RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 IMPAD1Q9NX62 359 aa12.14□□□□□ -0.47
SYNGAP1-201ENST00000293748 NAALADL1Q9UQQ1 740 aa12.14□□□□□ -0.47
SYNGAP1-201ENST00000293748 PLXNA1Q9UIW2 1896 aa12.14□□□□□ -0.47
SYNGAP1-201ENST00000293748 A0A087WZ62 844 aa12.14□□□□□ -0.47
SYNGAP1-201ENST00000293748 TNFAIP8O95379 198 aa12.14□□□□□ -0.47
SYNGAP1-201ENST00000293748 FAM200BP0CF97 657 aa12.14□□□□□ -0.47
SYNGAP1-201ENST00000293748 GTF2H1P32780 548 aa12.14□□□□□ -0.47
SYNGAP1-201ENST00000293748 NNMTP40261 264 aa12.14□□□□□ -0.47
SYNGAP1-201ENST00000293748 TFDP3Q5H9I0 405 aa12.14□□□□□ -0.47
SYNGAP1-201ENST00000293748 THEMIS2Q5TEJ8 643 aa12.14□□□□□ -0.47
SYNGAP1-201ENST00000293748 AGAP9Q5VTM2 703 aa12.14□□□□□ -0.47
SYNGAP1-201ENST00000293748 LPCAT2Q7L5N7 544 aa12.14□□□□□ -0.47
SYNGAP1-201ENST00000293748 FDXACB1Q9BRP7 624 aaPredicted RBP12.14□□□□□ -0.47
SYNGAP1-201ENST00000293748 MMADHCQ9H3L0 296 aaPredicted RBP12.14□□□□□ -0.47
SYNGAP1-201ENST00000293748 SLC28A3Q9HAS3 691 aa12.14□□□□□ -0.47
SYNGAP1-201ENST00000293748 TUBGCP4Q9UGJ1 667 aa12.14□□□□□ -0.47
SYNGAP1-201ENST00000293748 DNAJC16Q9Y2G8 782 aa12.14□□□□□ -0.47
SYNGAP1-201ENST00000293748 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.14□□□□□ -0.47
SYNGAP1-201ENST00000293748 SLC30A1Q9Y6M5 507 aa12.14□□□□□ -0.47
SYNGAP1-201ENST00000293748 ADAMTS3O15072 1205 aa12.14□□□□□ -0.47
SYNGAP1-201ENST00000293748 RIPK2O43353 540 aa12.14□□□□□ -0.47
SYNGAP1-201ENST00000293748 ZNF862O60290 1169 aa12.14□□□□□ -0.47
SYNGAP1-201ENST00000293748 ZC3H11AO75152 810 aaKnown RBP eCLIP12.14□□□□□ -0.47
SYNGAP1-201ENST00000293748 PPIDQ08752 370 aaKnown RBP12.14□□□□□ -0.47
SYNGAP1-201ENST00000293748 SMTNL2Q2TAL5 461 aa12.14□□□□□ -0.47
SYNGAP1-201ENST00000293748 FAM117BQ6P1L5 589 aa12.14□□□□□ -0.47
SYNGAP1-201ENST00000293748 TJP2Q9UDY2 1190 aa12.14□□□□□ -0.47
SYNGAP1-201ENST00000293748 SHOC2Q9UQ13 582 aa12.14□□□□□ -0.47
SYNGAP1-201ENST00000293748 RBBP6Q7Z6E9 1792 aaKnown RBP12.14□□□□□ -0.47
SYNGAP1-201ENST00000293748 SUPT3HB4E1H0 165 aa12.13□□□□□ -0.47
SYNGAP1-201ENST00000293748 CD4P01730 458 aa12.13□□□□□ -0.47
SYNGAP1-201ENST00000293748 RALBP11234 206 aa12.13□□□□□ -0.47
SYNGAP1-201ENST00000293748 GRB10Q13322 594 aa12.13□□□□□ -0.47
SYNGAP1-201ENST00000293748 TMEM132DQ14C87 1099 aa12.13□□□□□ -0.47
SYNGAP1-201ENST00000293748 CEP78Q5JTW2 689 aa12.13□□□□□ -0.47
SYNGAP1-201ENST00000293748 RPS6KL1Q9Y6S9 549 aa12.13□□□□□ -0.47
SYNGAP1-201ENST00000293748 MBLAC1A4D2B0 266 aaPredicted RBP12.13□□□□□ -0.47
SYNGAP1-201ENST00000293748 WBP4O75554 376 aaKnown RBP12.13□□□□□ -0.47
SYNGAP1-201ENST00000293748 SKAP2O75563 359 aaPredicted RBP12.13□□□□□ -0.47
SYNGAP1-201ENST00000293748 MLH1P40692 756 aa12.13□□□□□ -0.47
SYNGAP1-201ENST00000293748 BLVRAP53004 296 aa12.13□□□□□ -0.47
SYNGAP1-201ENST00000293748 LRRC74BQ6ZQY2 392 aa12.13□□□□□ -0.47
SYNGAP1-201ENST00000293748 ZNF668Q96K58 619 aaPredicted RBP12.13□□□□□ -0.47
SYNGAP1-201ENST00000293748 MRPL9Q9BYD2 267 aaKnown RBP12.13□□□□□ -0.47
SYNGAP1-201ENST00000293748 COPG2Q9UBF2 871 aa12.13□□□□□ -0.47
SYNGAP1-201ENST00000293748 RWDD3Q9Y3V2 267 aa12.13□□□□□ -0.47
SYNGAP1-201ENST00000293748 TLL1O43897 1013 aa12.13□□□□□ -0.47
SYNGAP1-201ENST00000293748 TFE3P19532 575 aaPredicted RBP12.13□□□□□ -0.47
SYNGAP1-201ENST00000293748 C4BPBP20851 252 aa12.13□□□□□ -0.47
SYNGAP1-201ENST00000293748 SOX6P35712 828 aa12.13□□□□□ -0.47
SYNGAP1-201ENST00000293748 OTUD4Q01804 1114 aaKnown RBP12.13□□□□□ -0.47
SYNGAP1-201ENST00000293748 TP53BP2Q13625 1128 aa12.13□□□□□ -0.47
SYNGAP1-201ENST00000293748 TDHQ8IZJ6 230 aa12.13□□□□□ -0.47
SYNGAP1-201ENST00000293748 DBF4BQ8NFT6 615 aa12.13□□□□□ -0.47
SYNGAP1-201ENST00000293748 TLR10Q9BXR5 811 aa12.13□□□□□ -0.47
SYNGAP1-201ENST00000293748 LATS2Q9NRM7 1088 aa12.13□□□□□ -0.47
SYNGAP1-201ENST00000293748 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.13□□□□□ -0.47
SYNGAP1-201ENST00000293748 ZSWIM8A7E2V4 1837 aa12.13□□□□□ -0.47
SYNGAP1-201ENST00000293748 PARP14Q460N5 1801 aa12.13□□□□□ -0.47
SYNGAP1-201ENST00000293748 SDR42E2A6NKP2 422 aa12.13□□□□□ -0.47
SYNGAP1-201ENST00000293748 SOAT2O75908 522 aa12.13□□□□□ -0.47
SYNGAP1-201ENST00000293748 PROSCO94903 275 aa12.13□□□□□ -0.47
SYNGAP1-201ENST00000293748 TGM2P21980 687 aa12.13□□□□□ -0.47
SYNGAP1-201ENST00000293748 CD52P31358 61 aa12.13□□□□□ -0.47
SYNGAP1-201ENST00000293748 SERPINB5P36952 375 aa12.13□□□□□ -0.47
SYNGAP1-201ENST00000293748 RAD23AP54725 363 aa12.13□□□□□ -0.47
SYNGAP1-201ENST00000293748 ZNF571Q7Z3V5 609 aaPredicted RBP12.13□□□□□ -0.47
SYNGAP1-201ENST00000293748 KIAA0319LQ8IZA0 1049 aa12.13□□□□□ -0.47
SYNGAP1-201ENST00000293748 LRRN4CLQ8ND94 238 aa12.13□□□□□ -0.47
SYNGAP1-201ENST00000293748 ZNF483Q8TF39 744 aaPredicted RBP12.13□□□□□ -0.47
SYNGAP1-201ENST00000293748 CENPTQ96BT3 561 aa12.13□□□□□ -0.47
SYNGAP1-201ENST00000293748 CD274Q9NZQ7 290 aa12.13□□□□□ -0.47
SYNGAP1-201ENST00000293748 SFMBT1Q9UHJ3 866 aa12.13□□□□□ -0.47
SYNGAP1-201ENST00000293748 VPS9D1Q9Y2B5 631 aa12.13□□□□□ -0.47
SYNGAP1-201ENST00000293748 A0A1W2PPC1 479 aa12.12□□□□□ -0.47
SYNGAP1-201ENST00000293748 ANXA9O76027 345 aa12.12□□□□□ -0.47
SYNGAP1-201ENST00000293748 CCDC142Q17RM4 750 aa12.12□□□□□ -0.47
SYNGAP1-201ENST00000293748 ZFP1Q6P2D0 407 aa12.12□□□□□ -0.47
SYNGAP1-201ENST00000293748 TFB1MQ8WVM0 346 aaKnown RBP12.12□□□□□ -0.47
SYNGAP1-201ENST00000293748 DCUN1D1Q96GG9 259 aa12.12□□□□□ -0.47
SYNGAP1-201ENST00000293748 MAGED4Q96JG8 741 aa12.12□□□□□ -0.47
SYNGAP1-201ENST00000293748 DHX33Q9H6R0 707 aaKnown RBP12.12□□□□□ -0.47
SYNGAP1-201ENST00000293748 GDF3Q9NR23 364 aa12.12□□□□□ -0.47
SYNGAP1-201ENST00000293748 PKP3Q9Y446 797 aa12.12□□□□□ -0.47
SYNGAP1-201ENST00000293748 SYNDIG1LA6NDD5 238 aa12.12□□□□□ -0.47
SYNGAP1-201ENST00000293748 KPNA4O00629 521 aaPredicted RBP12.12□□□□□ -0.47
SYNGAP1-201ENST00000293748 FCHO1O14526 889 aa12.12□□□□□ -0.47
SYNGAP1-201ENST00000293748 DARSP14868 501 aaKnown RBP12.12□□□□□ -0.47
SYNGAP1-201ENST00000293748 ELF3P78545 371 aaPredicted RBP12.12□□□□□ -0.47
SYNGAP1-201ENST00000293748 LRRC74AQ0VAA2 488 aa12.12□□□□□ -0.47
SYNGAP1-201ENST00000293748 DCAF4L1Q3SXM0 396 aa12.12□□□□□ -0.47
SYNGAP1-201ENST00000293748 EPC2Q52LR7 807 aa12.12□□□□□ -0.47
SYNGAP1-201ENST00000293748 ELMSAN1Q6PJG2 1045 aa12.12□□□□□ -0.47
SYNGAP1-201ENST00000293748 KDELC2Q7Z4H8 507 aa12.12□□□□□ -0.47
SYNGAP1-201ENST00000293748 KYQ8NBH2 561 aa12.12□□□□□ -0.47
SYNGAP1-201ENST00000293748 APPL2Q8NEU8 664 aa12.12□□□□□ -0.47
SYNGAP1-201ENST00000293748 USP33Q8TEY7 942 aa12.12□□□□□ -0.47
SYNGAP1-201ENST00000293748 SH3KBP1Q96B97 665 aa12.12□□□□□ -0.47
SYNGAP1-201ENST00000293748 OTULINQ96BN8 352 aa12.12□□□□□ -0.47
SYNGAP1-201ENST00000293748 ZNF184Q99676 751 aaPredicted RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms