RNA–Protein interactions for RNA: ENST00000294816.6

LMX1A-201, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-201ENST00000294816 ADCY4Q8NFM4 1077 aa10.54□□□□□ -0.72
LMX1A-201ENST00000294816 MAPK15Q8TD08 544 aa10.54□□□□□ -0.72
LMX1A-201ENST00000294816 ZNF668Q96K58 619 aaPredicted RBP10.54□□□□□ -0.72
LMX1A-201ENST00000294816 NLRP4Q96MN2 994 aa10.54□□□□□ -0.72
LMX1A-201ENST00000294816 DHX33Q9H6R0 707 aaKnown RBP10.54□□□□□ -0.72
LMX1A-201ENST00000294816 C20orf96Q9NUD7 363 aaPredicted RBP10.54□□□□□ -0.72
LMX1A-201ENST00000294816 PLK2Q9NYY3 685 aa10.54□□□□□ -0.72
LMX1A-201ENST00000294816 CLEC11AQ9Y240 323 aa10.54□□□□□ -0.72
LMX1A-201ENST00000294816 PSAT1Q9Y617 370 aa10.54□□□□□ -0.72
LMX1A-201ENST00000294816 GREB1LQ9C091 1923 aaPredicted RBP10.54□□□□□ -0.72
LMX1A-201ENST00000294816 H0YCG3 227 aa10.54□□□□□ -0.72
LMX1A-201ENST00000294816 ITGBL1O95965 494 aaPredicted RBP10.54□□□□□ -0.72
LMX1A-201ENST00000294816 LDHAP00338 332 aaKnown RBP10.54□□□□□ -0.72
LMX1A-201ENST00000294816 PTPN1P18031 435 aaKnown RBP10.54□□□□□ -0.72
LMX1A-201ENST00000294816 RPL10P27635 214 aaKnown RBP10.54□□□□□ -0.72
LMX1A-201ENST00000294816 HOXA10P31260 410 aaPredicted RBP10.54□□□□□ -0.72
LMX1A-201ENST00000294816 FAM47CQ5HY64 1035 aa10.54□□□□□ -0.72
LMX1A-201ENST00000294816 PACS1Q6VY07 963 aa10.54□□□□□ -0.72
LMX1A-201ENST00000294816 ANKRD23Q86SG2 305 aa10.54□□□□□ -0.72
LMX1A-201ENST00000294816 TMEM130Q8N3G9 435 aa10.54□□□□□ -0.72
LMX1A-201ENST00000294816 PLD5Q8N7P1 536 aa10.54□□□□□ -0.72
LMX1A-201ENST00000294816 PDCD6IPQ8WUM4 868 aaKnown RBP10.54□□□□□ -0.72
LMX1A-201ENST00000294816 APBB2Q92870 758 aa10.54□□□□□ -0.72
LMX1A-201ENST00000294816 GFM2Q969S9 779 aaKnown RBP10.54□□□□□ -0.72
LMX1A-201ENST00000294816 PPWD1Q96BP3 646 aaKnown RBP10.54□□□□□ -0.72
LMX1A-201ENST00000294816 SIGLEC10Q96LC7 697 aa10.54□□□□□ -0.72
LMX1A-201ENST00000294816 PAIP1Q9H074 479 aaKnown RBP10.54□□□□□ -0.72
LMX1A-201ENST00000294816 DHX35Q9H5Z1 703 aaKnown RBP10.54□□□□□ -0.72
LMX1A-201ENST00000294816 MKS1Q9NXB0 559 aa10.54□□□□□ -0.72
LMX1A-201ENST00000294816 EPS15L1Q9UBC2 864 aa10.54□□□□□ -0.72
LMX1A-201ENST00000294816 COPG2Q9UBF2 871 aa10.54□□□□□ -0.72
LMX1A-201ENST00000294816 RIMS3Q9UJD0 308 aa10.54□□□□□ -0.72
LMX1A-201ENST00000294816 CNTN6Q9UQ52 1028 aa10.54□□□□□ -0.72
LMX1A-201ENST00000294816 PCDHA11Q9Y5I1 949 aa10.54□□□□□ -0.72
LMX1A-201ENST00000294816 CDY2AQ9Y6F7 541 aa10.54□□□□□ -0.72
LMX1A-201ENST00000294816 CDY1Q9Y6F8 540 aa10.54□□□□□ -0.72
LMX1A-201ENST00000294816 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.53□□□□□ -0.72
LMX1A-201ENST00000294816 POLRMTO00411 1230 aaKnown RBP10.53□□□□□ -0.72
LMX1A-201ENST00000294816 SEC24DO94855 1032 aaPredicted RBP10.53□□□□□ -0.72
LMX1A-201ENST00000294816 GSRP00390 522 aa10.53□□□□□ -0.72
LMX1A-201ENST00000294816 MYL4P12829 197 aa10.53□□□□□ -0.72
LMX1A-201ENST00000294816 P4HA1P13674 534 aa10.53□□□□□ -0.72
LMX1A-201ENST00000294816 ANKDD1AQ495B1 522 aa10.53□□□□□ -0.72
LMX1A-201ENST00000294816 NIPA1Q7RTP0 329 aa10.53□□□□□ -0.72
LMX1A-201ENST00000294816 CDR2LQ86X02 465 aaPredicted RBP10.53□□□□□ -0.72
LMX1A-201ENST00000294816 XYLT1Q86Y38 959 aa10.53□□□□□ -0.72
LMX1A-201ENST00000294816 ERI1Q8IV48 349 aaKnown RBP10.53□□□□□ -0.72
LMX1A-201ENST00000294816 CCDC60Q8IWA6 550 aaPredicted RBP10.53□□□□□ -0.72
LMX1A-201ENST00000294816 HOMEZQ8IX15 550 aa10.53□□□□□ -0.72
LMX1A-201ENST00000294816 SMYD1Q8NB12 490 aa10.53□□□□□ -0.72
LMX1A-201ENST00000294816 RXFP2Q8WXD0 754 aa10.53□□□□□ -0.72
LMX1A-201ENST00000294816 CLEC4DQ8WXI8 215 aa10.53□□□□□ -0.72
LMX1A-201ENST00000294816 PGLYRP2Q96PD5 576 aa10.53□□□□□ -0.72
LMX1A-201ENST00000294816 RNF157Q96PX1 679 aa10.53□□□□□ -0.72
LMX1A-201ENST00000294816 CEP41Q9BYV8 373 aa10.53□□□□□ -0.72
LMX1A-201ENST00000294816 GCOM2Q9BZD3 368 aaPredicted RBP10.53□□□□□ -0.72
LMX1A-201ENST00000294816 DCDC2Q9UHG0 476 aa10.53□□□□□ -0.72
LMX1A-201ENST00000294816 SCAF8Q9UPN6 1271 aaKnown RBP10.53□□□□□ -0.72
LMX1A-201ENST00000294816 XPOTO43592 962 aaKnown RBP10.53□□□□□ -0.72
LMX1A-201ENST00000294816 ME2P23368 584 aa10.53□□□□□ -0.72
LMX1A-201ENST00000294816 ACAT1P24752 427 aaKnown RBP10.53□□□□□ -0.72
LMX1A-201ENST00000294816 TCF7P36402 384 aaPredicted RBP10.53□□□□□ -0.72
LMX1A-201ENST00000294816 CAP2P40123 477 aa10.53□□□□□ -0.72
LMX1A-201ENST00000294816 CLDN10P78369 228 aa10.53□□□□□ -0.72
LMX1A-201ENST00000294816 APOFQ13790 326 aa10.53□□□□□ -0.72
LMX1A-201ENST00000294816 CEACAM7Q14002 265 aa10.53□□□□□ -0.72
LMX1A-201ENST00000294816 TMEM198Q66K66 360 aa10.53□□□□□ -0.72
LMX1A-201ENST00000294816 ATP6V1E2Q96A05 226 aa10.53□□□□□ -0.72
LMX1A-201ENST00000294816 ZNF341Q9BYN7 854 aa10.53□□□□□ -0.72
LMX1A-201ENST00000294816 FRMD8Q9BZ67 464 aaPredicted RBP10.53□□□□□ -0.72
LMX1A-201ENST00000294816 CDH19Q9H159 772 aa10.53□□□□□ -0.72
LMX1A-201ENST00000294816 WDR41Q9HAD4 459 aa10.53□□□□□ -0.72
LMX1A-201ENST00000294816 FIS1Q9Y3D6 152 aa10.53□□□□□ -0.72
LMX1A-201ENST00000294816 SNX13Q9Y5W8 968 aa10.53□□□□□ -0.72
LMX1A-201ENST00000294816 RBBP6Q7Z6E9 1792 aaKnown RBP10.53□□□□□ -0.72
LMX1A-201ENST00000294816 RNASEH2AO75792 299 aaKnown RBP10.52□□□□□ -0.72
LMX1A-201ENST00000294816 PSAPP07602 524 aa10.52□□□□□ -0.72
LMX1A-201ENST00000294816 ERVK-10P10266 1014 aa10.52□□□□□ -0.72
LMX1A-201ENST00000294816 MPSTP25325 297 aa10.52□□□□□ -0.72
LMX1A-201ENST00000294816 MLH1P40692 756 aa10.52□□□□□ -0.72
LMX1A-201ENST00000294816 HSPA13P48723 471 aa10.52□□□□□ -0.72
LMX1A-201ENST00000294816 RGS7P49802 495 aa10.52□□□□□ -0.72
LMX1A-201ENST00000294816 GTF2A2P52657 109 aa10.52□□□□□ -0.72
LMX1A-201ENST00000294816 ZFP1Q6P2D0 407 aa10.52□□□□□ -0.72
LMX1A-201ENST00000294816 CDAN1Q8IWY9 1227 aa10.52□□□□□ -0.72
LMX1A-201ENST00000294816 ERLEC1Q96DZ1 483 aa10.52□□□□□ -0.72
LMX1A-201ENST00000294816 NPAS2Q99743 824 aa10.52□□□□□ -0.72
LMX1A-201ENST00000294816 FERMT1Q9BQL6 677 aa10.52□□□□□ -0.72
LMX1A-201ENST00000294816 PDCD2LQ9BRP1 358 aa10.52□□□□□ -0.72
LMX1A-201ENST00000294816 COQ10BQ9H8M1 238 aa10.52□□□□□ -0.72
LMX1A-201ENST00000294816 PLGRKTQ9HBL7 147 aa10.52□□□□□ -0.72
LMX1A-201ENST00000294816 SEPT10Q9P0V9 454 aa10.52□□□□□ -0.72
LMX1A-201ENST00000294816 MED7O43513 233 aa10.52□□□□□ -0.73
LMX1A-201ENST00000294816 GPD1P21695 349 aa10.52□□□□□ -0.73
LMX1A-201ENST00000294816 MGAT1P26572 445 aa10.52□□□□□ -0.73
LMX1A-201ENST00000294816 VARSP26640 1264 aaKnown RBP10.52□□□□□ -0.73
LMX1A-201ENST00000294816 CCR10P46092 362 aa10.52□□□□□ -0.73
LMX1A-201ENST00000294816 TGFB2P61812 414 aa10.52□□□□□ -0.73
LMX1A-201ENST00000294816 ESRRGP62508 458 aa10.52□□□□□ -0.73
LMX1A-201ENST00000294816 SLC10A2Q12908 348 aaPredicted RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms