RNA–Protein interactions for RNA: ENST00000290894.12

SHF-201, Transcript of Src homology 2 domain containing F, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SHF, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-201ENST00000290894 SDHAF4Q5VUM1 108 aa19.63■□□□□ 0.73
SHF-201ENST00000290894 FAM171BQ6P995 826 aa19.63■□□□□ 0.73
SHF-201ENST00000290894 BZW1Q7L1Q6 419 aaKnown RBP19.63■□□□□ 0.73
SHF-201ENST00000290894 RTN4RL1Q86UN2 441 aaPredicted RBP19.63■□□□□ 0.73
SHF-201ENST00000290894 KLHL8Q9P2G9 620 aaPredicted RBP19.63■□□□□ 0.73
SHF-201ENST00000290894 HACD1B0YJ81 288 aa19.62■□□□□ 0.73
SHF-201ENST00000290894 ACLYP53396 1101 aa19.62■□□□□ 0.73
SHF-201ENST00000290894 GSDMBQ8TAX9 411 aa19.62■□□□□ 0.73
SHF-201ENST00000290894 FRMD8Q9BZ67 464 aaPredicted RBP19.62■□□□□ 0.73
SHF-201ENST00000290894 SLC40A1Q9NP59 571 aa19.62■□□□□ 0.73
SHF-201ENST00000290894 PRG3Q9Y2Y8 225 aaPredicted RBP19.62■□□□□ 0.73
SHF-201ENST00000290894 PPP1R12AO14974 1030 aaPredicted RBP19.62■□□□□ 0.73
SHF-201ENST00000290894 MSI1O43347 362 aaKnown RBP19.62■□□□□ 0.73
SHF-201ENST00000290894 STK10O94804 968 aaKnown RBP19.62■□□□□ 0.73
SHF-201ENST00000290894 SP3Q02447 781 aa19.62■□□□□ 0.73
SHF-201ENST00000290894 MBTPS1Q14703 1052 aa19.62■□□□□ 0.73
SHF-201ENST00000290894 PAFAH1B3Q15102 231 aaKnown RBP19.62■□□□□ 0.73
SHF-201ENST00000290894 TRIM71Q2Q1W2 868 aaKnown RBP19.62■□□□□ 0.73
SHF-201ENST00000290894 TTC39BQ5VTQ0 682 aaPredicted RBP19.62■□□□□ 0.73
SHF-201ENST00000290894 OTOAQ7RTW8 1153 aa19.62■□□□□ 0.73
SHF-201ENST00000290894 STAMBPL1Q96FJ0 436 aa19.62■□□□□ 0.73
SHF-201ENST00000290894 CSNK1G1Q9HCP0 422 aa19.62■□□□□ 0.73
SHF-201ENST00000290894 XAB2Q9HCS7 855 aaKnown RBP19.62■□□□□ 0.73
SHF-201ENST00000290894 PNPLA8Q9NP80 782 aa19.62■□□□□ 0.73
SHF-201ENST00000290894 DMAP1Q9NPF5 467 aaPredicted RBP19.62■□□□□ 0.73
SHF-201ENST00000290894 DDHD2O94830 711 aa19.61■□□□□ 0.73
SHF-201ENST00000290894 LRIG2O94898 1065 aa19.61■□□□□ 0.73
SHF-201ENST00000290894 PRKCHP24723 683 aa19.61■□□□□ 0.73
SHF-201ENST00000290894 SEMA3BQ13214 749 aa19.61■□□□□ 0.73
SHF-201ENST00000290894 RWDD4Q6NW29 188 aaKnown RBP19.61■□□□□ 0.73
SHF-201ENST00000290894 SH2D5Q6ZV89 423 aa19.61■□□□□ 0.73
SHF-201ENST00000290894 ZNF276Q8N554 614 aa19.61■□□□□ 0.73
SHF-201ENST00000290894 ANKLE1Q8NAG6 615 aa19.61■□□□□ 0.73
SHF-201ENST00000290894 SFMBT1Q9UHJ3 866 aa19.61■□□□□ 0.73
SHF-201ENST00000290894 SLC12A4Q9UP95 1085 aa19.61■□□□□ 0.73
SHF-201ENST00000290894 VGLL3A8MV65 326 aa19.61■□□□□ 0.73
SHF-201ENST00000290894 EDF1O60869 148 aaKnown RBP19.61■□□□□ 0.73
SHF-201ENST00000290894 NEFHP12036 1026 aa19.61■□□□□ 0.73
SHF-201ENST00000290894 CKBP12277 381 aa19.61■□□□□ 0.73
SHF-201ENST00000290894 GRIK1P39086 918 aa19.61■□□□□ 0.73
SHF-201ENST00000290894 GLUD2P49448 558 aa19.61■□□□□ 0.73
SHF-201ENST00000290894 C4orf22Q6V702 233 aa19.61■□□□□ 0.73
SHF-201ENST00000290894 CNPY4Q8N129 248 aa19.61■□□□□ 0.73
SHF-201ENST00000290894 PCSK9Q8NBP7 692 aaKnown RBP19.61■□□□□ 0.73
SHF-201ENST00000290894 DQX1Q8TE96 717 aaKnown RBP19.61■□□□□ 0.73
SHF-201ENST00000290894 APOPT1Q96IL0 206 aa19.61■□□□□ 0.73
SHF-201ENST00000290894 APOL2Q9BQE5 337 aa19.61■□□□□ 0.73
SHF-201ENST00000290894 NPHS2Q9NP85 383 aa19.61■□□□□ 0.73
SHF-201ENST00000290894 UBP1Q9NZI7 540 aa19.61■□□□□ 0.73
SHF-201ENST00000290894 HMX2A2RU54 273 aa19.6■□□□□ 0.73
SHF-201ENST00000290894 OPHN1O60890 802 aa19.6■□□□□ 0.73
SHF-201ENST00000290894 KRT37O76014 449 aa19.6■□□□□ 0.73
SHF-201ENST00000290894 ARL13BQ3SXY8 428 aa19.6■□□□□ 0.73
SHF-201ENST00000290894 SCN4BQ8IWT1 228 aa19.6■□□□□ 0.73
SHF-201ENST00000290894 NTAN1Q96AB6 310 aa19.6■□□□□ 0.73
SHF-201ENST00000290894 OXNAD1Q96HP4 312 aaPredicted RBP19.6■□□□□ 0.73
SHF-201ENST00000290894 SRPK1Q96SB4 655 aaKnown RBP19.6■□□□□ 0.73
SHF-201ENST00000290894 SLC9A7Q96T83 725 aa19.6■□□□□ 0.73
SHF-201ENST00000290894 PKMYT1Q99640 499 aa19.6■□□□□ 0.73
SHF-201ENST00000290894 MECRQ9BV79 373 aa19.6■□□□□ 0.73
SHF-201ENST00000290894 SYBUQ9NX95 663 aa19.6■□□□□ 0.73
SHF-201ENST00000290894 DCTN4Q9UJW0 460 aa19.6■□□□□ 0.73
SHF-201ENST00000290894 TRIM33Q9UPN9 1127 aa19.6■□□□□ 0.73
SHF-201ENST00000290894 PCDHA11Q9Y5I1 949 aa19.6■□□□□ 0.73
SHF-201ENST00000290894 C9IYK1 514 aa19.6■□□□□ 0.73
SHF-201ENST00000290894 M0QZQ0 153 aa19.6■□□□□ 0.73
SHF-201ENST00000290894 PTPN3P26045 913 aa19.6■□□□□ 0.73
SHF-201ENST00000290894 FDFT1P37268 417 aa19.6■□□□□ 0.73
SHF-201ENST00000290894 SARNPP82979 210 aaKnown RBP19.6■□□□□ 0.73
SHF-201ENST00000290894 ZNF598Q86UK7 904 aaKnown RBP19.6■□□□□ 0.73
SHF-201ENST00000290894 LRRC39Q96DD0 335 aa19.6■□□□□ 0.73
SHF-201ENST00000290894 SSU72Q9NP77 194 aaKnown RBP19.6■□□□□ 0.73
SHF-201ENST00000290894 PCMTD2Q9NV79 361 aa19.6■□□□□ 0.73
SHF-201ENST00000290894 ABI2Q9NYB9 513 aaPredicted RBP19.6■□□□□ 0.73
SHF-201ENST00000290894 DNAJB4Q9UDY4 337 aa19.6■□□□□ 0.73
SHF-201ENST00000290894 COPEO14579 308 aa19.59■□□□□ 0.73
SHF-201ENST00000290894 TM9SF1O15321 606 aa19.59■□□□□ 0.73
SHF-201ENST00000290894 TOMM70O94826 608 aa19.59■□□□□ 0.73
SHF-201ENST00000290894 SNRPAP09012 282 aaKnown RBP19.59■□□□□ 0.73
SHF-201ENST00000290894 BGNP21810 368 aa19.59■□□□□ 0.73
SHF-201ENST00000290894 SLC5A3P53794 718 aa19.59■□□□□ 0.73
SHF-201ENST00000290894 YWHAHQ04917 246 aaPredicted RBP19.59■□□□□ 0.73
SHF-201ENST00000290894 SCAPQ12770 1279 aa19.59■□□□□ 0.73
SHF-201ENST00000290894 SLC39A12Q504Y0 691 aa19.59■□□□□ 0.73
SHF-201ENST00000290894 CLLU1OSQ5K130 101 aa19.59■□□□□ 0.73
SHF-201ENST00000290894 RNF180Q86T96 592 aa19.59■□□□□ 0.73
SHF-201ENST00000290894 TBC1D1Q86TI0 1168 aaPredicted RBP19.59■□□□□ 0.73
SHF-201ENST00000290894 KIF2BQ8N4N8 673 aa19.59■□□□□ 0.73
SHF-201ENST00000290894 OR52K1Q8NGK4 314 aa19.59■□□□□ 0.73
SHF-201ENST00000290894 CD99L2Q8TCZ2 262 aa19.59■□□□□ 0.73
SHF-201ENST00000290894 ARNTL2Q8WYA1 636 aa19.59■□□□□ 0.73
SHF-201ENST00000290894 STARD13Q9Y3M8 1113 aa19.59■□□□□ 0.73
SHF-201ENST00000290894 TRDMT1O14717 391 aaKnown RBP19.59■□□□□ 0.73
SHF-201ENST00000290894 ZBTB24O43167 697 aaPredicted RBP19.59■□□□□ 0.73
SHF-201ENST00000290894 TRPA1O75762 1119 aa19.59■□□□□ 0.73
SHF-201ENST00000290894 CYP11A1P05108 521 aa19.59■□□□□ 0.73
SHF-201ENST00000290894 HNRNPH1P31943 449 aaKnown RBP19.59■□□□□ 0.73
SHF-201ENST00000290894 OR1G1P47890 313 aa19.59■□□□□ 0.73
SHF-201ENST00000290894 CXCR3P49682 368 aa19.59■□□□□ 0.73
SHF-201ENST00000290894 NEK3P51956 506 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms