RNA–Protein interactions for RNA: ENST00000299162.9

FOXN4-201, Transcript of forkhead box N4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN4, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-201ENST00000299162 AMHP03971 560 aa10.4□□□□□ -0.74
FOXN4-201ENST00000299162 TPBGLP0DKB5 382 aa10.4□□□□□ -0.74
FOXN4-201ENST00000299162 ALDH3A1P30838 453 aa10.4□□□□□ -0.74
FOXN4-201ENST00000299162 CPT1AP50416 773 aa10.4□□□□□ -0.74
FOXN4-201ENST00000299162 MRPS35P82673 323 aaKnown RBP10.4□□□□□ -0.74
FOXN4-201ENST00000299162 KYAT1Q16773 422 aa10.4□□□□□ -0.74
FOXN4-201ENST00000299162 KLHL38Q2WGJ6 581 aa10.4□□□□□ -0.74
FOXN4-201ENST00000299162 KHDC1Q4VXA5 237 aaKnown RBP10.4□□□□□ -0.74
FOXN4-201ENST00000299162 UBXN11Q5T124 520 aa10.4□□□□□ -0.74
FOXN4-201ENST00000299162 SDHAF4Q5VUM1 108 aa10.4□□□□□ -0.74
FOXN4-201ENST00000299162 C16orf46Q6P387 395 aa10.4□□□□□ -0.74
FOXN4-201ENST00000299162 CDHR3Q6ZTQ4 885 aa10.4□□□□□ -0.74
FOXN4-201ENST00000299162 CEP128Q6ZU80 1094 aa10.4□□□□□ -0.74
FOXN4-201ENST00000299162 SPNS2Q8IVW8 549 aa10.4□□□□□ -0.74
FOXN4-201ENST00000299162 KCNN1Q92952 543 aa10.4□□□□□ -0.74
FOXN4-201ENST00000299162 TNIP3Q96KP6 325 aa10.4□□□□□ -0.74
FOXN4-201ENST00000299162 TTC1Q99614 292 aa10.4□□□□□ -0.74
FOXN4-201ENST00000299162 TMEM30AQ9NV96 361 aa10.4□□□□□ -0.74
FOXN4-201ENST00000299162 NMRK1Q9NWW6 199 aa10.4□□□□□ -0.74
FOXN4-201ENST00000299162 KIAA1257Q9ULG3 409 aa10.4□□□□□ -0.74
FOXN4-201ENST00000299162 ZNF510Q9Y2H8 683 aa10.4□□□□□ -0.74
FOXN4-201ENST00000299162 SMIM35A0A1B0GVV1 85 aa10.4□□□□□ -0.75
FOXN4-201ENST00000299162 SLC15A5A6NIM6 579 aa10.4□□□□□ -0.75
FOXN4-201ENST00000299162 TXNDC9O14530 226 aa10.4□□□□□ -0.75
FOXN4-201ENST00000299162 ATP9BO43861 1147 aa10.4□□□□□ -0.75
FOXN4-201ENST00000299162 ABHD2P08910 425 aa10.4□□□□□ -0.75
FOXN4-201ENST00000299162 TPH1P17752 444 aa10.4□□□□□ -0.75
FOXN4-201ENST00000299162 BDNFP23560 247 aa10.4□□□□□ -0.75
FOXN4-201ENST00000299162 PSMB4P28070 264 aa10.4□□□□□ -0.75
FOXN4-201ENST00000299162 CD52P31358 61 aa10.4□□□□□ -0.75
FOXN4-201ENST00000299162 RASSF2P50749 326 aa10.4□□□□□ -0.75
FOXN4-201ENST00000299162 EFHC2Q5JST6 749 aa10.4□□□□□ -0.75
FOXN4-201ENST00000299162 SNX30Q5VWJ9 437 aa10.4□□□□□ -0.75
FOXN4-201ENST00000299162 OTOAQ7RTW8 1153 aa10.4□□□□□ -0.75
FOXN4-201ENST00000299162 MTDHQ86UE4 582 aaKnown RBP10.4□□□□□ -0.75
FOXN4-201ENST00000299162 RFWD2Q8NHY2 731 aa10.4□□□□□ -0.75
FOXN4-201ENST00000299162 AGR3Q8TD06 166 aa10.4□□□□□ -0.75
FOXN4-201ENST00000299162 DCAKDQ8WVC6 231 aa10.4□□□□□ -0.75
FOXN4-201ENST00000299162 ABTB1Q969K4 478 aaPredicted RBP10.4□□□□□ -0.75
FOXN4-201ENST00000299162 EMID1Q96A84 441 aaPredicted RBP10.4□□□□□ -0.75
FOXN4-201ENST00000299162 SMYD2Q9NRG4 433 aa10.4□□□□□ -0.75
FOXN4-201ENST00000299162 PIGVQ9NUD9 493 aa10.4□□□□□ -0.75
FOXN4-201ENST00000299162 PCDH10Q9P2E7 1040 aa10.4□□□□□ -0.75
FOXN4-201ENST00000299162 KLHL8Q9P2G9 620 aaPredicted RBP10.4□□□□□ -0.75
FOXN4-201ENST00000299162 ABT1Q9ULW3 272 aaKnown RBP10.4□□□□□ -0.75
FOXN4-201ENST00000299162 ANK1P16157 1881 aa10.39□□□□□ -0.75
FOXN4-201ENST00000299162 COPEO14579 308 aa10.39□□□□□ -0.75
FOXN4-201ENST00000299162 OPHN1O60890 802 aa10.39□□□□□ -0.75
FOXN4-201ENST00000299162 OR4Q2P0C623 313 aa10.39□□□□□ -0.75
FOXN4-201ENST00000299162 CSH1P0DML2 217 aa10.39□□□□□ -0.75
FOXN4-201ENST00000299162 CSH2P0DML3 217 aa10.39□□□□□ -0.75
FOXN4-201ENST00000299162 VAV1P15498 845 aa10.39□□□□□ -0.75
FOXN4-201ENST00000299162 ELNP15502 786 aa10.39□□□□□ -0.75
FOXN4-201ENST00000299162 CA8P35219 290 aa10.39□□□□□ -0.75
FOXN4-201ENST00000299162 PDK2Q15119 407 aa10.39□□□□□ -0.75
FOXN4-201ENST00000299162 MTFR1Q15390 333 aa10.39□□□□□ -0.75
FOXN4-201ENST00000299162 ZBTB6Q15916 424 aa10.39□□□□□ -0.75
FOXN4-201ENST00000299162 SV2CQ496J9 727 aa10.39□□□□□ -0.75
FOXN4-201ENST00000299162 PKDCCQ504Y2 493 aa10.39□□□□□ -0.75
FOXN4-201ENST00000299162 CAND1Q86VP6 1230 aaKnown RBP10.39□□□□□ -0.75
FOXN4-201ENST00000299162 LRRC52Q8N7C0 313 aa10.39□□□□□ -0.75
FOXN4-201ENST00000299162 DNAAF3Q8N9W5 541 aa10.39□□□□□ -0.75
FOXN4-201ENST00000299162 COLGALT1Q8NBJ5 622 aa10.39□□□□□ -0.75
FOXN4-201ENST00000299162 GTF3C2Q8WUA4 911 aaPredicted RBP10.39□□□□□ -0.75
FOXN4-201ENST00000299162 SCG3Q8WXD2 468 aaKnown RBP10.39□□□□□ -0.75
FOXN4-201ENST00000299162 UNKQ9C0B0 810 aaKnown RBP10.39□□□□□ -0.75
FOXN4-201ENST00000299162 PRDM12Q9H4Q4 367 aa10.39□□□□□ -0.75
FOXN4-201ENST00000299162 AGO3Q9H9G7 860 aaKnown RBP10.39□□□□□ -0.75
FOXN4-201ENST00000299162 PLEKHA5Q9HAU0 1116 aa10.39□□□□□ -0.75
FOXN4-201ENST00000299162 CNTN3Q9P232 1028 aa10.39□□□□□ -0.75
FOXN4-201ENST00000299162 RNF103O00237 685 aa10.39□□□□□ -0.75
FOXN4-201ENST00000299162 PIRO00625 290 aa10.39□□□□□ -0.75
FOXN4-201ENST00000299162 FAM200BP0CF97 657 aa10.39□□□□□ -0.75
FOXN4-201ENST00000299162 MGAT1P26572 445 aa10.39□□□□□ -0.75
FOXN4-201ENST00000299162 PTPN7P35236 360 aa10.39□□□□□ -0.75
FOXN4-201ENST00000299162 KCNJ11Q14654 390 aa10.39□□□□□ -0.75
FOXN4-201ENST00000299162 STILQ15468 1287 aa10.39□□□□□ -0.75
FOXN4-201ENST00000299162 EML3Q32P44 896 aa10.39□□□□□ -0.75
FOXN4-201ENST00000299162 GDF6Q6KF10 455 aaPredicted RBP10.39□□□□□ -0.75
FOXN4-201ENST00000299162 UNC5AQ6ZN44 842 aa10.39□□□□□ -0.75
FOXN4-201ENST00000299162 SLC25A41Q8N5S1 370 aa10.39□□□□□ -0.75
FOXN4-201ENST00000299162 PPFIBP2Q8ND30 876 aa10.39□□□□□ -0.75
FOXN4-201ENST00000299162 PPP1R14CQ8TAE6 165 aa10.39□□□□□ -0.75
FOXN4-201ENST00000299162 RNF139Q8WU17 664 aa10.39□□□□□ -0.75
FOXN4-201ENST00000299162 PCED1BQ96HM7 432 aa10.39□□□□□ -0.75
FOXN4-201ENST00000299162 TMEM209Q96SK2 561 aa10.39□□□□□ -0.75
FOXN4-201ENST00000299162 FOXP3Q9BZS1 431 aa10.39□□□□□ -0.75
FOXN4-201ENST00000299162 FBXO6Q9NRD1 293 aaPredicted RBP10.39□□□□□ -0.75
FOXN4-201ENST00000299162 EURLQ9NYK6 297 aa10.39□□□□□ -0.75
FOXN4-201ENST00000299162 ARMCX1Q9P291 453 aa10.39□□□□□ -0.75
FOXN4-201ENST00000299162 ZFP69BQ9UJL9 534 aa10.39□□□□□ -0.75
FOXN4-201ENST00000299162 IQANK1A0A1B0GTG1 560 aa10.39□□□□□ -0.75
FOXN4-201ENST00000299162 EEF2KO00418 725 aaKnown RBP10.39□□□□□ -0.75
FOXN4-201ENST00000299162 XPOTO43592 962 aaKnown RBP10.39□□□□□ -0.75
FOXN4-201ENST00000299162 NPR3P17342 541 aa10.39□□□□□ -0.75
FOXN4-201ENST00000299162 ATP6V1C1P21283 382 aa10.39□□□□□ -0.75
FOXN4-201ENST00000299162 ARPP19P56211 112 aa10.39□□□□□ -0.75
FOXN4-201ENST00000299162 KPNB1Q14974 876 aaKnown RBP10.39□□□□□ -0.75
FOXN4-201ENST00000299162 CLEC20AQ6ZU45 233 aa10.39□□□□□ -0.75
FOXN4-201ENST00000299162 NDUFAF2Q8N183 169 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms