RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 MTFMTQ96DP5 389 aaKnown RBP4.87□□□□□ -1.63
CD44-202ENST00000278385 NUDT11Q96G61 164 aa4.87□□□□□ -1.63
CD44-202ENST00000278385 SUCLG2Q96I99 432 aa4.87□□□□□ -1.63
CD44-202ENST00000278385 ZNF830Q96NB3 372 aaPredicted RBP4.87□□□□□ -1.63
CD44-202ENST00000278385 FAM210AQ96ND0 272 aa4.87□□□□□ -1.63
CD44-202ENST00000278385 TWSG1Q9GZX9 223 aa4.87□□□□□ -1.63
CD44-202ENST00000278385 ADAM7Q9H2U9 754 aa4.87□□□□□ -1.63
CD44-202ENST00000278385 MIS18AQ9NYP9 233 aa4.87□□□□□ -1.63
CD44-202ENST00000278385 AIPL1Q9NZN9 384 aa4.87□□□□□ -1.63
CD44-202ENST00000278385 C6orf203Q9P0P8 240 aaPredicted RBP4.87□□□□□ -1.63
CD44-202ENST00000278385 Q9UFV3 132 aa4.87□□□□□ -1.63
CD44-202ENST00000278385 TSPYL4Q9UJ04 414 aa4.87□□□□□ -1.63
CD44-202ENST00000278385 ADAM29Q9UKF5 820 aa4.87□□□□□ -1.63
CD44-202ENST00000278385 ITGB4P16144 1822 aa4.87□□□□□ -1.63
CD44-202ENST00000278385 KCPQ6ZWJ8 1503 aa4.87□□□□□ -1.63
CD44-202ENST00000278385 COL24A1Q17RW2 1714 aa4.86□□□□□ -1.63
CD44-202ENST00000278385 CLCA1A8K7I4 914 aa4.86□□□□□ -1.63
CD44-202ENST00000278385 A8MXE2 369 aa4.86□□□□□ -1.63
CD44-202ENST00000278385 ERVV-1B6SEH8 477 aa4.86□□□□□ -1.63
CD44-202ENST00000278385 KINO60870 393 aaKnown RBP4.86□□□□□ -1.63
CD44-202ENST00000278385 CSPG5O95196 566 aa4.86□□□□□ -1.63
CD44-202ENST00000278385 IL18BPO95998 194 aa4.86□□□□□ -1.63
CD44-202ENST00000278385 CLEC3BP05452 202 aa4.86□□□□□ -1.63
CD44-202ENST00000278385 ANXA2P07355 339 aaKnown RBP4.86□□□□□ -1.63
CD44-202ENST00000278385 HEXBP07686 556 aa4.86□□□□□ -1.63
CD44-202ENST00000278385 CELA3BP08861 270 aa4.86□□□□□ -1.63
CD44-202ENST00000278385 DLDP09622 509 aaKnown RBP4.86□□□□□ -1.63
CD44-202ENST00000278385 NPR1P16066 1061 aa4.86□□□□□ -1.63
CD44-202ENST00000278385 RXRAP19793 462 aa4.86□□□□□ -1.63
CD44-202ENST00000278385 CHRNA5P30532 468 aa4.86□□□□□ -1.63
CD44-202ENST00000278385 TLX1P31314 330 aaPredicted RBP4.86□□□□□ -1.63
CD44-202ENST00000278385 PSMC4P43686 418 aa4.86□□□□□ -1.63
CD44-202ENST00000278385 AARSP49588 968 aaKnown RBP eCLIP4.86□□□□□ -1.63
CD44-202ENST00000278385 MXI1P50539 228 aa4.86□□□□□ -1.63
CD44-202ENST00000278385 ARFIP1P53367 373 aa4.86□□□□□ -1.63
CD44-202ENST00000278385 SLC12A3P55017 1021 aa4.86□□□□□ -1.63
CD44-202ENST00000278385 PPP2CBP62714 309 aa4.86□□□□□ -1.63
CD44-202ENST00000278385 PPP2CAP67775 309 aa4.86□□□□□ -1.63
CD44-202ENST00000278385 FSTL1Q12841 308 aa4.86□□□□□ -1.63
CD44-202ENST00000278385 COASYQ13057 564 aa4.86□□□□□ -1.63
CD44-202ENST00000278385 IL10RAQ13651 578 aa4.86□□□□□ -1.63
CD44-202ENST00000278385 TBCEQ15813 527 aaPredicted RBP4.86□□□□□ -1.63
CD44-202ENST00000278385 TCP11X2Q5H9J9 407 aa4.86□□□□□ -1.63
CD44-202ENST00000278385 CATSPEREQ5SY80 951 aa4.86□□□□□ -1.63
CD44-202ENST00000278385 C10orf76Q5T2E6 689 aa4.86□□□□□ -1.63
CD44-202ENST00000278385 PRR5LQ6MZQ0 368 aa4.86□□□□□ -1.63
CD44-202ENST00000278385 CCDC62Q6P9F0 684 aa4.86□□□□□ -1.63
CD44-202ENST00000278385 KLHL24Q6TFL4 600 aa4.86□□□□□ -1.63
CD44-202ENST00000278385 PLEKHM3Q6ZWE6 761 aa4.86□□□□□ -1.63
CD44-202ENST00000278385 KRTAP1-3Q8IUG1 177 aa4.86□□□□□ -1.63
CD44-202ENST00000278385 CCDC117Q8IWD4 279 aaPredicted RBP4.86□□□□□ -1.63
CD44-202ENST00000278385 DIS3L2Q8IYB7 885 aaKnown RBP4.86□□□□□ -1.63
CD44-202ENST00000278385 C10orf53Q8N6V4 93 aa4.86□□□□□ -1.63
CD44-202ENST00000278385 DENND6BQ8NEG7 585 aa4.86□□□□□ -1.63
CD44-202ENST00000278385 CHST13Q8NET6 341 aa4.86□□□□□ -1.63
CD44-202ENST00000278385 ANKRD20A12PQ8NF67 263 aa4.86□□□□□ -1.63
CD44-202ENST00000278385 SMCR8Q8TEV9 937 aaPredicted RBP4.86□□□□□ -1.63
CD44-202ENST00000278385 TSPEARQ8WU66 669 aa4.86□□□□□ -1.63
CD44-202ENST00000278385 ANKRD49Q8WVL7 239 aa4.86□□□□□ -1.63
CD44-202ENST00000278385 CTNNBL1Q8WYA6 563 aaPredicted RBP4.86□□□□□ -1.63
CD44-202ENST00000278385 KAT5Q92993 513 aa4.86□□□□□ -1.63
CD44-202ENST00000278385 CUL5Q93034 780 aa4.86□□□□□ -1.63
CD44-202ENST00000278385 ATP6V0A1Q93050 837 aa4.86□□□□□ -1.63
CD44-202ENST00000278385 HDAC10Q969S8 669 aa4.86□□□□□ -1.63
CD44-202ENST00000278385 NMD3Q96D46 503 aaKnown RBP4.86□□□□□ -1.63
CD44-202ENST00000278385 SLC35A4Q96G79 324 aa4.86□□□□□ -1.63
CD44-202ENST00000278385 AJUBAQ96IF1 538 aa4.86□□□□□ -1.63
CD44-202ENST00000278385 MAML3Q96JK9 1138 aa4.86□□□□□ -1.63
CD44-202ENST00000278385 AK8Q96MA6 479 aa4.86□□□□□ -1.63
CD44-202ENST00000278385 CRACR2AQ9BSW2 395 aa4.86□□□□□ -1.63
CD44-202ENST00000278385 BDH2Q9BUT1 245 aa4.86□□□□□ -1.63
CD44-202ENST00000278385 ACE2Q9BYF1 805 aaPredicted RBP4.86□□□□□ -1.63
CD44-202ENST00000278385 C1orf21Q9H246 121 aa4.86□□□□□ -1.63
CD44-202ENST00000278385 PDCL3Q9H2J4 239 aa4.86□□□□□ -1.63
CD44-202ENST00000278385 PABPC3Q9H361 631 aaKnown RBP4.86□□□□□ -1.63
CD44-202ENST00000278385 NDST4Q9H3R1 872 aa4.86□□□□□ -1.63
CD44-202ENST00000278385 ABHD16BQ9H3Z7 469 aa4.86□□□□□ -1.63
CD44-202ENST00000278385 VPS37BQ9H9H4 285 aa4.86□□□□□ -1.63
CD44-202ENST00000278385 BTBD7Q9P203 1132 aa4.86□□□□□ -1.63
CD44-202ENST00000278385 C5AR2Q9P296 337 aa4.86□□□□□ -1.63
CD44-202ENST00000278385 SAE1Q9UBE0 346 aaPredicted RBP4.86□□□□□ -1.63
CD44-202ENST00000278385 PI4KBQ9UBF8 816 aa4.86□□□□□ -1.63
CD44-202ENST00000278385 AFF4Q9UHB7 1163 aaKnown RBP4.86□□□□□ -1.63
CD44-202ENST00000278385 WASF3Q9UPY6 502 aa4.86□□□□□ -1.63
CD44-202ENST00000278385 CCL27Q9Y4X3 112 aa4.86□□□□□ -1.63
CD44-202ENST00000278385 TRIM17Q9Y577 477 aa4.86□□□□□ -1.63
CD44-202ENST00000278385 SQORQ9Y6N5 450 aa4.86□□□□□ -1.63
CD44-202ENST00000278385 AP1M2Q9Y6Q5 423 aa4.86□□□□□ -1.63
CD44-202ENST00000278385 PXDNLA1KZ92 1463 aa4.86□□□□□ -1.63
CD44-202ENST00000278385 A0A0U1RQK1 487 aa4.85□□□□□ -1.63
CD44-202ENST00000278385 ZNF320A2RRD8 509 aa4.85□□□□□ -1.63
CD44-202ENST00000278385 CCDC151A5D8V7 595 aa4.85□□□□□ -1.63
CD44-202ENST00000278385 H3BUI4 141 aa4.85□□□□□ -1.63
CD44-202ENST00000278385 K7EPI3 171 aa4.85□□□□□ -1.63
CD44-202ENST00000278385 K7ESM1 405 aa4.85□□□□□ -1.63
CD44-202ENST00000278385 AP3B1O00203 1094 aa4.85□□□□□ -1.63
CD44-202ENST00000278385 TAF4O00268 1085 aa4.85□□□□□ -1.63
CD44-202ENST00000278385 CACNB4O00305 520 aaPredicted RBP4.85□□□□□ -1.63
CD44-202ENST00000278385 ASNA1O43681 348 aa4.85□□□□□ -1.63
CD44-202ENST00000278385 KLHL18O94889 574 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms