8Q8IU68 726 aa13.37□□□□□ -0.27
CCDC7-202ENST00000302316 HS6ST3Q8IZP7 471 aa13.37□□□□□ -0.27
CCDC7-202ENST00000302316 MREGQ8N565 214 aa13.37□□□□□ -0.27
CCDC7-202ENST00000302316 TAB3Q8N5C8 712 aaPredicted RBP13.37□□□□□ -0.27
CCDC7-202ENST00000302316 TSEN2Q8NCE0 465 aaKnown RBP13.37□□□□□ -0.27
CCDC7-202ENST00000302316 HTR3CQ8WXA8 447 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms