RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 PQLC3Q8N755 202 aa11.17□□□□□ -0.62
ZNF558-201ENST00000301475 ADAM32Q8TC27 787 aa11.17□□□□□ -0.62
ZNF558-201ENST00000301475 BIRC8Q96P09 236 aa11.17□□□□□ -0.62
ZNF558-201ENST00000301475 FRMD8Q9BZ67 464 aaPredicted RBP11.17□□□□□ -0.62
ZNF558-201ENST00000301475 GLIS2Q9BZE0 524 aaPredicted RBP11.17□□□□□ -0.62
ZNF558-201ENST00000301475 KLC2Q9H0B6 622 aa11.17□□□□□ -0.62
ZNF558-201ENST00000301475 EPS15L1Q9UBC2 864 aa11.17□□□□□ -0.62
ZNF558-201ENST00000301475 GABBR1Q9UBS5 961 aa11.17□□□□□ -0.62
ZNF558-201ENST00000301475 BARX2Q9UMQ3 279 aaPredicted RBP11.17□□□□□ -0.62
ZNF558-201ENST00000301475 SYNPO2Q9UMS6 1093 aa11.17□□□□□ -0.62
ZNF558-201ENST00000301475 HEY1Q9Y5J3 304 aa11.17□□□□□ -0.62
ZNF558-201ENST00000301475 PSAT1Q9Y617 370 aa11.17□□□□□ -0.62
ZNF558-201ENST00000301475 GOLGA8QA0A0J9YX86 632 aa11.17□□□□□ -0.62
ZNF558-201ENST00000301475 GOLGA8OA6NCC3 632 aa11.17□□□□□ -0.62
ZNF558-201ENST00000301475 GOLGA8NF8WBI6 632 aa11.17□□□□□ -0.62
ZNF558-201ENST00000301475 ENTPD3O75355 529 aa11.17□□□□□ -0.62
ZNF558-201ENST00000301475 DGKIO75912 1065 aa11.17□□□□□ -0.62
ZNF558-201ENST00000301475 ENDOD1O94919 500 aa11.17□□□□□ -0.62
ZNF558-201ENST00000301475 METTL18O95568 372 aa11.17□□□□□ -0.62
ZNF558-201ENST00000301475 GRK2P25098 689 aa11.17□□□□□ -0.62
ZNF558-201ENST00000301475 HSPA13P48723 471 aa11.17□□□□□ -0.62
ZNF558-201ENST00000301475 NUMBP49757 651 aa11.17□□□□□ -0.62
ZNF558-201ENST00000301475 PSMD7P51665 324 aa11.17□□□□□ -0.62
ZNF558-201ENST00000301475 PRKG1Q13976 671 aa11.17□□□□□ -0.62
ZNF558-201ENST00000301475 FSCBQ5H9T9 825 aa11.17□□□□□ -0.62
ZNF558-201ENST00000301475 NAPRTQ6XQN6 538 aa11.17□□□□□ -0.62
ZNF558-201ENST00000301475 TRIML2Q8N7C3 387 aa11.17□□□□□ -0.62
ZNF558-201ENST00000301475 LRRC39Q96DD0 335 aa11.17□□□□□ -0.62
ZNF558-201ENST00000301475 TAAR1Q96RJ0 339 aa11.17□□□□□ -0.62
ZNF558-201ENST00000301475 MSTO1Q9BUK6 570 aa11.17□□□□□ -0.62
ZNF558-201ENST00000301475 TARS2Q9BW92 718 aaKnown RBP11.17□□□□□ -0.62
ZNF558-201ENST00000301475 MTMR12Q9C0I1 747 aa11.17□□□□□ -0.62
ZNF558-201ENST00000301475 FAM96AQ9H5X1 160 aa11.17□□□□□ -0.62
ZNF558-201ENST00000301475 XPNPEP3Q9NQH7 507 aa11.17□□□□□ -0.62
ZNF558-201ENST00000301475 MOCS1Q9NZB8 636 aa11.17□□□□□ -0.62
ZNF558-201ENST00000301475 PCDHA11Q9Y5I1 949 aa11.17□□□□□ -0.62
ZNF558-201ENST00000301475 PCNTO95613 3336 aa11.17□□□□□ -0.62
ZNF558-201ENST00000301475 FOXD2O60548 495 aaPredicted RBP11.17□□□□□ -0.62
ZNF558-201ENST00000301475 ZBTB7AO95365 584 aa11.17□□□□□ -0.62
ZNF558-201ENST00000301475 ZBED1O96006 694 aa11.17□□□□□ -0.62
ZNF558-201ENST00000301475 GLDCP23378 1020 aa11.17□□□□□ -0.62
ZNF558-201ENST00000301475 CRADDP78560 199 aa11.17□□□□□ -0.62
ZNF558-201ENST00000301475 ITPRIPL1Q6GPH6 555 aa11.17□□□□□ -0.62
ZNF558-201ENST00000301475 ANKRD23Q86SG2 305 aa11.17□□□□□ -0.62
ZNF558-201ENST00000301475 PLD5Q8N7P1 536 aa11.17□□□□□ -0.62
ZNF558-201ENST00000301475 SYTL5Q8TDW5 730 aaPredicted RBP11.17□□□□□ -0.62
ZNF558-201ENST00000301475 GIPC3Q8TF64 312 aa11.17□□□□□ -0.62
ZNF558-201ENST00000301475 RCN3Q96D15 328 aa11.17□□□□□ -0.62
ZNF558-201ENST00000301475 ACO2Q99798 780 aaKnown RBP11.17□□□□□ -0.62
ZNF558-201ENST00000301475 OSBPL6Q9BZF3 934 aa11.17□□□□□ -0.62
ZNF558-201ENST00000301475 CDH19Q9H159 772 aa11.17□□□□□ -0.62
ZNF558-201ENST00000301475 TUT1Q9H6E5 874 aaKnown RBP11.17□□□□□ -0.62
ZNF558-201ENST00000301475 PLGRKTQ9HBL7 147 aa11.17□□□□□ -0.62
ZNF558-201ENST00000301475 EBF1Q9UH73 591 aa11.17□□□□□ -0.62
ZNF558-201ENST00000301475 CFLARO15519 480 aa11.16□□□□□ -0.62
ZNF558-201ENST00000301475 RPL10P27635 214 aaKnown RBP11.16□□□□□ -0.62
ZNF558-201ENST00000301475 SFNP31947 248 aa11.16□□□□□ -0.62
ZNF558-201ENST00000301475 CDH15P55291 814 aa11.16□□□□□ -0.62
ZNF558-201ENST00000301475 KRT76Q01546 638 aa11.16□□□□□ -0.62
ZNF558-201ENST00000301475 ORC1Q13415 861 aa11.16□□□□□ -0.62
ZNF558-201ENST00000301475 PTAR1Q7Z6K3 402 aaPredicted RBP11.16□□□□□ -0.62
ZNF558-201ENST00000301475 CROCCP3Q8IVE0 287 aa11.16□□□□□ -0.62
ZNF558-201ENST00000301475 TNS4Q8IZW8 715 aa11.16□□□□□ -0.62
ZNF558-201ENST00000301475 KYQ8NBH2 561 aa11.16□□□□□ -0.62
ZNF558-201ENST00000301475 FAM156AQ8NDB6 213 aa11.16□□□□□ -0.62
ZNF558-201ENST00000301475 PPP1R36Q96LQ0 422 aa11.16□□□□□ -0.62
ZNF558-201ENST00000301475 SERPINI1Q99574 410 aa11.16□□□□□ -0.62
ZNF558-201ENST00000301475 HAUS8Q9BT25 410 aa11.16□□□□□ -0.62
ZNF558-201ENST00000301475 GCOM2Q9BZD3 368 aaPredicted RBP11.16□□□□□ -0.62
ZNF558-201ENST00000301475 NIF3L1Q9GZT8 377 aa11.16□□□□□ -0.62
ZNF558-201ENST00000301475 CYP26B1Q9NR63 512 aa11.16□□□□□ -0.62
ZNF558-201ENST00000301475 FBXO40Q9UH90 709 aa11.16□□□□□ -0.62
ZNF558-201ENST00000301475 SEPT9Q9UHD8 586 aaPredicted RBP11.16□□□□□ -0.62
ZNF558-201ENST00000301475 DOLKQ9UPQ8 538 aa11.16□□□□□ -0.62
ZNF558-201ENST00000301475 CLEC11AQ9Y240 323 aa11.16□□□□□ -0.62
ZNF558-201ENST00000301475 WDR37Q9Y2I8 494 aa11.16□□□□□ -0.62
ZNF558-201ENST00000301475 PCDHB12Q9Y5F1 795 aa11.16□□□□□ -0.62
ZNF558-201ENST00000301475 TESPA1A2RU30 521 aaPredicted RBP11.16□□□□□ -0.62
ZNF558-201ENST00000301475 GPR25O00155 361 aa11.16□□□□□ -0.62
ZNF558-201ENST00000301475 NOP56O00567 594 aaKnown RBP11.16□□□□□ -0.62
ZNF558-201ENST00000301475 DGAT1O75907 488 aa11.16□□□□□ -0.62
ZNF558-201ENST00000301475 HMGCRP04035 888 aa11.16□□□□□ -0.62
ZNF558-201ENST00000301475 ICAM1P05362 532 aa11.16□□□□□ -0.62
ZNF558-201ENST00000301475 TNFSF9P41273 254 aa11.16□□□□□ -0.62
ZNF558-201ENST00000301475 PHKA2P46019 1235 aa11.16□□□□□ -0.62
ZNF558-201ENST00000301475 TXNL4AP83876 142 aaKnown RBP11.16□□□□□ -0.62
ZNF558-201ENST00000301475 NIPAL4Q0D2K0 466 aa11.16□□□□□ -0.62
ZNF558-201ENST00000301475 PGM5Q15124 567 aa11.16□□□□□ -0.62
ZNF558-201ENST00000301475 MGAT5BQ3V5L5 792 aa11.16□□□□□ -0.62
ZNF558-201ENST00000301475 TRNP1Q6NT89 227 aa11.16□□□□□ -0.62
ZNF558-201ENST00000301475 CARM1Q86X55 608 aa11.16□□□□□ -0.62
ZNF558-201ENST00000301475 MCUQ8NE86 351 aa11.16□□□□□ -0.62
ZNF558-201ENST00000301475 MCPH1Q8NEM0 835 aa11.16□□□□□ -0.62
ZNF558-201ENST00000301475 ACMSDQ8TDX5 336 aa11.16□□□□□ -0.62
ZNF558-201ENST00000301475 PDCD6IPQ8WUM4 868 aaKnown RBP11.16□□□□□ -0.62
ZNF558-201ENST00000301475 RSPH1Q8WYR4 309 aa11.16□□□□□ -0.62
ZNF558-201ENST00000301475 MOCOSQ96EN8 888 aa11.16□□□□□ -0.62
ZNF558-201ENST00000301475 SLC4A5Q9BY07 1137 aa11.16□□□□□ -0.62
ZNF558-201ENST00000301475 SEMA6AQ9H2E6 1030 aa11.16□□□□□ -0.62
ZNF558-201ENST00000301475 WDR55Q9H6Y2 383 aaPredicted RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms