RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 SNRPFP62306 86 aaKnown RBP15.17■□□□□ 0.02
SCN3B-201ENST00000299333 PRKCEQ02156 737 aa15.17■□□□□ 0.02
SCN3B-201ENST00000299333 TRAP1Q12931 704 aaKnown RBP15.17■□□□□ 0.02
SCN3B-201ENST00000299333 SV2CQ496J9 727 aa15.17■□□□□ 0.02
SCN3B-201ENST00000299333 CDK20Q8IZL9 346 aa15.17■□□□□ 0.02
SCN3B-201ENST00000299333 MOSPD2Q8NHP6 518 aa15.17■□□□□ 0.02
SCN3B-201ENST00000299333 SLITRK2Q9H156 845 aa15.17■□□□□ 0.02
SCN3B-201ENST00000299333 TMEM138Q9NPI0 162 aa15.17■□□□□ 0.02
SCN3B-201ENST00000299333 COMMD9Q9P000 198 aa15.17■□□□□ 0.02
SCN3B-201ENST00000299333 GSTK1Q9Y2Q3 226 aa15.17■□□□□ 0.02
SCN3B-201ENST00000299333 CCNT2O60583 730 aaKnown RBP15.17■□□□□ 0.02
SCN3B-201ENST00000299333 ERCC2P18074 760 aa15.17■□□□□ 0.02
SCN3B-201ENST00000299333 PTSQ03393 145 aa15.17■□□□□ 0.02
SCN3B-201ENST00000299333 AMHR2Q16671 573 aa15.17■□□□□ 0.02
SCN3B-201ENST00000299333 PHKG1Q16816 387 aa15.17■□□□□ 0.02
SCN3B-201ENST00000299333 SEZ6Q53EL9 994 aa15.17■□□□□ 0.02
SCN3B-201ENST00000299333 C10orf120Q5SQS8 335 aa15.17■□□□□ 0.02
SCN3B-201ENST00000299333 DHDDSQ86SQ9 333 aa15.17■□□□□ 0.02
SCN3B-201ENST00000299333 KCTD4Q8WVF5 259 aa15.17■□□□□ 0.02
SCN3B-201ENST00000299333 TATDN2Q93075 761 aa15.17■□□□□ 0.02
SCN3B-201ENST00000299333 TRMT13Q9NUP7 481 aaKnown RBP15.17■□□□□ 0.02
SCN3B-201ENST00000299333 ZNF446Q9NWS9 450 aa15.17■□□□□ 0.02
SCN3B-201ENST00000299333 ANAPC2Q9UJX6 822 aa15.17■□□□□ 0.02
SCN3B-201ENST00000299333 CDH9Q9ULB4 789 aa15.17■□□□□ 0.02
SCN3B-201ENST00000299333 VANGL2Q9ULK5 521 aa15.17■□□□□ 0.02
SCN3B-201ENST00000299333 PROSCO94903 275 aa15.17■□□□□ 0.02
SCN3B-201ENST00000299333 NFICP08651 508 aa15.17■□□□□ 0.02
SCN3B-201ENST00000299333 NPY2RP49146 381 aa15.17■□□□□ 0.02
SCN3B-201ENST00000299333 CAMK2GQ13555 558 aaPredicted RBP15.17■□□□□ 0.02
SCN3B-201ENST00000299333 PMF1Q6P1K2 205 aa15.17■□□□□ 0.02
SCN3B-201ENST00000299333 COLGALT1Q8NBJ5 622 aa15.17■□□□□ 0.02
SCN3B-201ENST00000299333 PHACTR1Q9C0D0 580 aa15.17■□□□□ 0.02
SCN3B-201ENST00000299333 ADPRHL2Q9NX46 363 aa15.17■□□□□ 0.02
SCN3B-201ENST00000299333 GALNT8Q9NY28 637 aa15.17■□□□□ 0.02
SCN3B-201ENST00000299333 USP18Q9UMW8 372 aa15.17■□□□□ 0.02
SCN3B-201ENST00000299333 WDR27A2RRH5 827 aa15.16■□□□□ 0.02
SCN3B-201ENST00000299333 KBTBD13C9JR72 458 aa15.16■□□□□ 0.02
SCN3B-201ENST00000299333 SNX3O60493 162 aa15.16■□□□□ 0.02
SCN3B-201ENST00000299333 LGR5O75473 907 aa15.16■□□□□ 0.02
SCN3B-201ENST00000299333 ANXA6P08133 673 aa15.16■□□□□ 0.02
SCN3B-201ENST00000299333 FAM86B2P0C5J1 330 aa15.16■□□□□ 0.02
SCN3B-201ENST00000299333 PABPC1P11940 636 aaKnown RBP15.16■□□□□ 0.02
SCN3B-201ENST00000299333 GCLCP48506 637 aaPredicted RBP15.16■□□□□ 0.02
SCN3B-201ENST00000299333 FAAP100Q0VG06 881 aa15.16■□□□□ 0.02
SCN3B-201ENST00000299333 TOP3AQ13472 1001 aaPredicted RBP15.16■□□□□ 0.02
SCN3B-201ENST00000299333 CBWD2Q8IUF1 395 aa15.16■□□□□ 0.02
SCN3B-201ENST00000299333 PGM2Q96G03 612 aa15.16■□□□□ 0.02
SCN3B-201ENST00000299333 A1CFQ9NQ94 594 aaKnown RBP15.16■□□□□ 0.02
SCN3B-201ENST00000299333 MIEF1Q9NQG6 463 aa15.16■□□□□ 0.02
SCN3B-201ENST00000299333 PIH1D1Q9NWS0 290 aaKnown RBP15.16■□□□□ 0.02
SCN3B-201ENST00000299333 DRG1Q9Y295 367 aaKnown RBP15.16■□□□□ 0.02
SCN3B-201ENST00000299333 IGSF9BQ9UPX0 1349 aa15.16■□□□□ 0.02
SCN3B-201ENST00000299333 CYP7B1O75881 506 aa15.16■□□□□ 0.02
SCN3B-201ENST00000299333 FOSL1P15407 271 aa15.16■□□□□ 0.02
SCN3B-201ENST00000299333 ADSSP30520 456 aa15.16■□□□□ 0.02
SCN3B-201ENST00000299333 IDH2P48735 452 aaKnown RBP15.16■□□□□ 0.02
SCN3B-201ENST00000299333 EIF2B5Q13144 721 aaKnown RBP15.16■□□□□ 0.02
SCN3B-201ENST00000299333 MGAT5BQ3V5L5 792 aa15.16■□□□□ 0.02
SCN3B-201ENST00000299333 FIGNQ5HY92 759 aa15.16■□□□□ 0.02
SCN3B-201ENST00000299333 NEK5Q6P3R8 708 aa15.16■□□□□ 0.02
SCN3B-201ENST00000299333 ABRAXAS1Q6UWZ7 409 aa15.16■□□□□ 0.02
SCN3B-201ENST00000299333 FBXO30Q8TB52 745 aa15.16■□□□□ 0.02
SCN3B-201ENST00000299333 ZHX1-C8orf76Q96EF9 292 aa15.16■□□□□ 0.02
SCN3B-201ENST00000299333 ZNF285Q96NJ3 590 aa15.16■□□□□ 0.02
SCN3B-201ENST00000299333 TARS2Q9BW92 718 aaKnown RBP15.16■□□□□ 0.02
SCN3B-201ENST00000299333 PCDH9Q9HC56 1237 aa15.16■□□□□ 0.02
SCN3B-201ENST00000299333 VPS45Q9NRW7 570 aa15.16■□□□□ 0.02
SCN3B-201ENST00000299333 ENOPH1Q9UHY7 261 aa15.16■□□□□ 0.02
SCN3B-201ENST00000299333 PLCL2Q9UPR0 1127 aa15.16■□□□□ 0.02
SCN3B-201ENST00000299333 TAF6LQ9Y6J9 622 aa15.16■□□□□ 0.02
SCN3B-201ENST00000299333 TMEM114B3SHH9 223 aa15.16■□□□□ 0.02
SCN3B-201ENST00000299333 TMCC2O75069 709 aa15.16■□□□□ 0.02
SCN3B-201ENST00000299333 GLP2RO95838 553 aa15.16■□□□□ 0.02
SCN3B-201ENST00000299333 RHAGQ02094 409 aa15.16■□□□□ 0.02
SCN3B-201ENST00000299333 PRKCQQ04759 706 aa15.16■□□□□ 0.02
SCN3B-201ENST00000299333 ZNF846Q147U1 533 aa15.16■□□□□ 0.02
SCN3B-201ENST00000299333 OCLNQ16625 522 aa15.16■□□□□ 0.02
SCN3B-201ENST00000299333 SLC47A2Q86VL8 602 aa15.16■□□□□ 0.02
SCN3B-201ENST00000299333 CLEC10AQ8IUN9 316 aa15.16■□□□□ 0.02
SCN3B-201ENST00000299333 CAMKK1Q8N5S9 505 aa15.16■□□□□ 0.02
SCN3B-201ENST00000299333 TMC2Q8TDI7 906 aa15.16■□□□□ 0.02
SCN3B-201ENST00000299333 NUDT12Q9BQG2 462 aa15.16■□□□□ 0.02
SCN3B-201ENST00000299333 CLPBQ9H078 707 aa15.16■□□□□ 0.02
SCN3B-201ENST00000299333 TOR4AQ9NXH8 423 aa15.16■□□□□ 0.02
SCN3B-201ENST00000299333 MTMR4Q9NYA4 1195 aa15.16■□□□□ 0.02
SCN3B-201ENST00000299333 KCNK4Q9NYG8 393 aa15.16■□□□□ 0.02
SCN3B-201ENST00000299333 PLOD3O60568 738 aa15.16■□□□□ 0.02
SCN3B-201ENST00000299333 ALADP13716 330 aa15.16■□□□□ 0.02
SCN3B-201ENST00000299333 SLC26A3P40879 764 aa15.16■□□□□ 0.02
SCN3B-201ENST00000299333 HARS2P49590 506 aaKnown RBP15.16■□□□□ 0.02
SCN3B-201ENST00000299333 ACTRT2Q8TDY3 377 aa15.16■□□□□ 0.02
SCN3B-201ENST00000299333 BHMTQ93088 406 aa15.16■□□□□ 0.02
SCN3B-201ENST00000299333 EPB41L4BQ9H329 900 aa15.16■□□□□ 0.02
SCN3B-201ENST00000299333 NUDT5Q9UKK9 219 aa15.16■□□□□ 0.02
SCN3B-201ENST00000299333 CD3EAPO15446 510 aaKnown RBP15.15■□□□□ 0.02
SCN3B-201ENST00000299333 STX11O75558 287 aa15.15■□□□□ 0.02
SCN3B-201ENST00000299333 ZMPSTE24O75844 475 aa15.15■□□□□ 0.02
SCN3B-201ENST00000299333 CNPP09543 421 aaKnown RBP15.15■□□□□ 0.02
SCN3B-201ENST00000299333 MSH3P20585 1137 aa15.15■□□□□ 0.02
SCN3B-201ENST00000299333 GRIA3P42263 894 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms