RNA–Protein interactions for RNA: ENST00000288398.10

TPM1-202, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-202ENST00000288398 ZNF776Q68DI1 518 aaPredicted RBP14.59□□□□□ -0.07
TPM1-202ENST00000288398 LRSAM1Q6UWE0 723 aa14.59□□□□□ -0.07
TPM1-202ENST00000288398 ADAT2Q7Z6V5 191 aaKnown RBP14.59□□□□□ -0.07
TPM1-202ENST00000288398 CARNMT1Q8N4J0 409 aa14.59□□□□□ -0.07
TPM1-202ENST00000288398 ZNF366Q8N895 744 aa14.59□□□□□ -0.07
TPM1-202ENST00000288398 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.59□□□□□ -0.07
TPM1-202ENST00000288398 KLK13Q9UKR3 277 aa14.59□□□□□ -0.07
TPM1-202ENST00000288398 WASF3Q9UPY6 502 aa14.59□□□□□ -0.07
TPM1-202ENST00000288398 ADAMTS9Q9P2N4 1935 aa14.58□□□□□ -0.07
TPM1-202ENST00000288398 SEMA4FO95754 770 aa14.58□□□□□ -0.08
TPM1-202ENST00000288398 MOCS2O96007 188 aaPredicted RBP14.58□□□□□ -0.08
TPM1-202ENST00000288398 ASLP04424 464 aa14.58□□□□□ -0.08
TPM1-202ENST00000288398 PAK1Q13153 545 aa14.58□□□□□ -0.08
TPM1-202ENST00000288398 PIK3R6Q5UE93 754 aa14.58□□□□□ -0.08
TPM1-202ENST00000288398 ADIPOR2Q86V24 386 aa14.58□□□□□ -0.08
TPM1-202ENST00000288398 CREBRFQ8IUR6 639 aa14.58□□□□□ -0.08
TPM1-202ENST00000288398 ELOA2Q8IYF1 753 aaPredicted RBP14.58□□□□□ -0.08
TPM1-202ENST00000288398 CHCHD4Q8N4Q1 142 aa14.58□□□□□ -0.08
TPM1-202ENST00000288398 EHBP1Q8NDI1 1231 aa14.58□□□□□ -0.08
TPM1-202ENST00000288398 GATA6Q92908 595 aa14.58□□□□□ -0.08
TPM1-202ENST00000288398 AZIN2Q96A70 460 aa14.58□□□□□ -0.08
TPM1-202ENST00000288398 CAMK1GQ96NX5 476 aa14.58□□□□□ -0.08
TPM1-202ENST00000288398 TMEM245Q9H330 911 aa14.58□□□□□ -0.08
TPM1-202ENST00000288398 SGK2Q9HBY8 427 aa14.58□□□□□ -0.08
TPM1-202ENST00000288398 TM7SF3Q9NS93 570 aa14.58□□□□□ -0.08
TPM1-202ENST00000288398 TJP2Q9UDY2 1190 aa14.58□□□□□ -0.08
TPM1-202ENST00000288398 SCML1Q9UN30 329 aa14.58□□□□□ -0.08
TPM1-202ENST00000288398 TLR6Q9Y2C9 796 aa14.58□□□□□ -0.08
TPM1-202ENST00000288398 PCDH15Q96QU1 1955 aa14.57□□□□□ -0.08
TPM1-202ENST00000288398 GOLGA6L7A0A1B0GV03 622 aa14.57□□□□□ -0.08
TPM1-202ENST00000288398 BIN1O00499 593 aa14.57□□□□□ -0.08
TPM1-202ENST00000288398 FSBPO95073 299 aa14.57□□□□□ -0.08
TPM1-202ENST00000288398 IGLV3-27P01718 113 aa14.57□□□□□ -0.08
TPM1-202ENST00000288398 FTH1P19P0C7X4 201 aa14.57□□□□□ -0.08
TPM1-202ENST00000288398 CD44P16070 742 aaKnown RBP14.57□□□□□ -0.08
TPM1-202ENST00000288398 CD70P32970 193 aa14.57□□□□□ -0.08
TPM1-202ENST00000288398 SGSHP51688 502 aa14.57□□□□□ -0.08
TPM1-202ENST00000288398 STX17P56962 302 aa14.57□□□□□ -0.08
TPM1-202ENST00000288398 RPS14P62263 151 aaKnown RBP14.57□□□□□ -0.08
TPM1-202ENST00000288398 FAM193AP78312 1265 aa14.57□□□□□ -0.08
TPM1-202ENST00000288398 KCNH2Q12809 1159 aa14.57□□□□□ -0.08
TPM1-202ENST00000288398 HLA-BQ31612 363 aa14.57□□□□□ -0.08
TPM1-202ENST00000288398 TTI2Q6NXR4 508 aa14.57□□□□□ -0.08
TPM1-202ENST00000288398 FOXR2Q6PJQ5 311 aa14.57□□□□□ -0.08
TPM1-202ENST00000288398 ARHGEF19Q8IW93 802 aa14.57□□□□□ -0.08
TPM1-202ENST00000288398 SCUBE3Q8IX30 993 aa14.57□□□□□ -0.08
TPM1-202ENST00000288398 DQX1Q8TE96 717 aaKnown RBP14.57□□□□□ -0.08
TPM1-202ENST00000288398 CLEC4CQ8WTT0 213 aa14.57□□□□□ -0.08
TPM1-202ENST00000288398 KAT5Q92993 513 aa14.57□□□□□ -0.08
TPM1-202ENST00000288398 SKA1Q96BD8 255 aa14.57□□□□□ -0.08
TPM1-202ENST00000288398 FAM81BQ96LP2 452 aa14.57□□□□□ -0.08
TPM1-202ENST00000288398 INTS2Q9H0H0 1204 aaKnown RBP14.57□□□□□ -0.08
TPM1-202ENST00000288398 PRSS16Q9NQE7 514 aa14.57□□□□□ -0.08
TPM1-202ENST00000288398 SLC12A6Q9UHW9 1150 aa14.57□□□□□ -0.08
TPM1-202ENST00000288398 GTF3C3Q9Y5Q9 886 aa14.57□□□□□ -0.08
TPM1-202ENST00000288398 A0A1B0GVT2 93 aa14.56□□□□□ -0.08
TPM1-202ENST00000288398 FAM47DPA6NHR8 397 aa14.56□□□□□ -0.08
TPM1-202ENST00000288398 RNF225M0QZC1 329 aaPredicted RBP14.56□□□□□ -0.08
TPM1-202ENST00000288398 FLRT2O43155 660 aa14.56□□□□□ -0.08
TPM1-202ENST00000288398 THAP12O43422 761 aa14.56□□□□□ -0.08
TPM1-202ENST00000288398 GJB3O75712 270 aa14.56□□□□□ -0.08
TPM1-202ENST00000288398 LETM1O95202 739 aaPredicted RBP14.56□□□□□ -0.08
TPM1-202ENST00000288398 ZNF883P0CG24 379 aa14.56□□□□□ -0.08
TPM1-202ENST00000288398 SLC6A4P31645 630 aa14.56□□□□□ -0.08
TPM1-202ENST00000288398 ACSL1P33121 698 aa14.56□□□□□ -0.08
TPM1-202ENST00000288398 NNMTP40261 264 aa14.56□□□□□ -0.08
TPM1-202ENST00000288398 USP8P40818 1118 aa14.56□□□□□ -0.08
TPM1-202ENST00000288398 CSNK1EP49674 416 aaKnown RBP14.56□□□□□ -0.08
TPM1-202ENST00000288398 C21orf59P57076 290 aa14.56□□□□□ -0.08
TPM1-202ENST00000288398 NNTQ13423 1086 aa14.56□□□□□ -0.08
TPM1-202ENST00000288398 PTPRNQ16849 979 aa14.56□□□□□ -0.08
TPM1-202ENST00000288398 INAVAQ3KP66 663 aa14.56□□□□□ -0.08
TPM1-202ENST00000288398 ENOSF1Q7L5Y1 443 aa14.56□□□□□ -0.08
TPM1-202ENST00000288398 CHSY1Q86X52 802 aa14.56□□□□□ -0.08
TPM1-202ENST00000288398 FIBINQ8TAL6 211 aa14.56□□□□□ -0.08
TPM1-202ENST00000288398 ADAM32Q8TC27 787 aa14.56□□□□□ -0.08
TPM1-202ENST00000288398 MED15Q96RN5 788 aa14.56□□□□□ -0.08
TPM1-202ENST00000288398 CDC6Q99741 560 aa14.56□□□□□ -0.08
TPM1-202ENST00000288398 SRRTQ9BXP5 876 aaKnown RBP14.56□□□□□ -0.08
TPM1-202ENST00000288398 C6orf106Q9H6K1 298 aaPredicted RBP14.56□□□□□ -0.08
TPM1-202ENST00000288398 UBE2TQ9NPD8 197 aaPredicted RBP14.56□□□□□ -0.08
TPM1-202ENST00000288398 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.56□□□□□ -0.08
TPM1-202ENST00000288398 FRYQ5TBA9 3013 aa14.55□□□□□ -0.08
TPM1-202ENST00000288398 CALCAP01258 141 aa14.55□□□□□ -0.08
TPM1-202ENST00000288398 GNA15P30679 374 aa14.55□□□□□ -0.08
TPM1-202ENST00000288398 CSKP41240 450 aa14.55□□□□□ -0.08
TPM1-202ENST00000288398 RPS24P62847 133 aaKnown RBP14.55□□□□□ -0.08
TPM1-202ENST00000288398 MORC3Q14149 939 aa14.55□□□□□ -0.08
TPM1-202ENST00000288398 FAM133BQ5BKY9 247 aaKnown RBP14.55□□□□□ -0.08
TPM1-202ENST00000288398 RAB44Q7Z6P3 723 aaPredicted RBP14.55□□□□□ -0.08
TPM1-202ENST00000288398 KIAA0907Q7Z7F0 614 aaPredicted RBP14.55□□□□□ -0.08
TPM1-202ENST00000288398 TRIM59Q8IWR1 403 aa14.55□□□□□ -0.08
TPM1-202ENST00000288398 LGI2Q8N0V4 545 aa14.55□□□□□ -0.08
TPM1-202ENST00000288398 ATP6V0D2Q8N8Y2 350 aa14.55□□□□□ -0.08
TPM1-202ENST00000288398 WFDC5Q8TCV5 224 aa14.55□□□□□ -0.08
TPM1-202ENST00000288398 RHBDD1Q8TEB9 315 aa14.55□□□□□ -0.08
TPM1-202ENST00000288398 RNF34Q969K3 372 aa14.55□□□□□ -0.08
TPM1-202ENST00000288398 FCRL2Q96LA5 508 aaPredicted RBP14.55□□□□□ -0.08
TPM1-202ENST00000288398 OMDQ99983 421 aa14.55□□□□□ -0.08
TPM1-202ENST00000288398 FAM204AQ9H8W3 233 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms