RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 PIM2Q9P1W9 311 aa8.9□□□□□ -0.98
SCUBE3-201ENST00000274938 TRPC4Q9UBN4 977 aa8.9□□□□□ -0.98
SCUBE3-201ENST00000274938 ZNF609O15014 1411 aa8.9□□□□□ -0.99
SCUBE3-201ENST00000274938 COL15A1P39059 1388 aa8.9□□□□□ -0.99
SCUBE3-201ENST00000274938 MGRN1O60291 552 aa8.9□□□□□ -0.99
SCUBE3-201ENST00000274938 KPNA1P52294 538 aaPredicted RBP8.9□□□□□ -0.99
SCUBE3-201ENST00000274938 PDK3Q15120 406 aa8.9□□□□□ -0.99
SCUBE3-201ENST00000274938 FAM187BQ17R55 369 aa8.9□□□□□ -0.99
SCUBE3-201ENST00000274938 C16orf86Q6ZW13 317 aa8.9□□□□□ -0.99
SCUBE3-201ENST00000274938 CBWD2Q8IUF1 395 aa8.9□□□□□ -0.99
SCUBE3-201ENST00000274938 SP8Q8IXZ3 490 aa8.9□□□□□ -0.99
SCUBE3-201ENST00000274938 PROX1Q92786 737 aa8.9□□□□□ -0.99
SCUBE3-201ENST00000274938 ACSF2Q96CM8 615 aaPredicted RBP8.9□□□□□ -0.99
SCUBE3-201ENST00000274938 PI4K2AQ9BTU6 479 aa8.9□□□□□ -0.99
SCUBE3-201ENST00000274938 A2ML1A8K2U0 1454 aa8.9□□□□□ -0.99
SCUBE3-201ENST00000274938 H7C4K7 107 aa8.89□□□□□ -0.99
SCUBE3-201ENST00000274938 RGS14O43566 566 aa8.89□□□□□ -0.99
SCUBE3-201ENST00000274938 WFS1O76024 890 aa8.89□□□□□ -0.99
SCUBE3-201ENST00000274938 NDUFB10O96000 172 aa8.89□□□□□ -0.99
SCUBE3-201ENST00000274938 ASS1P00966 412 aaKnown RBP8.89□□□□□ -0.99
SCUBE3-201ENST00000274938 ATP6V1C1P21283 382 aa8.89□□□□□ -0.99
SCUBE3-201ENST00000274938 MYL6P60660 151 aa8.89□□□□□ -0.99
SCUBE3-201ENST00000274938 FOXO4P98177 505 aa8.89□□□□□ -0.99
SCUBE3-201ENST00000274938 CDKAL1Q5VV42 579 aa8.89□□□□□ -0.99
SCUBE3-201ENST00000274938 AAGABQ6PD74 315 aa8.89□□□□□ -0.99
SCUBE3-201ENST00000274938 USP49Q70CQ1 688 aa8.89□□□□□ -0.99
SCUBE3-201ENST00000274938 POC5Q8NA72 575 aa8.89□□□□□ -0.99
SCUBE3-201ENST00000274938 FNDC5Q8NAU1 212 aa8.89□□□□□ -0.99
SCUBE3-201ENST00000274938 USP18Q9UMW8 372 aa8.89□□□□□ -0.99
SCUBE3-201ENST00000274938 HACD1B0YJ81 288 aa8.89□□□□□ -0.99
SCUBE3-201ENST00000274938 SLC25A27O95847 323 aa8.89□□□□□ -0.99
SCUBE3-201ENST00000274938 ITGB3P05106 788 aa8.89□□□□□ -0.99
SCUBE3-201ENST00000274938 LBPP18428 481 aa8.89□□□□□ -0.99
SCUBE3-201ENST00000274938 HPCAL1P37235 193 aa8.89□□□□□ -0.99
SCUBE3-201ENST00000274938 SAMD3Q8N6K7 520 aa8.89□□□□□ -0.99
SCUBE3-201ENST00000274938 COLGALT1Q8NBJ5 622 aa8.89□□□□□ -0.99
SCUBE3-201ENST00000274938 CHST13Q8NET6 341 aa8.89□□□□□ -0.99
SCUBE3-201ENST00000274938 BORCS5Q969J3 196 aa8.89□□□□□ -0.99
SCUBE3-201ENST00000274938 PRDM5Q9NQX1 630 aaPredicted RBP8.89□□□□□ -0.99
SCUBE3-201ENST00000274938 ATXN10Q9UBB4 475 aa8.89□□□□□ -0.99
SCUBE3-201ENST00000274938 GSAPA4D1B5 854 aa8.89□□□□□ -0.99
SCUBE3-201ENST00000274938 PTGES3LE9PB15 166 aa8.89□□□□□ -0.99
SCUBE3-201ENST00000274938 HAT1O14929 419 aa8.89□□□□□ -0.99
SCUBE3-201ENST00000274938 ADCY6O43306 1168 aa8.89□□□□□ -0.99
SCUBE3-201ENST00000274938 AP1G2O75843 785 aa8.89□□□□□ -0.99
SCUBE3-201ENST00000274938 RPL14P50914 215 aaKnown RBP8.89□□□□□ -0.99
SCUBE3-201ENST00000274938 RFX4Q33E94 735 aa8.89□□□□□ -0.99
SCUBE3-201ENST00000274938 CELF1Q92879 486 aaKnown RBP8.89□□□□□ -0.99
SCUBE3-201ENST00000274938 PLEKHG4BQ96PX9 1271 aa8.89□□□□□ -0.99
SCUBE3-201ENST00000274938 TMEM121Q9BTD3 319 aa8.89□□□□□ -0.99
SCUBE3-201ENST00000274938 SLC25A13Q9UJS0 675 aa8.89□□□□□ -0.99
SCUBE3-201ENST00000274938 AK5Q9Y6K8 562 aa8.89□□□□□ -0.99
SCUBE3-201ENST00000274938 DSG3P32926 999 aa8.89□□□□□ -0.99
SCUBE3-201ENST00000274938 ANTXR2P58335 489 aa8.89□□□□□ -0.99
SCUBE3-201ENST00000274938 PTSQ03393 145 aa8.89□□□□□ -0.99
SCUBE3-201ENST00000274938 BNIP2Q12982 314 aa8.89□□□□□ -0.99
SCUBE3-201ENST00000274938 TTI2Q6NXR4 508 aa8.89□□□□□ -0.99
SCUBE3-201ENST00000274938 DHDDSQ86SQ9 333 aa8.89□□□□□ -0.99
SCUBE3-201ENST00000274938 SYNE4Q8N205 404 aa8.89□□□□□ -0.99
SCUBE3-201ENST00000274938 SPIRE2Q8WWL2 714 aa8.89□□□□□ -0.99
SCUBE3-201ENST00000274938 TMEM237Q96Q45 408 aa8.89□□□□□ -0.99
SCUBE3-201ENST00000274938 GORASP1Q9BQQ3 440 aa8.89□□□□□ -0.99
SCUBE3-201ENST00000274938 ENTPD7Q9NQZ7 604 aa8.89□□□□□ -0.99
SCUBE3-201ENST00000274938 VPS51Q9UID3 782 aa8.89□□□□□ -0.99
SCUBE3-201ENST00000274938 C3orf18Q9UK00 162 aa8.89□□□□□ -0.99
SCUBE3-201ENST00000274938 KCNH4Q9UQ05 1017 aa8.89□□□□□ -0.99
SCUBE3-201ENST00000274938 SSNA1O43805 119 aa8.89□□□□□ -0.99
SCUBE3-201ENST00000274938 UNC5CO95185 931 aa8.89□□□□□ -0.99
SCUBE3-201ENST00000274938 SRP54P61011 504 aaKnown RBP8.89□□□□□ -0.99
SCUBE3-201ENST00000274938 GRB10Q13322 594 aa8.89□□□□□ -0.99
SCUBE3-201ENST00000274938 TAF5Q15542 800 aa8.89□□□□□ -0.99
SCUBE3-201ENST00000274938 EZH2Q15910 746 aaKnown RBP8.89□□□□□ -0.99
SCUBE3-201ENST00000274938 BICRALQ6AI39 1079 aa8.89□□□□□ -0.99
SCUBE3-201ENST00000274938 MSL3Q8N5Y2 521 aaKnown RBP8.89□□□□□ -0.99
SCUBE3-201ENST00000274938 UCMAQ8WVF2 138 aa8.89□□□□□ -0.99
SCUBE3-201ENST00000274938 VCPIP1Q96JH7 1222 aa8.89□□□□□ -0.99
SCUBE3-201ENST00000274938 S100A13Q99584 98 aa8.89□□□□□ -0.99
SCUBE3-201ENST00000274938 ABT1Q9ULW3 272 aaKnown RBP8.89□□□□□ -0.99
SCUBE3-201ENST00000274938 PRKAR1AP10644 381 aa8.89□□□□□ -0.99
SCUBE3-201ENST00000274938 ELK3P41970 407 aa8.89□□□□□ -0.99
SCUBE3-201ENST00000274938 ZNF135P52742 658 aaPredicted RBP8.89□□□□□ -0.99
SCUBE3-201ENST00000274938 MTTPP55157 894 aa8.89□□□□□ -0.99
SCUBE3-201ENST00000274938 FGD3Q5JSP0 725 aa8.89□□□□□ -0.99
SCUBE3-201ENST00000274938 ZDHHC17Q8IUH5 632 aa8.89□□□□□ -0.99
SCUBE3-201ENST00000274938 EMC1Q8N766 993 aa8.89□□□□□ -0.99
SCUBE3-201ENST00000274938 POMGNT2Q8NAT1 580 aa8.89□□□□□ -0.99
SCUBE3-201ENST00000274938 PTCD3Q96EY7 689 aaKnown RBP8.89□□□□□ -0.99
SCUBE3-201ENST00000274938 DGCR6LQ9BY27 220 aa8.89□□□□□ -0.99
SCUBE3-201ENST00000274938 MID1IP1Q9NPA3 183 aa8.89□□□□□ -0.99
SCUBE3-201ENST00000274938 RPS6KA6Q9UK32 745 aa8.89□□□□□ -0.99
SCUBE3-201ENST00000274938 TFR2Q9UP52 801 aa8.89□□□□□ -0.99
SCUBE3-201ENST00000274938 DMTF1Q9Y222 760 aa8.89□□□□□ -0.99
SCUBE3-201ENST00000274938 METP08581 1390 aa8.89□□□□□ -0.99
SCUBE3-201ENST00000274938 CDH3P22223 829 aa8.88□□□□□ -0.99
SCUBE3-201ENST00000274938 DLG4P78352 724 aa8.88□□□□□ -0.99
SCUBE3-201ENST00000274938 SQLEQ14534 574 aa8.88□□□□□ -0.99
SCUBE3-201ENST00000274938 TMEM132BQ14DG7 1078 aa8.88□□□□□ -0.99
SCUBE3-201ENST00000274938 KCNMB4Q86W47 210 aa8.88□□□□□ -0.99
SCUBE3-201ENST00000274938 BHLHE22Q8NFJ8 381 aaPredicted RBP8.88□□□□□ -0.99
SCUBE3-201ENST00000274938 TATDN2Q93075 761 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms