RNA–Protein interactions for RNA: ENST00000268049.11

USP3-201, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 5,311 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-201ENST00000268049 SAPCD2Q86UD0 394 aa8.02□□□□□ -1.13
USP3-201ENST00000268049 DENND1AQ8TEH3 1009 aa8.02□□□□□ -1.13
USP3-201ENST00000268049 ERP27Q96DN0 273 aa8.02□□□□□ -1.13
USP3-201ENST00000268049 CPB2Q96IY4 423 aa8.02□□□□□ -1.13
USP3-201ENST00000268049 WDR24Q96S15 920 aa8.02□□□□□ -1.13
USP3-201ENST00000268049 FAM49BQ9NUQ9 324 aa8.02□□□□□ -1.13
USP3-201ENST00000268049 ATAD3AQ9NVI7 634 aa8.02□□□□□ -1.13
USP3-201ENST00000268049 SNTG2Q9NY99 539 aa8.02□□□□□ -1.13
USP3-201ENST00000268049 RWDD2AQ9UIY3 292 aa8.02□□□□□ -1.13
USP3-201ENST00000268049 BLOC1S6Q9UL45 172 aa8.02□□□□□ -1.13
USP3-201ENST00000268049 L3MBTL1Q9Y468 752 aa8.02□□□□□ -1.13
USP3-201ENST00000268049 SLC37A4O43826 429 aa8.02□□□□□ -1.13
USP3-201ENST00000268049 SERPING1P05155 500 aa8.02□□□□□ -1.13
USP3-201ENST00000268049 KITP10721 976 aa8.02□□□□□ -1.13
USP3-201ENST00000268049 EIF4BP23588 611 aaKnown RBP8.02□□□□□ -1.13
USP3-201ENST00000268049 MZF1P28698 734 aaPredicted RBP8.02□□□□□ -1.13
USP3-201ENST00000268049 ACOT2P49753 483 aa8.02□□□□□ -1.13
USP3-201ENST00000268049 CACNA2D1P54289 1103 aa8.02□□□□□ -1.13
USP3-201ENST00000268049 MORF4L2Q15014 288 aa8.02□□□□□ -1.13
USP3-201ENST00000268049 RBBP7Q16576 425 aa8.02□□□□□ -1.13
USP3-201ENST00000268049 UGP2Q16851 508 aa8.02□□□□□ -1.13
USP3-201ENST00000268049 PID1Q7Z2X4 250 aa8.02□□□□□ -1.13
USP3-201ENST00000268049 VSIG10LQ86VR7 867 aa8.02□□□□□ -1.13
USP3-201ENST00000268049 BEND7Q8N7W2 519 aaPredicted RBP8.02□□□□□ -1.13
USP3-201ENST00000268049 EME1Q96AY2 570 aa8.02□□□□□ -1.13
USP3-201ENST00000268049 MCRS1Q96EZ8 462 aa8.02□□□□□ -1.13
USP3-201ENST00000268049 MPP4Q96JB8 637 aa8.02□□□□□ -1.13
USP3-201ENST00000268049 WWP1Q9H0M0 922 aa8.02□□□□□ -1.13
USP3-201ENST00000268049 PHPT1Q9NRX4 125 aaPredicted RBP8.02□□□□□ -1.13
USP3-201ENST00000268049 RPS6KB2Q9UBS0 482 aa8.02□□□□□ -1.13
USP3-201ENST00000268049 NHSQ6T4R5 1651 aa8.02□□□□□ -1.13
USP3-201ENST00000268049 ATRNL1Q5VV63 1379 aa8.02□□□□□ -1.13
USP3-201ENST00000268049 CCDC78A2IDD5 438 aa8.01□□□□□ -1.13
USP3-201ENST00000268049 QSOX1O00391 747 aa8.01□□□□□ -1.13
USP3-201ENST00000268049 ATP6V1G2O95670 118 aa8.01□□□□□ -1.13
USP3-201ENST00000268049 AGTP01019 485 aa8.01□□□□□ -1.13
USP3-201ENST00000268049 ITGAVP06756 1048 aa8.01□□□□□ -1.13
USP3-201ENST00000268049 UQCRBP14927 111 aa8.01□□□□□ -1.13
USP3-201ENST00000268049 CCR1P32246 355 aa8.01□□□□□ -1.13
USP3-201ENST00000268049 SCTRP47872 440 aa8.01□□□□□ -1.13
USP3-201ENST00000268049 KCTD21Q4G0X4 260 aa8.01□□□□□ -1.13
USP3-201ENST00000268049 SNX30Q5VWJ9 437 aa8.01□□□□□ -1.13
USP3-201ENST00000268049 GPR141Q7Z602 305 aa8.01□□□□□ -1.13
USP3-201ENST00000268049 C4orf19Q8IY42 314 aa8.01□□□□□ -1.13
USP3-201ENST00000268049 DSELQ8IZU8 1212 aa8.01□□□□□ -1.13
USP3-201ENST00000268049 TMEM175Q9BSA9 504 aa8.01□□□□□ -1.13
USP3-201ENST00000268049 CNPY3Q9BT09 278 aa8.01□□□□□ -1.13
USP3-201ENST00000268049 CRTAC1Q9NQ79 661 aa8.01□□□□□ -1.13
USP3-201ENST00000268049 ADGRG1Q9Y653 693 aa8.01□□□□□ -1.13
USP3-201ENST00000268049 H0YC42 278 aa8.01□□□□□ -1.13
USP3-201ENST00000268049 TAF4O00268 1085 aa8.01□□□□□ -1.13
USP3-201ENST00000268049 ASNA1O43681 348 aa8.01□□□□□ -1.13
USP3-201ENST00000268049 FSBPO95073 299 aa8.01□□□□□ -1.13
USP3-201ENST00000268049 IL10P22301 178 aa8.01□□□□□ -1.13
USP3-201ENST00000268049 NUP107P57740 925 aa8.01□□□□□ -1.13
USP3-201ENST00000268049 EVX2Q03828 476 aa8.01□□□□□ -1.13
USP3-201ENST00000268049 FAM124AQ86V42 546 aa8.01□□□□□ -1.13
USP3-201ENST00000268049 HNRNPLLQ8WVV9 542 aaKnown RBP8.01□□□□□ -1.13
USP3-201ENST00000268049 DDX1Q92499 740 aaKnown RBP8.01□□□□□ -1.13
USP3-201ENST00000268049 LENG9Q96B70 501 aa8.01□□□□□ -1.13
USP3-201ENST00000268049 TMEM237Q96Q45 408 aa8.01□□□□□ -1.13
USP3-201ENST00000268049 PORCNQ9H237 461 aa8.01□□□□□ -1.13
USP3-201ENST00000268049 MMADHCQ9H3L0 296 aaPredicted RBP8.01□□□□□ -1.13
USP3-201ENST00000268049 NEUROD4Q9HD90 331 aa8.01□□□□□ -1.13
USP3-201ENST00000268049 DDIT4Q9NX09 232 aa8.01□□□□□ -1.13
USP3-201ENST00000268049 GPSM3Q9Y4H4 160 aa8.01□□□□□ -1.13
USP3-201ENST00000268049 HEY1Q9Y5J3 304 aa8.01□□□□□ -1.13
USP3-201ENST00000268049 CBX4O00257 560 aa8.01□□□□□ -1.13
USP3-201ENST00000268049 PDXKO00764 312 aa8.01□□□□□ -1.13
USP3-201ENST00000268049 DNALI1O14645 258 aaPredicted RBP8.01□□□□□ -1.13
USP3-201ENST00000268049 HMOX2P30519 316 aa8.01□□□□□ -1.13
USP3-201ENST00000268049 HSPA13P48723 471 aa8.01□□□□□ -1.13
USP3-201ENST00000268049 SCNN1GP51170 649 aa8.01□□□□□ -1.13
USP3-201ENST00000268049 ROR1Q01973 937 aa8.01□□□□□ -1.13
USP3-201ENST00000268049 ATP1A4Q13733 1029 aa8.01□□□□□ -1.13
USP3-201ENST00000268049 INSCQ1MX18 579 aa8.01□□□□□ -1.13
USP3-201ENST00000268049 BBS9Q3SYG4 887 aa8.01□□□□□ -1.13
USP3-201ENST00000268049 ATP13A4Q4VNC1 1196 aa8.01□□□□□ -1.13
USP3-201ENST00000268049 MTHFD1LQ6UB35 978 aa8.01□□□□□ -1.13
USP3-201ENST00000268049 ZNF852Q6ZMS4 543 aa8.01□□□□□ -1.13
USP3-201ENST00000268049 PTAR1Q7Z6K3 402 aaPredicted RBP8.01□□□□□ -1.13
USP3-201ENST00000268049 LINC00523Q86TU6 105 aa8.01□□□□□ -1.13
USP3-201ENST00000268049 C12orf42Q96LP6 360 aa8.01□□□□□ -1.13
USP3-201ENST00000268049 SAYSD1Q9NPB0 183 aa8.01□□□□□ -1.13
USP3-201ENST00000268049 KRCC1Q9NPI7 259 aaPredicted RBP8.01□□□□□ -1.13
USP3-201ENST00000268049 KLF15Q9UIH9 416 aa8.01□□□□□ -1.13
USP3-201ENST00000268049 R3HDM2Q9Y2K5 976 aaKnown RBP8.01□□□□□ -1.13
USP3-201ENST00000268049 LRRC14BA6NHZ5 514 aa8.01□□□□□ -1.13
USP3-201ENST00000268049 GRM6O15303 877 aa8.01□□□□□ -1.13
USP3-201ENST00000268049 IL1BP01584 269 aa8.01□□□□□ -1.13
USP3-201ENST00000268049 NMT1P30419 496 aaKnown RBP8.01□□□□□ -1.13
USP3-201ENST00000268049 KDSRQ06136 332 aa8.01□□□□□ -1.13
USP3-201ENST00000268049 ELP6Q0PNE2 266 aa8.01□□□□□ -1.13
USP3-201ENST00000268049 PRPF38BQ5VTL8 546 aaKnown RBP8.01□□□□□ -1.13
USP3-201ENST00000268049 DENND5BQ6ZUT9 1274 aa8.01□□□□□ -1.13
USP3-201ENST00000268049 BTN2A1Q7KYR7 527 aa8.01□□□□□ -1.13
USP3-201ENST00000268049 FBXL16Q8N461 479 aa8.01□□□□□ -1.13
USP3-201ENST00000268049 PHOSPHO2Q8TCD6 241 aa8.01□□□□□ -1.13
USP3-201ENST00000268049 ABHD10Q9NUJ1 306 aa8.01□□□□□ -1.13
USP3-201ENST00000268049 AHSPQ9NZD4 102 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms