RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 FERMT1Q9BQL6 677 aa16.15■□□□□ 0.18
CTDSP1-201ENST00000273062 TMEM79Q9BSE2 394 aa16.15■□□□□ 0.18
CTDSP1-201ENST00000273062 SLC13A1Q9BZW2 595 aa16.15■□□□□ 0.18
CTDSP1-201ENST00000273062 PCDH12Q9NPG4 1184 aa16.15■□□□□ 0.18
CTDSP1-201ENST00000273062 DNMT3BQ9UBC3 853 aaKnown RBP16.15■□□□□ 0.18
CTDSP1-201ENST00000273062 CPQQ9Y646 472 aa16.15■□□□□ 0.18
CTDSP1-201ENST00000273062 CROCCQ5TZA2 2017 aa16.14■□□□□ 0.17
CTDSP1-201ENST00000273062 TIMM44O43615 452 aa16.14■□□□□ 0.17
CTDSP1-201ENST00000273062 THOP1P52888 689 aa16.14■□□□□ 0.17
CTDSP1-201ENST00000273062 TAS2R40P59535 323 aa16.14■□□□□ 0.17
CTDSP1-201ENST00000273062 MOGQ16653 247 aa16.14■□□□□ 0.17
CTDSP1-201ENST00000273062 BMT2Q1RMZ1 405 aa16.14■□□□□ 0.17
CTDSP1-201ENST00000273062 LSM12Q3MHD2 195 aaKnown RBP16.14■□□□□ 0.17
CTDSP1-201ENST00000273062 ZBED5Q49AG3 693 aa16.14■□□□□ 0.17
CTDSP1-201ENST00000273062 ZC3H7AQ8IWR0 971 aaKnown RBP16.14■□□□□ 0.17
CTDSP1-201ENST00000273062 LILRB4Q8NHJ6 448 aa16.14■□□□□ 0.17
CTDSP1-201ENST00000273062 SYTL5Q8TDW5 730 aaPredicted RBP16.14■□□□□ 0.17
CTDSP1-201ENST00000273062 BHMTQ93088 406 aa16.14■□□□□ 0.17
CTDSP1-201ENST00000273062 CCDC138Q96M89 665 aa16.14■□□□□ 0.17
CTDSP1-201ENST00000273062 RNF38Q9H0F5 515 aa16.14■□□□□ 0.17
CTDSP1-201ENST00000273062 RPAP3Q9H6T3 665 aaPredicted RBP16.14■□□□□ 0.17
CTDSP1-201ENST00000273062 PARVGQ9HBI0 331 aa16.14■□□□□ 0.17
CTDSP1-201ENST00000273062 MRGBPQ9NV56 204 aa16.14■□□□□ 0.17
CTDSP1-201ENST00000273062 ITGA11Q9UKX5 1188 aa16.14■□□□□ 0.17
CTDSP1-201ENST00000273062 DHX15O43143 795 aaKnown RBP16.14■□□□□ 0.17
CTDSP1-201ENST00000273062 RNASEH2AO75792 299 aaKnown RBP16.14■□□□□ 0.17
CTDSP1-201ENST00000273062 CSPG5O95196 566 aa16.14■□□□□ 0.17
CTDSP1-201ENST00000273062 UBL4AP11441 157 aa16.14■□□□□ 0.17
CTDSP1-201ENST00000273062 RPS6P62753 249 aaKnown RBP16.14■□□□□ 0.17
CTDSP1-201ENST00000273062 MS4A2Q01362 244 aa16.14■□□□□ 0.17
CTDSP1-201ENST00000273062 CARTPTQ16568 116 aa16.14■□□□□ 0.17
CTDSP1-201ENST00000273062 ATP13A4Q4VNC1 1196 aa16.14■□□□□ 0.17
CTDSP1-201ENST00000273062 POLNQ7Z5Q5 900 aa16.14■□□□□ 0.17
CTDSP1-201ENST00000273062 IGDCC3Q8IVU1 814 aa16.14■□□□□ 0.17
CTDSP1-201ENST00000273062 KLHL32Q96NJ5 620 aa16.14■□□□□ 0.17
CTDSP1-201ENST00000273062 ALPK1Q96QP1 1244 aa16.14■□□□□ 0.17
CTDSP1-201ENST00000273062 UNKQ9C0B0 810 aaKnown RBP16.14■□□□□ 0.17
CTDSP1-201ENST00000273062 EHMT1Q9H9B1 1298 aa16.14■□□□□ 0.17
CTDSP1-201ENST00000273062 CXorf21Q9HAI6 301 aa16.14■□□□□ 0.17
CTDSP1-201ENST00000273062 SLC38A10Q9HBR0 1119 aa16.14■□□□□ 0.17
CTDSP1-201ENST00000273062 TCRBV7S3A2A0A539 114 aa16.13■□□□□ 0.17
CTDSP1-201ENST00000273062 TISP43B9A030 160 aa16.13■□□□□ 0.17
CTDSP1-201ENST00000273062 COPEO14579 308 aa16.13■□□□□ 0.17
CTDSP1-201ENST00000273062 DYNC1LI2O43237 492 aaPredicted RBP16.13■□□□□ 0.17
CTDSP1-201ENST00000273062 LIASO43766 372 aa16.13■□□□□ 0.17
CTDSP1-201ENST00000273062 TXNL4AP83876 142 aaKnown RBP16.13■□□□□ 0.17
CTDSP1-201ENST00000273062 GALNT2Q10471 571 aa16.13■□□□□ 0.17
CTDSP1-201ENST00000273062 TRAF2Q12933 501 aa16.13■□□□□ 0.17
CTDSP1-201ENST00000273062 PMS2P3Q13401 168 aa16.13■□□□□ 0.17
CTDSP1-201ENST00000273062 MORF4L2Q15014 288 aa16.13■□□□□ 0.17
CTDSP1-201ENST00000273062 PGS1Q32NB8 556 aa16.13■□□□□ 0.17
CTDSP1-201ENST00000273062 EPC2Q52LR7 807 aa16.13■□□□□ 0.17
CTDSP1-201ENST00000273062 KRT80Q6KB66 452 aa16.13■□□□□ 0.17
CTDSP1-201ENST00000273062 MMAAQ8IVH4 418 aaKnown RBP16.13■□□□□ 0.17
CTDSP1-201ENST00000273062 FAM20CQ8IXL6 584 aa16.13■□□□□ 0.17
CTDSP1-201ENST00000273062 DAW1Q8N136 415 aa16.13■□□□□ 0.17
CTDSP1-201ENST00000273062 TMEM102Q8N9M5 508 aaPredicted RBP16.13■□□□□ 0.17
CTDSP1-201ENST00000273062 FEM1CQ96JP0 617 aa16.13■□□□□ 0.17
CTDSP1-201ENST00000273062 SLC7A5P2Q9GIP4 190 aa16.13■□□□□ 0.17
CTDSP1-201ENST00000273062 COQ10BQ9H8M1 238 aa16.13■□□□□ 0.17
CTDSP1-201ENST00000273062 RIPK3Q9Y572 518 aa16.13■□□□□ 0.17
CTDSP1-201ENST00000273062 CLOCKO15516 846 aa16.13■□□□□ 0.17
CTDSP1-201ENST00000273062 BMP10O95393 424 aa16.13■□□□□ 0.17
CTDSP1-201ENST00000273062 ESRRBO95718 433 aa16.13■□□□□ 0.17
CTDSP1-201ENST00000273062 MYCLP12524 364 aaPredicted RBP16.13■□□□□ 0.17
CTDSP1-201ENST00000273062 ADSLP30566 484 aaPredicted RBP16.13■□□□□ 0.17
CTDSP1-201ENST00000273062 L1CAMP32004 1257 aa16.13■□□□□ 0.17
CTDSP1-201ENST00000273062 IDUAP35475 653 aa16.13■□□□□ 0.17
CTDSP1-201ENST00000273062 BMPR1AP36894 532 aa16.13■□□□□ 0.17
CTDSP1-201ENST00000273062 FLOT2Q14254 428 aa16.13■□□□□ 0.17
CTDSP1-201ENST00000273062 NDUFA5Q16718 116 aa16.13■□□□□ 0.17
CTDSP1-201ENST00000273062 TKFCQ3LXA3 575 aa16.13■□□□□ 0.17
CTDSP1-201ENST00000273062 MGAT5BQ3V5L5 792 aa16.13■□□□□ 0.17
CTDSP1-201ENST00000273062 ODR4Q5SWX8 454 aa16.13■□□□□ 0.17
CTDSP1-201ENST00000273062 ATG4CQ96DT6 458 aa16.13■□□□□ 0.17
CTDSP1-201ENST00000273062 NACC1Q96RE7 527 aa16.13■□□□□ 0.17
CTDSP1-201ENST00000273062 TMEM121Q9BTD3 319 aa16.13■□□□□ 0.17
CTDSP1-201ENST00000273062 SIRPGQ9P1W8 387 aa16.13■□□□□ 0.17
CTDSP1-201ENST00000273062 SLC27A5Q9Y2P5 690 aa16.13■□□□□ 0.17
CTDSP1-201ENST00000273062 IFT52Q9Y366 437 aa16.13■□□□□ 0.17
CTDSP1-201ENST00000273062 PCDHGA11Q9Y5H2 935 aa16.13■□□□□ 0.17
CTDSP1-201ENST00000273062 PIK3R2O00459 728 aa16.12■□□□□ 0.17
CTDSP1-201ENST00000273062 ATP2A1O14983 1001 aa16.12■□□□□ 0.17
CTDSP1-201ENST00000273062 TEX28O15482 410 aa16.12■□□□□ 0.17
CTDSP1-201ENST00000273062 SNNO75324 88 aaPredicted RBP16.12■□□□□ 0.17
CTDSP1-201ENST00000273062 KRT75O95678 551 aa16.12■□□□□ 0.17
CTDSP1-201ENST00000273062 PKNOX1P55347 436 aa16.12■□□□□ 0.17
CTDSP1-201ENST00000273062 PRAMEP78395 509 aa16.12■□□□□ 0.17
CTDSP1-201ENST00000273062 DNASE1L3Q13609 305 aa16.12■□□□□ 0.17
CTDSP1-201ENST00000273062 UGCGQ16739 394 aa16.12■□□□□ 0.17
CTDSP1-201ENST00000273062 CCDC58Q4VC31 144 aa16.12■□□□□ 0.17
CTDSP1-201ENST00000273062 NUDCD3Q8IVD9 361 aa16.12■□□□□ 0.17
CTDSP1-201ENST00000273062 FAM47BQ8NA70 645 aa16.12■□□□□ 0.17
CTDSP1-201ENST00000273062 BHLHE22Q8NFJ8 381 aaPredicted RBP16.12■□□□□ 0.17
CTDSP1-201ENST00000273062 ACDQ96AP0 544 aa16.12■□□□□ 0.17
CTDSP1-201ENST00000273062 PPCSQ9HAB8 311 aa16.12■□□□□ 0.17
CTDSP1-201ENST00000273062 RIC8BQ9NVN3 520 aa16.12■□□□□ 0.17
CTDSP1-201ENST00000273062 KLQ9UEF7 1012 aa16.12■□□□□ 0.17
CTDSP1-201ENST00000273062 AGO2Q9UKV8 859 aaKnown RBP16.12■□□□□ 0.17
CTDSP1-201ENST00000273062 NFASCO94856 1347 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms