RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.34■□□□□ 0.37
CPSF4-201ENST00000292476 PEBP4Q96S96 227 aa17.34■□□□□ 0.37
CPSF4-201ENST00000292476 ZNF670Q9BS34 389 aa17.34■□□□□ 0.37
CPSF4-201ENST00000292476 ABCC13Q9NSE7 274 aa17.34■□□□□ 0.37
CPSF4-201ENST00000292476 TMEM30AQ9NV96 361 aa17.34■□□□□ 0.37
CPSF4-201ENST00000292476 RCOR3Q9P2K3 495 aaPredicted RBP17.34■□□□□ 0.37
CPSF4-201ENST00000292476 PSMC3IPQ9P2W1 217 aaPredicted RBP17.34■□□□□ 0.37
CPSF4-201ENST00000292476 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.33■□□□□ 0.37
CPSF4-201ENST00000292476 E7ESA3 106 aa17.33■□□□□ 0.37
CPSF4-201ENST00000292476 APOC4-APOC2K7ER74 178 aa17.33■□□□□ 0.37
CPSF4-201ENST00000292476 M0QYT0 321 aa17.33■□□□□ 0.37
CPSF4-201ENST00000292476 MGRN1O60291 552 aa17.33■□□□□ 0.37
CPSF4-201ENST00000292476 RTN3O95197 1032 aaPredicted RBP17.33■□□□□ 0.37
CPSF4-201ENST00000292476 GJB5O95377 273 aa17.33■□□□□ 0.37
CPSF4-201ENST00000292476 EFEMP2O95967 443 aa17.33■□□□□ 0.37
CPSF4-201ENST00000292476 APOC2P02655 101 aa17.33■□□□□ 0.37
CPSF4-201ENST00000292476 OR4Q2P0C623 313 aa17.33■□□□□ 0.37
CPSF4-201ENST00000292476 ZSCAN5DPP0CG00 497 aa17.33■□□□□ 0.37
CPSF4-201ENST00000292476 MNAT1P51948 309 aa17.33■□□□□ 0.37
CPSF4-201ENST00000292476 SLC5A3P53794 718 aa17.33■□□□□ 0.37
CPSF4-201ENST00000292476 RPL10AP62906 217 aaKnown RBP17.33■□□□□ 0.37
CPSF4-201ENST00000292476 OTUD4Q01804 1114 aaKnown RBP17.33■□□□□ 0.37
CPSF4-201ENST00000292476 DPYSL2Q16555 572 aa17.33■□□□□ 0.37
CPSF4-201ENST00000292476 ARL13BQ3SXY8 428 aa17.33■□□□□ 0.37
CPSF4-201ENST00000292476 GPRIN1Q7Z2K8 1008 aa17.33■□□□□ 0.37
CPSF4-201ENST00000292476 BNIPLQ7Z465 357 aa17.33■□□□□ 0.37
CPSF4-201ENST00000292476 RFX6Q8HWS3 928 aa17.33■□□□□ 0.37
CPSF4-201ENST00000292476 ATP11CQ8NB49 1132 aa17.33■□□□□ 0.37
CPSF4-201ENST00000292476 ACTL9Q8TC94 416 aa17.33■□□□□ 0.37
CPSF4-201ENST00000292476 DENND1AQ8TEH3 1009 aa17.33■□□□□ 0.37
CPSF4-201ENST00000292476 YME1L1Q96TA2 773 aa17.33■□□□□ 0.37
CPSF4-201ENST00000292476 SNRNP25Q9BV90 132 aaKnown RBP17.33■□□□□ 0.37
CPSF4-201ENST00000292476 RHOBTB2Q9BYZ6 727 aa17.33■□□□□ 0.37
CPSF4-201ENST00000292476 ZNF576Q9H609 170 aa17.33■□□□□ 0.37
CPSF4-201ENST00000292476 SLC28A3Q9HAS3 691 aa17.33■□□□□ 0.37
CPSF4-201ENST00000292476 RC3H2Q9HBD1 1191 aaKnown RBP17.33■□□□□ 0.37
CPSF4-201ENST00000292476 SPG21Q9NZD8 308 aa17.33■□□□□ 0.37
CPSF4-201ENST00000292476 MTRRQ9UBK8 725 aa17.33■□□□□ 0.37
CPSF4-201ENST00000292476 LCHNA4D1U4 455 aa17.32■□□□□ 0.36
CPSF4-201ENST00000292476 TNFRSF10BO14763 440 aa17.32■□□□□ 0.36
CPSF4-201ENST00000292476 CST8O60676 142 aa17.32■□□□□ 0.36
CPSF4-201ENST00000292476 ASMTLO95671 621 aa17.32■□□□□ 0.36
CPSF4-201ENST00000292476 SOD2P04179 222 aa17.32■□□□□ 0.36
CPSF4-201ENST00000292476 TAC1P20366 129 aa17.32■□□□□ 0.36
CPSF4-201ENST00000292476 SKIV2L2P42285 1042 aaKnown RBP17.32■□□□□ 0.36
CPSF4-201ENST00000292476 ZNF135P52742 658 aaPredicted RBP17.32■□□□□ 0.36
CPSF4-201ENST00000292476 RIPK1Q13546 671 aa17.32■□□□□ 0.36
CPSF4-201ENST00000292476 SPARCL1Q14515 664 aa17.32■□□□□ 0.36
CPSF4-201ENST00000292476 KLHL38Q2WGJ6 581 aa17.32■□□□□ 0.36
CPSF4-201ENST00000292476 RTP2Q5QGT7 225 aa17.32■□□□□ 0.36
CPSF4-201ENST00000292476 BSPRYQ5W0U4 402 aa17.32■□□□□ 0.36
CPSF4-201ENST00000292476 PPP2R2DQ66LE6 453 aa17.32■□□□□ 0.36
CPSF4-201ENST00000292476 SLC8B1Q6J4K2 584 aa17.32■□□□□ 0.36
CPSF4-201ENST00000292476 CYP4V2Q6ZWL3 525 aaPredicted RBP17.32■□□□□ 0.36
CPSF4-201ENST00000292476 GPR65Q8IYL9 337 aa17.32■□□□□ 0.36
CPSF4-201ENST00000292476 RNF168Q8IYW5 571 aaPredicted RBP17.32■□□□□ 0.36
CPSF4-201ENST00000292476 NAT8LQ8N9F0 302 aa17.32■□□□□ 0.36
CPSF4-201ENST00000292476 CCDC63Q8NA47 563 aa17.32■□□□□ 0.36
CPSF4-201ENST00000292476 SPATA17Q96L03 361 aa17.32■□□□□ 0.36
CPSF4-201ENST00000292476 SMC6Q96SB8 1091 aa17.32■□□□□ 0.36
CPSF4-201ENST00000292476 TMEM121Q9BTD3 319 aa17.32■□□□□ 0.36
CPSF4-201ENST00000292476 TRABDQ9H4I3 376 aa17.32■□□□□ 0.36
CPSF4-201ENST00000292476 RXFP1Q9HBX9 757 aa17.32■□□□□ 0.36
CPSF4-201ENST00000292476 HSFX1Q9UBD0 423 aa17.32■□□□□ 0.36
CPSF4-201ENST00000292476 TBK1Q9UHD2 729 aa17.32■□□□□ 0.36
CPSF4-201ENST00000292476 AP4E1Q9UPM8 1137 aa17.32■□□□□ 0.36
CPSF4-201ENST00000292476 STARD13Q9Y3M8 1113 aa17.32■□□□□ 0.36
CPSF4-201ENST00000292476 ARHGEF15O94989 841 aa17.32■□□□□ 0.36
CPSF4-201ENST00000292476 GEMIN4P57678 1058 aaKnown RBP17.32■□□□□ 0.36
CPSF4-201ENST00000292476 PDIA2Q13087 525 aaKnown RBP17.32■□□□□ 0.36
CPSF4-201ENST00000292476 DPYSL3Q14195 570 aa17.32■□□□□ 0.36
CPSF4-201ENST00000292476 BTBD8Q5XKL5 378 aa17.32■□□□□ 0.36
CPSF4-201ENST00000292476 PRUNE1Q86TP1 453 aa17.32■□□□□ 0.36
CPSF4-201ENST00000292476 MON1AQ86VX9 555 aa17.32■□□□□ 0.36
CPSF4-201ENST00000292476 ZBED8Q8IZ13 594 aa17.32■□□□□ 0.36
CPSF4-201ENST00000292476 SLC39A11Q8N1S5 342 aa17.32■□□□□ 0.36
CPSF4-201ENST00000292476 FBXO22Q8NEZ5 403 aa17.32■□□□□ 0.36
CPSF4-201ENST00000292476 SLC7A14Q8TBB6 771 aa17.32■□□□□ 0.36
CPSF4-201ENST00000292476 RSAD2Q8WXG1 361 aa17.32■□□□□ 0.36
CPSF4-201ENST00000292476 NTAN1Q96AB6 310 aa17.32■□□□□ 0.36
CPSF4-201ENST00000292476 ACSF2Q96CM8 615 aaPredicted RBP17.32■□□□□ 0.36
CPSF4-201ENST00000292476 RNF157Q96PX1 679 aa17.32■□□□□ 0.36
CPSF4-201ENST00000292476 VPS37BQ9H9H4 285 aa17.32■□□□□ 0.36
CPSF4-201ENST00000292476 ABCF3Q9NUQ8 709 aa17.32■□□□□ 0.36
CPSF4-201ENST00000292476 MTMR10Q9NXD2 777 aa17.32■□□□□ 0.36
CPSF4-201ENST00000292476 KLHL14Q9P2G3 628 aa17.32■□□□□ 0.36
CPSF4-201ENST00000292476 HCSTQ9UBK5 93 aa17.32■□□□□ 0.36
CPSF4-201ENST00000292476 SCML2Q9UQR0 700 aa17.32■□□□□ 0.36
CPSF4-201ENST00000292476 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.32■□□□□ 0.36
CPSF4-201ENST00000292476 MTMR11A4FU01 709 aa17.31■□□□□ 0.36
CPSF4-201ENST00000292476 ETS1P14921 441 aa17.31■□□□□ 0.36
CPSF4-201ENST00000292476 SLC8A1P32418 973 aa17.31■□□□□ 0.36
CPSF4-201ENST00000292476 PBX3P40426 434 aa17.31■□□□□ 0.36
CPSF4-201ENST00000292476 ARL4AP40617 200 aa17.31■□□□□ 0.36
CPSF4-201ENST00000292476 TUFMP49411 452 aaKnown RBP17.31■□□□□ 0.36
CPSF4-201ENST00000292476 PSEN1P49768 467 aa17.31■□□□□ 0.36
CPSF4-201ENST00000292476 GTF2A1P52655 376 aaPredicted RBP17.31■□□□□ 0.36
CPSF4-201ENST00000292476 ARPP19P56211 112 aa17.31■□□□□ 0.36
CPSF4-201ENST00000292476 YWHAGP61981 247 aaKnown RBP eCLIP17.31■□□□□ 0.36
CPSF4-201ENST00000292476 CREMQ03060 361 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms