RNA–Protein interactions for RNA: ENST00000302251.9

PDGFD-201, Transcript of platelet derived growth factor D, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDGFD, Length 4,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-201ENST00000302251 SNX31Q8N9S9 440 aa12.44□□□□□ -0.42
PDGFD-201ENST00000302251 C7orf43Q8WVR3 580 aa12.44□□□□□ -0.42
PDGFD-201ENST00000302251 NPAS2Q99743 824 aa12.44□□□□□ -0.42
PDGFD-201ENST00000302251 SLC4A5Q9BY07 1137 aa12.44□□□□□ -0.42
PDGFD-201ENST00000302251 UBE2OQ9C0C9 1292 aaKnown RBP12.44□□□□□ -0.42
PDGFD-201ENST00000302251 C2orf40Q9H1Z8 148 aa12.44□□□□□ -0.42
PDGFD-201ENST00000302251 COG4Q9H9E3 785 aa12.44□□□□□ -0.42
PDGFD-201ENST00000302251 NMRAL1Q9HBL8 299 aa12.44□□□□□ -0.42
PDGFD-201ENST00000302251 ZNF358Q9NW07 568 aa12.44□□□□□ -0.42
PDGFD-201ENST00000302251 TJP2Q9UDY2 1190 aa12.44□□□□□ -0.42
PDGFD-201ENST00000302251 POMPQ9Y244 141 aa12.44□□□□□ -0.42
PDGFD-201ENST00000302251 SIGLEC16A6NMB1 481 aa12.43□□□□□ -0.42
PDGFD-201ENST00000302251 ZNF839A8K0R7 811 aa12.43□□□□□ -0.42
PDGFD-201ENST00000302251 NR5A2O00482 541 aa12.43□□□□□ -0.42
PDGFD-201ENST00000302251 CHEK2O96017 543 aa12.43□□□□□ -0.42
PDGFD-201ENST00000302251 PAMP19021 973 aa12.43□□□□□ -0.42
PDGFD-201ENST00000302251 EIF4BP23588 611 aaKnown RBP12.43□□□□□ -0.42
PDGFD-201ENST00000302251 NAMPTP43490 491 aa12.43□□□□□ -0.42
PDGFD-201ENST00000302251 NDST1P52848 882 aa12.43□□□□□ -0.42
PDGFD-201ENST00000302251 POU6F1Q14863 301 aa12.43□□□□□ -0.42
PDGFD-201ENST00000302251 CDCA2Q69YH5 1023 aaPredicted RBP12.43□□□□□ -0.42
PDGFD-201ENST00000302251 KYAT3Q6YP21 454 aaKnown RBP12.43□□□□□ -0.42
PDGFD-201ENST00000302251 TMC7Q7Z402 723 aa12.43□□□□□ -0.42
PDGFD-201ENST00000302251 CIB1Q99828 191 aa12.43□□□□□ -0.42
PDGFD-201ENST00000302251 SNCAIPQ9Y6H5 919 aa12.43□□□□□ -0.42
PDGFD-201ENST00000302251 SNED1Q8TER0 1413 aa12.43□□□□□ -0.42
PDGFD-201ENST00000302251 ANKRD12Q6UB98 2062 aa12.43□□□□□ -0.42
PDGFD-201ENST00000302251 A6NHS1 94 aa12.43□□□□□ -0.42
PDGFD-201ENST00000302251 CXorf49A8MYA2 514 aaPredicted RBP12.43□□□□□ -0.42
PDGFD-201ENST00000302251 INPP4BO15327 924 aa12.43□□□□□ -0.42
PDGFD-201ENST00000302251 CLOCKO15516 846 aa12.43□□□□□ -0.42
PDGFD-201ENST00000302251 ALBP02768 609 aa12.43□□□□□ -0.42
PDGFD-201ENST00000302251 CHRM1P11229 460 aaPredicted RBP12.43□□□□□ -0.42
PDGFD-201ENST00000302251 TCF7P36402 384 aaPredicted RBP12.43□□□□□ -0.42
PDGFD-201ENST00000302251 C21orf59P57076 290 aa12.43□□□□□ -0.42
PDGFD-201ENST00000302251 TUBGCP3Q96CW5 907 aa12.43□□□□□ -0.42
PDGFD-201ENST00000302251 TEX13BQ9BXU2 312 aa12.43□□□□□ -0.42
PDGFD-201ENST00000302251 FZD1Q9UP38 647 aa12.43□□□□□ -0.42
PDGFD-201ENST00000302251 AP4S1Q9Y587 144 aa12.43□□□□□ -0.42
PDGFD-201ENST00000302251 ZNF536O15090 1300 aa12.43□□□□□ -0.42
PDGFD-201ENST00000302251 ADGRA2Q96PE1 1338 aa12.43□□□□□ -0.42
PDGFD-201ENST00000302251 NUP107P57740 925 aa12.43□□□□□ -0.42
PDGFD-201ENST00000302251 SFT2D3Q587I9 215 aa12.43□□□□□ -0.42
PDGFD-201ENST00000302251 C12orf29Q8N999 325 aa12.43□□□□□ -0.42
PDGFD-201ENST00000302251 FBXO27Q8NI29 283 aa12.43□□□□□ -0.42
PDGFD-201ENST00000302251 HTR3CQ8WXA8 447 aa12.43□□□□□ -0.42
PDGFD-201ENST00000302251 CPB2Q96IY4 423 aa12.43□□□□□ -0.42
PDGFD-201ENST00000302251 CPXM1Q96SM3 734 aa12.43□□□□□ -0.42
PDGFD-201ENST00000302251 APOBEC3GQ9HC16 384 aaKnown RBP12.43□□□□□ -0.42
PDGFD-201ENST00000302251 ARHGEF38Q9NXL2 777 aa12.43□□□□□ -0.42
PDGFD-201ENST00000302251 LNPEPQ9UIQ6 1025 aa12.43□□□□□ -0.42
PDGFD-201ENST00000302251 ACOT9Q9Y305 439 aa12.43□□□□□ -0.42
PDGFD-201ENST00000302251 MYPNQ86TC9 1320 aa12.43□□□□□ -0.42
PDGFD-201ENST00000302251 MGEA5O60502 916 aa12.42□□□□□ -0.42
PDGFD-201ENST00000302251 TCEA3O75764 348 aa12.42□□□□□ -0.42
PDGFD-201ENST00000302251 MTA2O94776 668 aa12.42□□□□□ -0.42
PDGFD-201ENST00000302251 GNAZP19086 355 aa12.42□□□□□ -0.42
PDGFD-201ENST00000302251 NR1H2P55055 460 aa12.42□□□□□ -0.42
PDGFD-201ENST00000302251 WASHC5Q12768 1159 aa12.42□□□□□ -0.42
PDGFD-201ENST00000302251 PDK2Q15119 407 aa12.42□□□□□ -0.42
PDGFD-201ENST00000302251 SH3PXD2AQ5TCZ1 1133 aa12.42□□□□□ -0.42
PDGFD-201ENST00000302251 LRRC38Q5VT99 294 aa12.42□□□□□ -0.42
PDGFD-201ENST00000302251 GPR107Q5VW38 600 aa12.42□□□□□ -0.42
PDGFD-201ENST00000302251 HEATR4Q86WZ0 1026 aa12.42□□□□□ -0.42
PDGFD-201ENST00000302251 TDRPQ86YL5 185 aa12.42□□□□□ -0.42
PDGFD-201ENST00000302251 OR52K1Q8NGK4 314 aa12.42□□□□□ -0.42
PDGFD-201ENST00000302251 NKD2Q969F2 451 aaPredicted RBP12.42□□□□□ -0.42
PDGFD-201ENST00000302251 RNF157Q96PX1 679 aa12.42□□□□□ -0.42
PDGFD-201ENST00000302251 EBNA1BP2Q99848 306 aaKnown RBP12.42□□□□□ -0.42
PDGFD-201ENST00000302251 FRMD8P1Q9BZ68 369 aaPredicted RBP12.42□□□□□ -0.42
PDGFD-201ENST00000302251 LRRC40Q9H9A6 602 aa12.42□□□□□ -0.42
PDGFD-201ENST00000302251 PALMDQ9NP74 551 aa12.42□□□□□ -0.42
PDGFD-201ENST00000302251 KLK14Q9P0G3 267 aa12.42□□□□□ -0.42
PDGFD-201ENST00000302251 ATP11BQ9Y2G3 1177 aa12.42□□□□□ -0.42
PDGFD-201ENST00000302251 PTGES3LE9PB15 166 aa12.42□□□□□ -0.42
PDGFD-201ENST00000302251 RNF103O00237 685 aa12.42□□□□□ -0.42
PDGFD-201ENST00000302251 TRDMT1O14717 391 aaKnown RBP12.42□□□□□ -0.42
PDGFD-201ENST00000302251 RNASEH1O60930 286 aaKnown RBP12.42□□□□□ -0.42
PDGFD-201ENST00000302251 TRMUO75648 421 aaKnown RBP12.42□□□□□ -0.42
PDGFD-201ENST00000302251 GRIA3P42263 894 aa12.42□□□□□ -0.42
PDGFD-201ENST00000302251 NAA20P61599 178 aa12.42□□□□□ -0.42
PDGFD-201ENST00000302251 KLF10Q13118 480 aa12.42□□□□□ -0.42
PDGFD-201ENST00000302251 ZIK1Q3SY52 487 aaPredicted RBP12.42□□□□□ -0.42
PDGFD-201ENST00000302251 PERM1Q5SV97 790 aa12.42□□□□□ -0.42
PDGFD-201ENST00000302251 ADCK1Q86TW2 530 aa12.42□□□□□ -0.42
PDGFD-201ENST00000302251 KBTBD2Q8IY47 623 aa12.42□□□□□ -0.42
PDGFD-201ENST00000302251 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.42□□□□□ -0.42
PDGFD-201ENST00000302251 CD101Q93033 1021 aa12.42□□□□□ -0.42
PDGFD-201ENST00000302251 CELF6Q96J87 481 aaKnown RBP12.42□□□□□ -0.42
PDGFD-201ENST00000302251 MFSD14AQ96MC6 490 aa12.42□□□□□ -0.42
PDGFD-201ENST00000302251 LY75O60449 1722 aa12.42□□□□□ -0.42
PDGFD-201ENST00000302251 LINC00854A0A1B0GVQ3 168 aa12.42□□□□□ -0.42
PDGFD-201ENST00000302251 AGRPO00253 132 aa12.42□□□□□ -0.42
PDGFD-201ENST00000302251 UBDO15205 165 aa12.42□□□□□ -0.42
PDGFD-201ENST00000302251 EDIL3O43854 480 aa12.42□□□□□ -0.42
PDGFD-201ENST00000302251 CCNE2O96020 404 aa12.42□□□□□ -0.42
PDGFD-201ENST00000302251 GJB1P08034 283 aa12.42□□□□□ -0.42
PDGFD-201ENST00000302251 ITGA2BP08514 1039 aa12.42□□□□□ -0.42
PDGFD-201ENST00000302251 PTPN7P35236 360 aa12.42□□□□□ -0.42
PDGFD-201ENST00000302251 TRPC1P48995 793 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms