RNA–Protein interactions for RNA: ENST00000282074.6

SPC25-201, Transcript of SPC25, NDC80 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPC25, Length 1,354 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC25-201ENST00000282074 MARCH2Q9P0N8 246 aa12.52□□□□□ -0.41
SPC25-201ENST00000282074 ADAMTS1Q9UHI8 967 aa12.52□□□□□ -0.41
SPC25-201ENST00000282074 TPX2Q9ULW0 747 aaKnown RBP12.52□□□□□ -0.41
SPC25-201ENST00000282074 USP3Q9Y6I4 520 aa12.52□□□□□ -0.41
SPC25-201ENST00000282074 MGAQ8IWI9 3026 aa12.51□□□□□ -0.41
SPC25-201ENST00000282074 DLDP09622 509 aaKnown RBP12.51□□□□□ -0.41
SPC25-201ENST00000282074 C6P13671 934 aa12.51□□□□□ -0.41
SPC25-201ENST00000282074 EPHA8P29322 1005 aaPredicted RBP12.51□□□□□ -0.41
SPC25-201ENST00000282074 HLA-FP30511 346 aa12.51□□□□□ -0.41
SPC25-201ENST00000282074 HARS2P49590 506 aaKnown RBP12.51□□□□□ -0.41
SPC25-201ENST00000282074 CASP4P49662 377 aa12.51□□□□□ -0.41
SPC25-201ENST00000282074 GALCP54803 685 aa12.51□□□□□ -0.41
SPC25-201ENST00000282074 PCBP4P57723 403 aaKnown RBP12.51□□□□□ -0.41
SPC25-201ENST00000282074 ASIC1P78348 528 aa12.51□□□□□ -0.41
SPC25-201ENST00000282074 CLDN10P78369 228 aa12.51□□□□□ -0.41
SPC25-201ENST00000282074 SHBQ15464 509 aa12.51□□□□□ -0.41
SPC25-201ENST00000282074 FAM217AQ8IXS0 508 aa12.51□□□□□ -0.41
SPC25-201ENST00000282074 LSMEM2Q8N112 164 aa12.51□□□□□ -0.41
SPC25-201ENST00000282074 DCBLD1Q8N8Z6 715 aa12.51□□□□□ -0.41
SPC25-201ENST00000282074 FAM181AQ8N9Y4 354 aa12.51□□□□□ -0.41
SPC25-201ENST00000282074 PARD3BQ8TEW8 1205 aa12.51□□□□□ -0.41
SPC25-201ENST00000282074 PLD4Q96BZ4 506 aa12.51□□□□□ -0.41
SPC25-201ENST00000282074 TMA16Q96EY4 203 aaKnown RBP12.51□□□□□ -0.41
SPC25-201ENST00000282074 ZNF578Q96N58 590 aaPredicted RBP12.51□□□□□ -0.41
SPC25-201ENST00000282074 NT5C1AQ9BXI3 368 aa12.51□□□□□ -0.41
SPC25-201ENST00000282074 RSPH9Q9H1X1 276 aaPredicted RBP12.51□□□□□ -0.41
SPC25-201ENST00000282074 PABPC3Q9H361 631 aaKnown RBP12.51□□□□□ -0.41
SPC25-201ENST00000282074 HMGXB4Q9UGU5 601 aa12.51□□□□□ -0.41
SPC25-201ENST00000282074 GGA2Q9UJY4 613 aa12.51□□□□□ -0.41
SPC25-201ENST00000282074 A0A087X0B3 334 aa12.5□□□□□ -0.41
SPC25-201ENST00000282074 LRRIQ3A6PVS8 624 aaPredicted RBP12.5□□□□□ -0.41
SPC25-201ENST00000282074 VNN1O95497 513 aa12.5□□□□□ -0.41
SPC25-201ENST00000282074 WNT1P04628 370 aa12.5□□□□□ -0.41
SPC25-201ENST00000282074 POLR2EP19388 210 aaKnown RBP12.5□□□□□ -0.41
SPC25-201ENST00000282074 HOXD9P28356 352 aaPredicted RBP12.5□□□□□ -0.41
SPC25-201ENST00000282074 CLCN1P35523 988 aa12.5□□□□□ -0.41
SPC25-201ENST00000282074 RXRGP48443 463 aa12.5□□□□□ -0.41
SPC25-201ENST00000282074 CEBPZQ03701 1054 aaKnown RBP12.5□□□□□ -0.41
SPC25-201ENST00000282074 ARHGAP40Q5TG30 622 aa12.5□□□□□ -0.41
SPC25-201ENST00000282074 MBLAC2Q68D91 279 aa12.5□□□□□ -0.41
SPC25-201ENST00000282074 NCEH1Q6PIU2 408 aa12.5□□□□□ -0.41
SPC25-201ENST00000282074 ADIPOR2Q86V24 386 aa12.5□□□□□ -0.41
SPC25-201ENST00000282074 FMNL3Q8IVF7 1028 aa12.5□□□□□ -0.41
SPC25-201ENST00000282074 GOLGA5Q8TBA6 731 aa12.5□□□□□ -0.41
SPC25-201ENST00000282074 ANP32BQ92688 251 aaKnown RBP12.5□□□□□ -0.41
SPC25-201ENST00000282074 ELMO3Q96BJ8 720 aa12.5□□□□□ -0.41
SPC25-201ENST00000282074 OMDQ99983 421 aa12.5□□□□□ -0.41
SPC25-201ENST00000282074 DUSP16Q9BY84 665 aa12.5□□□□□ -0.41
SPC25-201ENST00000282074 CUEDC2Q9H467 287 aa12.5□□□□□ -0.41
SPC25-201ENST00000282074 ERVMER34-1Q9H9K5 563 aa12.5□□□□□ -0.41
SPC25-201ENST00000282074 ABCB8Q9NUT2 735 aa12.5□□□□□ -0.41
SPC25-201ENST00000282074 KBTBD4Q9NVX7 518 aa12.5□□□□□ -0.41
SPC25-201ENST00000282074 TFIP11Q9UBB9 837 aaKnown RBP12.5□□□□□ -0.41
SPC25-201ENST00000282074 MYLKQ15746 1914 aa12.5□□□□□ -0.41
SPC25-201ENST00000282074 A0A1W2PR77 199 aa12.49□□□□□ -0.41
SPC25-201ENST00000282074 VPS37CA5D8V6 355 aaPredicted RBP12.49□□□□□ -0.41
SPC25-201ENST00000282074 TLR4O00206 839 aa12.49□□□□□ -0.41
SPC25-201ENST00000282074 MT-CO3P00414 261 aa12.49□□□□□ -0.41
SPC25-201ENST00000282074 PABPC1P11940 636 aaKnown RBP12.49□□□□□ -0.41
SPC25-201ENST00000282074 ACP1P24666 158 aa12.49□□□□□ -0.41
SPC25-201ENST00000282074 ASPAP45381 313 aa12.49□□□□□ -0.41
SPC25-201ENST00000282074 CCR5P51681 352 aa12.49□□□□□ -0.41
SPC25-201ENST00000282074 ST8SIA6P61647 398 aa12.49□□□□□ -0.41
SPC25-201ENST00000282074 INSM1Q01101 510 aaPredicted RBP12.49□□□□□ -0.41
SPC25-201ENST00000282074 INCA1Q0VD86 236 aa12.49□□□□□ -0.41
SPC25-201ENST00000282074 BNIP3Q12983 259 aa12.49□□□□□ -0.41
SPC25-201ENST00000282074 TRIP4Q15650 581 aaPredicted RBP12.49□□□□□ -0.41
SPC25-201ENST00000282074 KDM7AQ6ZMT4 941 aa12.49□□□□□ -0.41
SPC25-201ENST00000282074 KIAA0907Q7Z7F0 614 aaPredicted RBP12.49□□□□□ -0.41
SPC25-201ENST00000282074 DHX40Q8IX18 779 aaKnown RBP12.49□□□□□ -0.41
SPC25-201ENST00000282074 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.49□□□□□ -0.41
SPC25-201ENST00000282074 OR2T34Q8NGX1 318 aa12.49□□□□□ -0.41
SPC25-201ENST00000282074 PLEKHO2Q8TD55 490 aa12.49□□□□□ -0.41
SPC25-201ENST00000282074 NAF1Q96HR8 494 aaKnown RBP12.49□□□□□ -0.41
SPC25-201ENST00000282074 SERAC1Q96JX3 654 aa12.49□□□□□ -0.41
SPC25-201ENST00000282074 PPP1R9BQ96SB3 815 aa12.49□□□□□ -0.41
SPC25-201ENST00000282074 NEUROG2Q9H2A3 272 aa12.49□□□□□ -0.41
SPC25-201ENST00000282074 CYP3A43Q9HB55 503 aa12.49□□□□□ -0.41
SPC25-201ENST00000282074 OLA1Q9NTK5 396 aaKnown RBP12.49□□□□□ -0.41
SPC25-201ENST00000282074 MAGEC1O60732 1142 aa12.48□□□□□ -0.41
SPC25-201ENST00000282074 RNASEH2AO75792 299 aaKnown RBP12.48□□□□□ -0.41
SPC25-201ENST00000282074 WISP1O95388 367 aa12.48□□□□□ -0.41
SPC25-201ENST00000282074 ASS1P00966 412 aaKnown RBP12.48□□□□□ -0.41
SPC25-201ENST00000282074 SLFN14P0C7P3 912 aa12.48□□□□□ -0.41
SPC25-201ENST00000282074 PDCP20941 246 aa12.48□□□□□ -0.41
SPC25-201ENST00000282074 NXPH1P58417 271 aa12.48□□□□□ -0.41
SPC25-201ENST00000282074 YWHAGP61981 247 aaKnown RBP eCLIP12.48□□□□□ -0.41
SPC25-201ENST00000282074 KNOP1Q1ED39 458 aaKnown RBP12.48□□□□□ -0.41
SPC25-201ENST00000282074 ZACNQ401N2 412 aa12.48□□□□□ -0.41
SPC25-201ENST00000282074 ADGRF1Q5T601 910 aa12.48□□□□□ -0.41
SPC25-201ENST00000282074 SFMBT2Q5VUG0 894 aa12.48□□□□□ -0.41
SPC25-201ENST00000282074 CNNM4Q6P4Q7 775 aa12.48□□□□□ -0.41
SPC25-201ENST00000282074 ZNF557Q8N988 423 aaPredicted RBP12.48□□□□□ -0.41
SPC25-201ENST00000282074 UBXN6Q9BZV1 441 aa12.48□□□□□ -0.41
SPC25-201ENST00000282074 IMPG2Q9BZV3 1241 aa12.48□□□□□ -0.41
SPC25-201ENST00000282074 EBF2Q9HAK2 575 aa12.48□□□□□ -0.41
SPC25-201ENST00000282074 CPNE5Q9HCH3 593 aa12.48□□□□□ -0.41
SPC25-201ENST00000282074 FZD4Q9ULV1 537 aa12.48□□□□□ -0.41
SPC25-201ENST00000282074 MORC2Q9Y6X9 1032 aaPredicted RBP12.48□□□□□ -0.41
SPC25-201ENST00000282074 ARID1BQ8NFD5 2236 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms