RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 TJP2Q9UDY2 1190 aa14.8□□□□□ -0.04
CDT1-201ENST00000301019 PCDHB4Q9Y5E5 795 aa14.8□□□□□ -0.04
CDT1-201ENST00000301019 H7C0C1 242 aa14.8□□□□□ -0.04
CDT1-201ENST00000301019 AKAP10O43572 662 aa14.8□□□□□ -0.04
CDT1-201ENST00000301019 MTA2O94776 668 aa14.8□□□□□ -0.04
CDT1-201ENST00000301019 P4HBP07237 508 aaKnown RBP14.8□□□□□ -0.04
CDT1-201ENST00000301019 IDO1P14902 403 aa14.8□□□□□ -0.04
CDT1-201ENST00000301019 BAG6P46379 1132 aa14.8□□□□□ -0.04
CDT1-201ENST00000301019 ATP5OP48047 213 aa14.8□□□□□ -0.04
CDT1-201ENST00000301019 GSSP48637 474 aa14.8□□□□□ -0.04
CDT1-201ENST00000301019 SCNN1DP51172 638 aa14.8□□□□□ -0.04
CDT1-201ENST00000301019 MLLT10P55197 1068 aa14.8□□□□□ -0.04
CDT1-201ENST00000301019 ARPC4P59998 168 aa14.8□□□□□ -0.04
CDT1-201ENST00000301019 SP4Q02446 784 aa14.8□□□□□ -0.04
CDT1-201ENST00000301019 TCP10Q12799 353 aa14.8□□□□□ -0.04
CDT1-201ENST00000301019 KLF10Q13118 480 aa14.8□□□□□ -0.04
CDT1-201ENST00000301019 TUBB3Q13509 450 aa14.8□□□□□ -0.04
CDT1-201ENST00000301019 CRY2Q49AN0 593 aa14.8□□□□□ -0.04
CDT1-201ENST00000301019 TTC39BQ5VTQ0 682 aaPredicted RBP14.8□□□□□ -0.04
CDT1-201ENST00000301019 PPP2R2DQ66LE6 453 aa14.8□□□□□ -0.04
CDT1-201ENST00000301019 SLC26A11Q86WA9 606 aa14.8□□□□□ -0.04
CDT1-201ENST00000301019 RELL1Q8IUW5 271 aa14.8□□□□□ -0.04
CDT1-201ENST00000301019 EXOC8Q8IYI6 725 aa14.8□□□□□ -0.04
CDT1-201ENST00000301019 FIBCD1Q8N539 461 aa14.8□□□□□ -0.04
CDT1-201ENST00000301019 FEM1CQ96JP0 617 aa14.8□□□□□ -0.04
CDT1-201ENST00000301019 TRIM8Q9BZR9 551 aa14.8□□□□□ -0.04
CDT1-201ENST00000301019 IL1RL2Q9HB29 575 aa14.8□□□□□ -0.04
CDT1-201ENST00000301019 GOLGA8TH3BQL2 631 aa14.79□□□□□ -0.04
CDT1-201ENST00000301019 RFPL1O75677 317 aa14.79□□□□□ -0.04
CDT1-201ENST00000301019 KLHL2O95198 593 aa14.79□□□□□ -0.04
CDT1-201ENST00000301019 KRT75O95678 551 aa14.79□□□□□ -0.04
CDT1-201ENST00000301019 TNNI1P19237 187 aa14.79□□□□□ -0.04
CDT1-201ENST00000301019 BMT2Q1RMZ1 405 aa14.79□□□□□ -0.04
CDT1-201ENST00000301019 SV2AQ7L0J3 742 aa14.79□□□□□ -0.04
CDT1-201ENST00000301019 FBXO33Q7Z6M2 555 aa14.79□□□□□ -0.04
CDT1-201ENST00000301019 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.79□□□□□ -0.041e-7■■■■■ 36.1
CDT1-201ENST00000301019 ELMO1Q92556 727 aa14.79□□□□□ -0.04
CDT1-201ENST00000301019 SLC39A3Q9BRY0 314 aa14.79□□□□□ -0.04
CDT1-201ENST00000301019 OSBPL11Q9BXB4 747 aa14.79□□□□□ -0.04
CDT1-201ENST00000301019 THAP1Q9NVV9 213 aa14.79□□□□□ -0.04
CDT1-201ENST00000301019 KLQ9UEF7 1012 aa14.79□□□□□ -0.04
CDT1-201ENST00000301019 WARS2Q9UGM6 360 aaKnown RBP14.79□□□□□ -0.04
CDT1-201ENST00000301019 MEIS2O14770 477 aa14.79□□□□□ -0.04
CDT1-201ENST00000301019 GAS7O60861 476 aa14.79□□□□□ -0.04
CDT1-201ENST00000301019 CHEK2O96017 543 aa14.79□□□□□ -0.04
CDT1-201ENST00000301019 MMP10P09238 476 aa14.79□□□□□ -0.04
CDT1-201ENST00000301019 JAK1P23458 1154 aa14.79□□□□□ -0.04
CDT1-201ENST00000301019 GRAPQ13588 217 aa14.79□□□□□ -0.04
CDT1-201ENST00000301019 ZNF829Q3KNS6 432 aaPredicted RBP14.79□□□□□ -0.04
CDT1-201ENST00000301019 TEDDM1Q5T9Z0 273 aa14.79□□□□□ -0.04
CDT1-201ENST00000301019 LIN9Q5TKA1 542 aa14.79□□□□□ -0.04
CDT1-201ENST00000301019 UBE2UQ5VVX9 321 aa14.79□□□□□ -0.04
CDT1-201ENST00000301019 BNC2Q6ZN30 1099 aaPredicted RBP14.79□□□□□ -0.04
CDT1-201ENST00000301019 REM2Q8IYK8 340 aaPredicted RBP14.79□□□□□ -0.04
CDT1-201ENST00000301019 NAT8LQ8N9F0 302 aa14.79□□□□□ -0.04
CDT1-201ENST00000301019 EXD1Q8NHP7 514 aa14.79□□□□□ -0.04
CDT1-201ENST00000301019 GRAPLQ8TC17 118 aaPredicted RBP14.79□□□□□ -0.04
CDT1-201ENST00000301019 DEPDC1BQ8WUY9 529 aa14.79□□□□□ -0.04
CDT1-201ENST00000301019 PLEKHA5Q9HAU0 1116 aa14.79□□□□□ -0.04
CDT1-201ENST00000301019 C6orf203Q9P0P8 240 aaPredicted RBP14.79□□□□□ -0.04
CDT1-201ENST00000301019 ATP11BQ9Y2G3 1177 aa14.79□□□□□ -0.04
CDT1-201ENST00000301019 SNCAIPQ9Y6H5 919 aa14.79□□□□□ -0.04
CDT1-201ENST00000301019 MAFGO15525 162 aa14.79□□□□□ -0.04
CDT1-201ENST00000301019 ENO2P09104 434 aaPredicted RBP14.79□□□□□ -0.04
CDT1-201ENST00000301019 TCF7P36402 384 aaPredicted RBP14.79□□□□□ -0.04
CDT1-201ENST00000301019 CLK2P49760 499 aaKnown RBP14.79□□□□□ -0.04
CDT1-201ENST00000301019 CAMK2BQ13554 666 aa14.79□□□□□ -0.04
CDT1-201ENST00000301019 LRP8Q14114 963 aa14.79□□□□□ -0.04
CDT1-201ENST00000301019 ZBTB49Q6ZSB9 765 aa14.79□□□□□ -0.04
CDT1-201ENST00000301019 CMC1Q7Z7K0 106 aa14.79□□□□□ -0.04
CDT1-201ENST00000301019 IGFN1Q86VF2 1251 aa14.79□□□□□ -0.04
CDT1-201ENST00000301019 KBTBD7Q8WVZ9 684 aa14.79□□□□□ -0.04
CDT1-201ENST00000301019 TANKQ92844 425 aa14.79□□□□□ -0.04
CDT1-201ENST00000301019 LENG9Q96B70 501 aa14.79□□□□□ -0.04
CDT1-201ENST00000301019 APBA2Q99767 749 aa14.79□□□□□ -0.04
CDT1-201ENST00000301019 FAM213AQ9BRX8 229 aa14.79□□□□□ -0.04
CDT1-201ENST00000301019 LXNQ9BS40 222 aa14.79□□□□□ -0.04
CDT1-201ENST00000301019 ZBED2Q9BTP6 218 aa14.79□□□□□ -0.04
CDT1-201ENST00000301019 C1orf21Q9H246 121 aa14.79□□□□□ -0.04
CDT1-201ENST00000301019 RPF2Q9H7B2 306 aaKnown RBP14.79□□□□□ -0.04
CDT1-201ENST00000301019 DMAC2Q9NW81 257 aa14.79□□□□□ -0.04
CDT1-201ENST00000301019 GIN1Q9NXP7 522 aa14.79□□□□□ -0.04
CDT1-201ENST00000301019 NUDT5Q9UKK9 219 aa14.79□□□□□ -0.04
CDT1-201ENST00000301019 ZNRF3Q9ULT6 936 aa14.79□□□□□ -0.04
CDT1-201ENST00000301019 SCAF8Q9UPN6 1271 aaKnown RBP14.79□□□□□ -0.04
CDT1-201ENST00000301019 PRELID1Q9Y255 219 aa14.79□□□□□ -0.04
CDT1-201ENST00000301019 ITM2BQ9Y287 266 aa14.79□□□□□ -0.04
CDT1-201ENST00000301019 HSPA4LO95757 839 aa14.78□□□□□ -0.04
CDT1-201ENST00000301019 TMEM191BP0C7N4 346 aa14.78□□□□□ -0.04
CDT1-201ENST00000301019 FAM209AQ5JX71 171 aa14.78□□□□□ -0.04
CDT1-201ENST00000301019 FAM102BQ5T8I3 360 aa14.78□□□□□ -0.04
CDT1-201ENST00000301019 PRR23CQ6ZRP0 262 aa14.78□□□□□ -0.04
CDT1-201ENST00000301019 DAW1Q8N136 415 aa14.78□□□□□ -0.04
CDT1-201ENST00000301019 SPATA18Q8TC71 538 aa14.78□□□□□ -0.04
CDT1-201ENST00000301019 MXRA8Q9BRK3 442 aa14.78□□□□□ -0.04
CDT1-201ENST00000301019 NRDE2Q9H7Z3 1164 aa14.78□□□□□ -0.04
CDT1-201ENST00000301019 PCDH9Q9HC56 1237 aa14.78□□□□□ -0.04
CDT1-201ENST00000301019 IGSF9Q9P2J2 1179 aa14.78□□□□□ -0.04
CDT1-201ENST00000301019 ZNF229Q9UJW7 825 aa14.78□□□□□ -0.04
CDT1-201ENST00000301019 PCDHGA8Q9Y5G5 932 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms