RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 KIF26AQ9ULI4 1882 aaPredicted RBP10.34□□□□□ -0.75
LRTM1-201ENST00000273286 SLC8A2Q9UPR5 921 aa10.34□□□□□ -0.75
LRTM1-201ENST00000273286 PCDHGA5Q9Y5G8 931 aa10.34□□□□□ -0.75
LRTM1-201ENST00000273286 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.34□□□□□ -0.75
LRTM1-201ENST00000273286 MORC2Q9Y6X9 1032 aaPredicted RBP10.34□□□□□ -0.75
LRTM1-201ENST00000273286 RALGAPA1Q6GYQ0 2036 aa10.34□□□□□ -0.75
LRTM1-201ENST00000273286 SPAG17Q6Q759 2223 aa10.34□□□□□ -0.75
LRTM1-201ENST00000273286 NRDCO43847 1150 aa10.33□□□□□ -0.76
LRTM1-201ENST00000273286 NUAK1O60285 661 aa10.33□□□□□ -0.76
LRTM1-201ENST00000273286 RPP40O75818 363 aaKnown RBP10.33□□□□□ -0.76
LRTM1-201ENST00000273286 ITGB3P05106 788 aa10.33□□□□□ -0.76
LRTM1-201ENST00000273286 CCDC192P0DO97 292 aa10.33□□□□□ -0.76
LRTM1-201ENST00000273286 HMGA1P17096 107 aaKnown RBP10.33□□□□□ -0.76
LRTM1-201ENST00000273286 ADSSP30520 456 aa10.33□□□□□ -0.76
LRTM1-201ENST00000273286 TFAMQ00059 246 aaKnown RBP10.33□□□□□ -0.76
LRTM1-201ENST00000273286 MYO1EQ12965 1108 aa10.33□□□□□ -0.76
LRTM1-201ENST00000273286 SURF1Q15526 300 aa10.33□□□□□ -0.76
LRTM1-201ENST00000273286 RRAGBQ5VZM2 374 aa10.33□□□□□ -0.76
LRTM1-201ENST00000273286 HEATR6Q6AI08 1181 aaKnown RBP10.33□□□□□ -0.76
LRTM1-201ENST00000273286 IL31Q6EBC2 164 aa10.33□□□□□ -0.76
LRTM1-201ENST00000273286 C4orf50Q6ZRC1 276 aa10.33□□□□□ -0.76
LRTM1-201ENST00000273286 SYCP3Q8IZU3 236 aa10.33□□□□□ -0.76
LRTM1-201ENST00000273286 KIAA1958Q8N8K9 716 aa10.33□□□□□ -0.76
LRTM1-201ENST00000273286 MAB21L3Q8N8X9 362 aa10.33□□□□□ -0.76
LRTM1-201ENST00000273286 LRRC15Q8TF66 581 aa10.33□□□□□ -0.76
LRTM1-201ENST00000273286 USP13Q92995 863 aaPredicted RBP10.33□□□□□ -0.76
LRTM1-201ENST00000273286 ATP2A3Q93084 1043 aa10.33□□□□□ -0.76
LRTM1-201ENST00000273286 FAM213AQ9BRX8 229 aa10.33□□□□□ -0.76
LRTM1-201ENST00000273286 LRRC27Q9C0I9 530 aa10.33□□□□□ -0.76
LRTM1-201ENST00000273286 GDAP2Q9NXN4 497 aa10.33□□□□□ -0.76
LRTM1-201ENST00000273286 DDX43Q9NXZ2 648 aaKnown RBP10.33□□□□□ -0.76
LRTM1-201ENST00000273286 RBAKQ9NYW8 714 aaPredicted RBP10.33□□□□□ -0.76
LRTM1-201ENST00000273286 SRPRBQ9Y5M8 271 aaKnown RBP10.33□□□□□ -0.76
LRTM1-201ENST00000273286 CNOT1A5YKK6 2376 aaKnown RBP10.33□□□□□ -0.76
LRTM1-201ENST00000273286 NOL4O94818 638 aa10.33□□□□□ -0.76
LRTM1-201ENST00000273286 GCNT3O95395 438 aa10.33□□□□□ -0.76
LRTM1-201ENST00000273286 TMEM191BP0C7N4 346 aa10.33□□□□□ -0.76
LRTM1-201ENST00000273286 ZNF806P0C7X5 589 aa10.33□□□□□ -0.76
LRTM1-201ENST00000273286 TCF3P15923 654 aa10.33□□□□□ -0.76
LRTM1-201ENST00000273286 RBP5P82980 135 aa10.33□□□□□ -0.76
LRTM1-201ENST00000273286 GRIN1Q05586 938 aa10.33□□□□□ -0.76
LRTM1-201ENST00000273286 AASDHQ4L235 1098 aaPredicted RBP10.33□□□□□ -0.76
LRTM1-201ENST00000273286 VSTM1Q6UX27 236 aa10.33□□□□□ -0.76
LRTM1-201ENST00000273286 TMEM150AQ86TG1 271 aa10.33□□□□□ -0.76
LRTM1-201ENST00000273286 C11orf74Q86VG3 221 aa10.33□□□□□ -0.76
LRTM1-201ENST00000273286 SPATA2LQ8IUW3 424 aaPredicted RBP10.33□□□□□ -0.76
LRTM1-201ENST00000273286 PDCL2Q8N4E4 241 aa10.33□□□□□ -0.76
LRTM1-201ENST00000273286 TTC8Q8TAM2 541 aa10.33□□□□□ -0.76
LRTM1-201ENST00000273286 ANKRD36BP1Q96IX9 119 aa10.33□□□□□ -0.76
LRTM1-201ENST00000273286 EPSTI1Q96J88 318 aa10.33□□□□□ -0.76
LRTM1-201ENST00000273286 ZC3H10Q96K80 434 aaKnown RBP10.33□□□□□ -0.76
LRTM1-201ENST00000273286 P2RY13Q9BPV8 354 aa10.33□□□□□ -0.76
LRTM1-201ENST00000273286 PI4K2AQ9BTU6 479 aa10.33□□□□□ -0.76
LRTM1-201ENST00000273286 KIAA1586Q9HCI6 787 aa10.33□□□□□ -0.76
LRTM1-201ENST00000273286 GFOD1Q9NXC2 390 aa10.33□□□□□ -0.76
LRTM1-201ENST00000273286 MAGED2Q9UNF1 606 aaPredicted RBP10.33□□□□□ -0.76
LRTM1-201ENST00000273286 AGAP1Q9UPQ3 857 aa10.33□□□□□ -0.76
LRTM1-201ENST00000273286 DENND4CQ5VZ89 1909 aa10.32□□□□□ -0.76
LRTM1-201ENST00000273286 TRAV19A0A0A6YYK7 116 aa10.32□□□□□ -0.76
LRTM1-201ENST00000273286 TEX51A0A1B0GUA7 166 aa10.32□□□□□ -0.76
LRTM1-201ENST00000273286 VPS37CA5D8V6 355 aaPredicted RBP10.32□□□□□ -0.76
LRTM1-201ENST00000273286 OR14I1A6ND48 311 aa10.32□□□□□ -0.76
LRTM1-201ENST00000273286 TISP43B9A030 160 aa10.32□□□□□ -0.76
LRTM1-201ENST00000273286 GABRDO14764 452 aa10.32□□□□□ -0.76
LRTM1-201ENST00000273286 EXTL3O43909 919 aa10.32□□□□□ -0.76
LRTM1-201ENST00000273286 EPN2O95208 641 aa10.32□□□□□ -0.76
LRTM1-201ENST00000273286 IDEP14735 1019 aa10.32□□□□□ -0.76
LRTM1-201ENST00000273286 MAGEA11P43364 429 aa10.32□□□□□ -0.76
LRTM1-201ENST00000273286 PPP3CCP48454 512 aa10.32□□□□□ -0.76
LRTM1-201ENST00000273286 IFNAR2P48551 515 aa10.32□□□□□ -0.76
LRTM1-201ENST00000273286 DMWDQ09019 674 aa10.32□□□□□ -0.76
LRTM1-201ENST00000273286 KCNB1Q14721 858 aa10.32□□□□□ -0.76
LRTM1-201ENST00000273286 MTF1Q14872 753 aa10.32□□□□□ -0.76
LRTM1-201ENST00000273286 ELF2Q15723 593 aa10.32□□□□□ -0.76
LRTM1-201ENST00000273286 TXNDC8Q6A555 127 aa10.32□□□□□ -0.76
LRTM1-201ENST00000273286 FSTL4Q6MZW2 842 aa10.32□□□□□ -0.76
LRTM1-201ENST00000273286 SYT13Q7L8C5 426 aa10.32□□□□□ -0.76
LRTM1-201ENST00000273286 ADGRF2Q8IZF7 708 aa10.32□□□□□ -0.76
LRTM1-201ENST00000273286 GPD1LQ8N335 351 aa10.32□□□□□ -0.76
LRTM1-201ENST00000273286 CSGALNACT2Q8N6G5 542 aa10.32□□□□□ -0.76
LRTM1-201ENST00000273286 OSCP1Q8WVF1 389 aa10.32□□□□□ -0.76
LRTM1-201ENST00000273286 DNAJC19Q96DA6 116 aa10.32□□□□□ -0.76
LRTM1-201ENST00000273286 EBF3Q9H4W6 596 aa10.32□□□□□ -0.76
LRTM1-201ENST00000273286 HPS4Q9NQG7 708 aa10.32□□□□□ -0.76
LRTM1-201ENST00000273286 L1RE1Q9UN81 338 aa10.32□□□□□ -0.76
LRTM1-201ENST00000273286 CCL26Q9Y258 94 aa10.32□□□□□ -0.76
LRTM1-201ENST00000273286 ZNF638Q14966 1978 aaKnown RBP10.32□□□□□ -0.76
LRTM1-201ENST00000273286 GREB1Q4ZG55 1949 aa10.31□□□□□ -0.76
LRTM1-201ENST00000273286 FRMD3A2A2Y4 597 aa10.31□□□□□ -0.76
LRTM1-201ENST00000273286 MYMKA6NI61 221 aa10.31□□□□□ -0.76
LRTM1-201ENST00000273286 NFATC1O95644 943 aa10.31□□□□□ -0.76
LRTM1-201ENST00000273286 CKMP06732 381 aa10.31□□□□□ -0.76
LRTM1-201ENST00000273286 KRT19P08727 400 aa10.31□□□□□ -0.76
LRTM1-201ENST00000273286 FAM163BP0C2L3 166 aa10.31□□□□□ -0.76
LRTM1-201ENST00000273286 GJA4P35212 333 aa10.31□□□□□ -0.76
LRTM1-201ENST00000273286 STAT6P42226 847 aa10.31□□□□□ -0.76
LRTM1-201ENST00000273286 SRSF5Q13243 272 aaKnown RBP10.31□□□□□ -0.76
LRTM1-201ENST00000273286 TMCO4Q5TGY1 634 aa10.31□□□□□ -0.76
LRTM1-201ENST00000273286 CCDC65Q8IXS2 484 aa10.31□□□□□ -0.76
LRTM1-201ENST00000273286 CD101Q93033 1021 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms