RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 WBP2Q969T9 261 aa19.53■□□□□ 0.72
PDLIM3-202ENST00000284770 DDX47Q9H0S4 455 aaKnown RBP19.53■□□□□ 0.72
PDLIM3-202ENST00000284770 ARHGEF4Q9NR80 690 aa19.53■□□□□ 0.72
PDLIM3-202ENST00000284770 CLDND1Q9NY35 253 aa19.53■□□□□ 0.72
PDLIM3-202ENST00000284770 DAPK3O43293 454 aa19.52■□□□□ 0.72
PDLIM3-202ENST00000284770 GREM1O60565 184 aa19.52■□□□□ 0.72
PDLIM3-202ENST00000284770 TBX10O75333 385 aa19.52■□□□□ 0.72
PDLIM3-202ENST00000284770 AMPD1P23109 780 aa19.52■□□□□ 0.72
PDLIM3-202ENST00000284770 DYNLT1P63172 113 aa19.52■□□□□ 0.72
PDLIM3-202ENST00000284770 DLX2Q07687 328 aaPredicted RBP19.52■□□□□ 0.72
PDLIM3-202ENST00000284770 AUHQ13825 339 aaKnown RBP19.52■□□□□ 0.72
PDLIM3-202ENST00000284770 CYP1B1Q16678 543 aa19.52■□□□□ 0.72
PDLIM3-202ENST00000284770 ARTNQ5T4W7 220 aa19.52■□□□□ 0.72
PDLIM3-202ENST00000284770 KLHL7Q8IXQ5 586 aa19.52■□□□□ 0.72
PDLIM3-202ENST00000284770 ING5Q8WYH8 240 aa19.52■□□□□ 0.72
PDLIM3-202ENST00000284770 ANKRD7Q92527 254 aa19.52■□□□□ 0.72
PDLIM3-202ENST00000284770 ZSWIM3Q96MP5 696 aa19.52■□□□□ 0.72
PDLIM3-202ENST00000284770 PNKPQ96T60 521 aa19.52■□□□□ 0.72
PDLIM3-202ENST00000284770 PRMT1Q99873 361 aaKnown RBP19.52■□□□□ 0.72
PDLIM3-202ENST00000284770 DCLK3Q9C098 648 aa19.52■□□□□ 0.72
PDLIM3-202ENST00000284770 S1PR5Q9H228 398 aa19.52■□□□□ 0.72
PDLIM3-202ENST00000284770 STIM2Q9P246 746 aa19.52■□□□□ 0.72
PDLIM3-202ENST00000284770 AGO1Q9UL18 857 aaKnown RBP19.52■□□□□ 0.72
PDLIM3-202ENST00000284770 E9PAM4 449 aa19.52■□□□□ 0.71
PDLIM3-202ENST00000284770 APOL1O14791 398 aa19.52■□□□□ 0.71
PDLIM3-202ENST00000284770 LATS1O95835 1130 aa19.52■□□□□ 0.71
PDLIM3-202ENST00000284770 ZFXP17010 805 aaPredicted RBP19.52■□□□□ 0.71
PDLIM3-202ENST00000284770 FSHRP23945 695 aa19.52■□□□□ 0.71
PDLIM3-202ENST00000284770 EPHB2P29323 1055 aa19.52■□□□□ 0.71
PDLIM3-202ENST00000284770 HOXC13P31276 330 aa19.52■□□□□ 0.71
PDLIM3-202ENST00000284770 GLE1Q53GS7 698 aaKnown RBP19.52■□□□□ 0.71
PDLIM3-202ENST00000284770 NADSYN1Q6IA69 706 aa19.52■□□□□ 0.71
PDLIM3-202ENST00000284770 C8orf74Q6P047 294 aa19.52■□□□□ 0.71
PDLIM3-202ENST00000284770 POTEHQ6S545 545 aa19.52■□□□□ 0.71
PDLIM3-202ENST00000284770 C14orf80Q86SX3 495 aa19.52■□□□□ 0.71
PDLIM3-202ENST00000284770 ZNF683Q8IZ20 524 aa19.52■□□□□ 0.71
PDLIM3-202ENST00000284770 PLD5Q8N7P1 536 aa19.52■□□□□ 0.71
PDLIM3-202ENST00000284770 PARD6BQ9BYG5 372 aa19.52■□□□□ 0.71
PDLIM3-202ENST00000284770 SMG9Q9H0W8 520 aaKnown RBP19.52■□□□□ 0.71
PDLIM3-202ENST00000284770 TARSL2A2RTX5 802 aaKnown RBP19.51■□□□□ 0.71
PDLIM3-202ENST00000284770 APOC4-APOC2K7ER74 178 aa19.51■□□□□ 0.71
PDLIM3-202ENST00000284770 LEFTY2O00292 366 aa19.51■□□□□ 0.71
PDLIM3-202ENST00000284770 APOC2P02655 101 aa19.51■□□□□ 0.71
PDLIM3-202ENST00000284770 LTBRP36941 435 aa19.51■□□□□ 0.71
PDLIM3-202ENST00000284770 CBX2Q14781 532 aaPredicted RBP19.51■□□□□ 0.71
PDLIM3-202ENST00000284770 FAM133BQ5BKY9 247 aaKnown RBP19.51■□□□□ 0.71
PDLIM3-202ENST00000284770 ATAT1Q5SQI0 421 aa19.51■□□□□ 0.71
PDLIM3-202ENST00000284770 RAP1GAP2Q684P5 730 aa19.51■□□□□ 0.71
PDLIM3-202ENST00000284770 CES5AQ6NT32 575 aa19.51■□□□□ 0.71
PDLIM3-202ENST00000284770 LRRC31Q6UY01 552 aa19.51■□□□□ 0.71
PDLIM3-202ENST00000284770 Q6ZNB5 142 aa19.51■□□□□ 0.71
PDLIM3-202ENST00000284770 HTR3DQ70Z44 454 aa19.51■□□□□ 0.71
PDLIM3-202ENST00000284770 DDX42Q86XP3 938 aaKnown RBP eCLIP19.51■□□□□ 0.71
PDLIM3-202ENST00000284770 C12orf50Q8NA57 414 aaPredicted RBP19.51■□□□□ 0.71
PDLIM3-202ENST00000284770 TTC13Q8NBP0 860 aa19.51■□□□□ 0.71
PDLIM3-202ENST00000284770 USP13Q92995 863 aaPredicted RBP19.51■□□□□ 0.71
PDLIM3-202ENST00000284770 TBC1D31Q96DN5 1066 aa19.51■□□□□ 0.71
PDLIM3-202ENST00000284770 PABPC5Q96DU9 382 aaKnown RBP19.51■□□□□ 0.71
PDLIM3-202ENST00000284770 HOMER3Q9NSC5 361 aa19.51■□□□□ 0.71
PDLIM3-202ENST00000284770 TDP1Q9NUW8 608 aa19.51■□□□□ 0.71
PDLIM3-202ENST00000284770 CFAP97Q9P2B7 532 aa19.51■□□□□ 0.71
PDLIM3-202ENST00000284770 PPARGC1AQ9UBK2 798 aaKnown RBP19.51■□□□□ 0.71
PDLIM3-202ENST00000284770 CDH22Q9UJ99 828 aa19.51■□□□□ 0.71
PDLIM3-202ENST00000284770 STOML2Q9UJZ1 356 aa19.51■□□□□ 0.71
PDLIM3-202ENST00000284770 VANGL2Q9ULK5 521 aa19.51■□□□□ 0.71
PDLIM3-202ENST00000284770 NEU3Q9UQ49 428 aa19.51■□□□□ 0.71
PDLIM3-202ENST00000284770 GOLGA6L7A0A1B0GV03 622 aa19.5■□□□□ 0.71
PDLIM3-202ENST00000284770 PHF2O75151 1096 aa19.5■□□□□ 0.71
PDLIM3-202ENST00000284770 ERCC2P18074 760 aa19.5■□□□□ 0.71
PDLIM3-202ENST00000284770 TACR2P21452 398 aa19.5■□□□□ 0.71
PDLIM3-202ENST00000284770 TGM2P21980 687 aa19.5■□□□□ 0.71
PDLIM3-202ENST00000284770 WEE1P30291 646 aa19.5■□□□□ 0.71
PDLIM3-202ENST00000284770 MRPS25P82663 173 aaKnown RBP19.5■□□□□ 0.71
PDLIM3-202ENST00000284770 ADGRF1Q5T601 910 aa19.5■□□□□ 0.71
PDLIM3-202ENST00000284770 RWDD4Q6NW29 188 aaKnown RBP19.5■□□□□ 0.71
PDLIM3-202ENST00000284770 FBXL22Q6P050 247 aa19.5■□□□□ 0.71
PDLIM3-202ENST00000284770 EP400NLQ6ZTU2 488 aa19.5■□□□□ 0.71
PDLIM3-202ENST00000284770 CHSY1Q86X52 802 aa19.5■□□□□ 0.71
PDLIM3-202ENST00000284770 ETNK2Q9NVF9 386 aa19.5■□□□□ 0.71
PDLIM3-202ENST00000284770 DMGDHQ9UI17 866 aaKnown RBP19.5■□□□□ 0.71
PDLIM3-202ENST00000284770 LSM7Q9UK45 103 aaKnown RBP19.5■□□□□ 0.71
PDLIM3-202ENST00000284770 RAB21Q9UL25 225 aa19.5■□□□□ 0.71
PDLIM3-202ENST00000284770 CCL26Q9Y258 94 aa19.5■□□□□ 0.71
PDLIM3-202ENST00000284770 ZNF510Q9Y2H8 683 aa19.5■□□□□ 0.71
PDLIM3-202ENST00000284770 R3HDM2Q9Y2K5 976 aaKnown RBP19.5■□□□□ 0.71
PDLIM3-202ENST00000284770 SH3BP1Q9Y3L3 701 aa19.5■□□□□ 0.71
PDLIM3-202ENST00000284770 IGLV3-10A0A075B6K4 115 aa19.49■□□□□ 0.71
PDLIM3-202ENST00000284770 DCLK1O15075 740 aa19.49■□□□□ 0.71
PDLIM3-202ENST00000284770 RAD51CO43502 376 aa19.49■□□□□ 0.71
PDLIM3-202ENST00000284770 CCNG2Q16589 344 aa19.49■□□□□ 0.71
PDLIM3-202ENST00000284770 NCBP2-AS2Q69YL0 99 aa19.49■□□□□ 0.71
PDLIM3-202ENST00000284770 CCDC70Q6NSX1 233 aa19.49■□□□□ 0.71
PDLIM3-202ENST00000284770 GPR153Q6NV75 609 aa19.49■□□□□ 0.71
PDLIM3-202ENST00000284770 ARID3BQ8IVW6 561 aaPredicted RBP19.49■□□□□ 0.71
PDLIM3-202ENST00000284770 MICALL1Q8N3F8 863 aa19.49■□□□□ 0.71
PDLIM3-202ENST00000284770 SH3RF2Q8TEC5 729 aa19.49■□□□□ 0.71
PDLIM3-202ENST00000284770 C1orf54Q8WWF1 131 aa19.49■□□□□ 0.71
PDLIM3-202ENST00000284770 MSLNLQ96KJ4 702 aa19.49■□□□□ 0.71
PDLIM3-202ENST00000284770 DDX50Q9BQ39 737 aaKnown RBP19.49■□□□□ 0.71
PDLIM3-202ENST00000284770 LRRC19Q9H756 370 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms