RNA–Protein interactions for RNA: ENST00000288462.4

C9orf43-201, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-201ENST00000288462 AP1B1Q10567 949 aa10.48□□□□□ -0.73
C9orf43-201ENST00000288462 MTM1Q13496 603 aa10.48□□□□□ -0.73
C9orf43-201ENST00000288462 EFTUD2Q15029 972 aaKnown RBP eCLIP10.48□□□□□ -0.73
C9orf43-201ENST00000288462 RTP2Q5QGT7 225 aa10.48□□□□□ -0.73
C9orf43-201ENST00000288462 SYCP2LQ5T4T6 812 aa10.48□□□□□ -0.73
C9orf43-201ENST00000288462 C3orf62Q6ZUJ4 267 aa10.48□□□□□ -0.73
C9orf43-201ENST00000288462 DENND5BQ6ZUT9 1274 aa10.48□□□□□ -0.73
C9orf43-201ENST00000288462 MON1AQ86VX9 555 aa10.48□□□□□ -0.73
C9orf43-201ENST00000288462 TMEM173Q86WV6 379 aaPredicted RBP10.48□□□□□ -0.73
C9orf43-201ENST00000288462 CEP57Q86XR8 500 aa10.48□□□□□ -0.73
C9orf43-201ENST00000288462 TP53INP2Q8IXH6 220 aa10.48□□□□□ -0.73
C9orf43-201ENST00000288462 PALM2Q8IXS6 379 aa10.48□□□□□ -0.73
C9orf43-201ENST00000288462 ARHGAP18Q8N392 663 aa10.48□□□□□ -0.73
C9orf43-201ENST00000288462 TTC9BQ8N6N2 239 aa10.48□□□□□ -0.73
C9orf43-201ENST00000288462 BCL7CQ8WUZ0 217 aaPredicted RBP10.48□□□□□ -0.73
C9orf43-201ENST00000288462 HDAC11Q96DB2 347 aa10.48□□□□□ -0.73
C9orf43-201ENST00000288462 B3GALT6Q96L58 329 aa10.48□□□□□ -0.73
C9orf43-201ENST00000288462 OXCT2Q9BYC2 517 aaPredicted RBP10.48□□□□□ -0.73
C9orf43-201ENST00000288462 XAB2Q9HCS7 855 aaKnown RBP10.48□□□□□ -0.73
C9orf43-201ENST00000288462 OSER1Q9NX31 292 aa10.48□□□□□ -0.73
C9orf43-201ENST00000288462 IGSF9Q9P2J2 1179 aa10.48□□□□□ -0.73
C9orf43-201ENST00000288462 TBK1Q9UHD2 729 aa10.48□□□□□ -0.73
C9orf43-201ENST00000288462 NR2E3Q9Y5X4 410 aa10.48□□□□□ -0.73
C9orf43-201ENST00000288462 SHROOM3Q8TF72 1996 aa10.48□□□□□ -0.73
C9orf43-201ENST00000288462 MTMR11A4FU01 709 aa10.48□□□□□ -0.73
C9orf43-201ENST00000288462 GMNCA6NCL1 334 aa10.48□□□□□ -0.73
C9orf43-201ENST00000288462 FOXO6A8MYZ6 492 aa10.48□□□□□ -0.73
C9orf43-201ENST00000288462 POC1B-GALNT4F8VUJ3 575 aa10.48□□□□□ -0.73
C9orf43-201ENST00000288462 NDUFAB1O14561 156 aa10.48□□□□□ -0.73
C9orf43-201ENST00000288462 MSI1O43347 362 aaKnown RBP10.48□□□□□ -0.73
C9orf43-201ENST00000288462 C1QAP02745 245 aa10.48□□□□□ -0.73
C9orf43-201ENST00000288462 GSTA2P09210 222 aa10.48□□□□□ -0.73
C9orf43-201ENST00000288462 MLNP12872 115 aa10.48□□□□□ -0.73
C9orf43-201ENST00000288462 CCR1P32246 355 aa10.48□□□□□ -0.73
C9orf43-201ENST00000288462 CCL23P55773 120 aa10.48□□□□□ -0.73
C9orf43-201ENST00000288462 USP46P62068 366 aa10.48□□□□□ -0.73
C9orf43-201ENST00000288462 NRG1Q02297 640 aaPredicted RBP10.48□□□□□ -0.73
C9orf43-201ENST00000288462 PPARDQ03181 441 aa10.48□□□□□ -0.73
C9orf43-201ENST00000288462 SMARCB1Q12824 385 aa10.48□□□□□ -0.73
C9orf43-201ENST00000288462 GPR17Q13304 367 aa10.48□□□□□ -0.73
C9orf43-201ENST00000288462 DDR2Q16832 855 aa10.48□□□□□ -0.73
C9orf43-201ENST00000288462 TRIM60Q495X7 471 aa10.48□□□□□ -0.73
C9orf43-201ENST00000288462 SDHAF4Q5VUM1 108 aa10.48□□□□□ -0.73
C9orf43-201ENST00000288462 RSPO2Q6UXX9 243 aaPredicted RBP10.48□□□□□ -0.73
C9orf43-201ENST00000288462 NETO2Q8NC67 525 aa10.48□□□□□ -0.73
C9orf43-201ENST00000288462 STKLD1Q8NE28 680 aa10.48□□□□□ -0.73
C9orf43-201ENST00000288462 SPPL2BQ8TCT7 592 aa10.48□□□□□ -0.73
C9orf43-201ENST00000288462 DPF3Q92784 378 aa10.48□□□□□ -0.73
C9orf43-201ENST00000288462 RNF34Q969K3 372 aa10.48□□□□□ -0.73
C9orf43-201ENST00000288462 SERPINB11Q96P15 392 aa10.48□□□□□ -0.73
C9orf43-201ENST00000288462 PGLYRP2Q96PD5 576 aa10.48□□□□□ -0.73
C9orf43-201ENST00000288462 PAFAH2Q99487 392 aa10.48□□□□□ -0.73
C9orf43-201ENST00000288462 PPP1R12CQ9BZL4 782 aa10.48□□□□□ -0.73
C9orf43-201ENST00000288462 PLAC1Q9HBJ0 212 aa10.48□□□□□ -0.73
C9orf43-201ENST00000288462 PPANQ9NQ55 473 aaKnown RBP10.48□□□□□ -0.73
C9orf43-201ENST00000288462 INTS9Q9NV88 658 aaKnown RBP10.48□□□□□ -0.73
C9orf43-201ENST00000288462 SENP1Q9P0U3 644 aa10.48□□□□□ -0.73
C9orf43-201ENST00000288462 TBX21Q9UL17 535 aa10.48□□□□□ -0.73
C9orf43-201ENST00000288462 TTLL3Q9Y4R7 772 aa10.48□□□□□ -0.73
C9orf43-201ENST00000288462 NYNRINQ9P2P1 1898 aaKnown RBP10.47□□□□□ -0.73
C9orf43-201ENST00000288462 TCRBV9S1A1TA0A576 114 aa10.47□□□□□ -0.73
C9orf43-201ENST00000288462 KCNU1A8MYU2 1149 aa10.47□□□□□ -0.73
C9orf43-201ENST00000288462 RASA4BC9J798 803 aa10.47□□□□□ -0.73
C9orf43-201ENST00000288462 H7C4K7 107 aa10.47□□□□□ -0.73
C9orf43-201ENST00000288462 MTSS1O43312 755 aa10.47□□□□□ -0.73
C9orf43-201ENST00000288462 RASA4O43374 803 aa10.47□□□□□ -0.73
C9orf43-201ENST00000288462 PAGE1O75459 146 aa10.47□□□□□ -0.73
C9orf43-201ENST00000288462 BRAFP15056 766 aa10.47□□□□□ -0.73
C9orf43-201ENST00000288462 CPB1P15086 417 aa10.47□□□□□ -0.73
C9orf43-201ENST00000288462 MX2P20592 715 aa10.47□□□□□ -0.73
C9orf43-201ENST00000288462 PTPN3P26045 913 aa10.47□□□□□ -0.73
C9orf43-201ENST00000288462 EPHB2P29323 1055 aa10.47□□□□□ -0.73
C9orf43-201ENST00000288462 TLE2Q04725 743 aa10.47□□□□□ -0.73
C9orf43-201ENST00000288462 PARP6Q2NL67 630 aa10.47□□□□□ -0.73
C9orf43-201ENST00000288462 ADGRD1Q6QNK2 874 aa10.47□□□□□ -0.73
C9orf43-201ENST00000288462 ANKS3Q6ZW76 656 aa10.47□□□□□ -0.73
C9orf43-201ENST00000288462 SRRM1Q8IYB3 904 aaKnown RBP10.47□□□□□ -0.73
C9orf43-201ENST00000288462 ZNF567Q8N184 647 aa10.47□□□□□ -0.73
C9orf43-201ENST00000288462 COLGALT1Q8NBJ5 622 aa10.47□□□□□ -0.73
C9orf43-201ENST00000288462 ATAD1Q8NBU5 361 aa10.47□□□□□ -0.73
C9orf43-201ENST00000288462 CCNYQ8ND76 341 aa10.47□□□□□ -0.73
C9orf43-201ENST00000288462 ZNF473Q8WTR7 871 aaKnown RBP10.47□□□□□ -0.73
C9orf43-201ENST00000288462 C2orf15Q8WU43 125 aaKnown RBP10.47□□□□□ -0.73
C9orf43-201ENST00000288462 DCAKDQ8WVC6 231 aa10.47□□□□□ -0.73
C9orf43-201ENST00000288462 VWCEQ96DN2 955 aa10.47□□□□□ -0.73
C9orf43-201ENST00000288462 SPATA17Q96L03 361 aa10.47□□□□□ -0.73
C9orf43-201ENST00000288462 SIGLEC10Q96LC7 697 aa10.47□□□□□ -0.73
C9orf43-201ENST00000288462 ZNF317Q96PQ6 595 aaPredicted RBP10.47□□□□□ -0.73
C9orf43-201ENST00000288462 CCT8L2Q96SF2 557 aa10.47□□□□□ -0.73
C9orf43-201ENST00000288462 CYTH2Q99418 400 aa10.47□□□□□ -0.73
C9orf43-201ENST00000288462 RABEP2Q9H5N1 569 aa10.47□□□□□ -0.73
C9orf43-201ENST00000288462 GMIPQ9P107 970 aa10.47□□□□□ -0.73
C9orf43-201ENST00000288462 SFMBT1Q9UHJ3 866 aa10.47□□□□□ -0.73
C9orf43-201ENST00000288462 FGF10O15520 208 aaPredicted RBP10.46□□□□□ -0.73
C9orf43-201ENST00000288462 RTN3O95197 1032 aaPredicted RBP10.46□□□□□ -0.73
C9orf43-201ENST00000288462 STX2P32856 288 aa10.46□□□□□ -0.73
C9orf43-201ENST00000288462 PBX3P40426 434 aa10.46□□□□□ -0.73
C9orf43-201ENST00000288462 GARSP41250 739 aaKnown RBP10.46□□□□□ -0.73
C9orf43-201ENST00000288462 ZNF33AQ06730 810 aa10.46□□□□□ -0.73
C9orf43-201ENST00000288462 MPP2Q14168 576 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms