RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 IQCKQ8N0W5 287 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 CENPSQ8N2Z9 138 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 TFB1MQ8WVM0 346 aaKnown RBP5.83□□□□□ -1.48
VCAN-201ENST00000265077 CKAP2Q8WWK9 683 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 HTRA1Q92743 480 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 ZNF518BQ9C0D4 1074 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 ENTPD7Q9NQZ7 604 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 NCKIPSDQ9NZQ3 722 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 AAR2Q9Y312 384 aaKnown RBP5.83□□□□□ -1.48
VCAN-201ENST00000265077 NPHP3-ACAD11A0A0J9YXS1 232 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 CAPN15O75808 1086 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 IFNA14P01570 189 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 NFE2L1Q14494 772 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 SPDYAQ5MJ70 313 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 CACHD1Q5VU97 1274 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 KBTBD7Q8WVZ9 684 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 FAM111AQ96PZ2 611 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 SPOCK3Q9BQ16 436 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 DCLK3Q9C098 648 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 CLDN25C9JDP6 229 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 RALBP11234 206 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 PON1P27169 355 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 XKR3Q5GH77 459 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 GALNT7Q86SF2 657 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 SCN4BQ8IWT1 228 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 ZNF669Q96BR6 464 aaPredicted RBP5.83□□□□□ -1.48
VCAN-201ENST00000265077 OSBPL11Q9BXB4 747 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 PCDH9Q9HC56 1237 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 MIA3Q5JRA6 1907 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 A0A087X0T9 212 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 ZSCAN5CA6NGD5 496 aaPredicted RBP5.83□□□□□ -1.48
VCAN-201ENST00000265077 MYO1GB0I1T2 1018 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 ARIH2O95376 493 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 PRKCBP05771 671 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 DBTP11182 482 aaKnown RBP5.83□□□□□ -1.48
VCAN-201ENST00000265077 MMP13P45452 471 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 RAD51Q06609 339 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 FAM83EQ2M2I3 478 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 ZNF662Q6ZS27 426 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 IFNEQ86WN2 208 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 CCDC60Q8IWA6 550 aaPredicted RBP5.83□□□□□ -1.48
VCAN-201ENST00000265077 MICALL2Q8IY33 904 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 ULK2Q8IYT8 1036 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 C19orf18Q8NEA5 215 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 OR7G1Q8NGA0 311 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 BTBD9Q96Q07 612 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 ZSCAN5AQ9BUG6 496 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 OXCT2Q9BYC2 517 aaPredicted RBP5.83□□□□□ -1.48
VCAN-201ENST00000265077 PRRG3Q9BZD7 231 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 DENND2DQ9H6A0 471 aaPredicted RBP5.83□□□□□ -1.48
VCAN-201ENST00000265077 CACNA1BQ00975 2339 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 VWDEQ8N2E2 1590 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 TNFRSF10AO00220 468 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 SOAT2O75908 522 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 APOL3O95236 402 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 OVGP1Q12889 678 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 MMRN1Q13201 1228 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 MAPRE1Q15691 268 aaKnown RBP5.83□□□□□ -1.48
VCAN-201ENST00000265077 CCNG2Q16589 344 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 WDR72Q3MJ13 1102 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 TRIQKQ629K1 86 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 KYAT3Q6YP21 454 aaKnown RBP5.83□□□□□ -1.48
VCAN-201ENST00000265077 ZNF398Q8TD17 642 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 ELMO2Q96JJ3 720 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 CPVLQ9H3G5 476 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 EFR3BQ9Y2G0 817 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 HLA-DRAP01903 254 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 PCNAP12004 261 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 LRP8Q14114 963 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 POLD3Q15054 466 aaPredicted RBP5.83□□□□□ -1.48
VCAN-201ENST00000265077 SMTNL2Q2TAL5 461 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 Q3C1V9 767 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 PKN3Q6P5Z2 889 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 DEFB107AQ8IZN7 70 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 USP13Q92995 863 aaPredicted RBP5.83□□□□□ -1.48
VCAN-201ENST00000265077 POLR3BQ9NW08 1133 aaPredicted RBP5.83□□□□□ -1.48
VCAN-201ENST00000265077 CNOT1A5YKK6 2376 aaKnown RBP5.83□□□□□ -1.48
VCAN-201ENST00000265077 SHBGP04278 402 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 PABPC1P11940 636 aaKnown RBP5.83□□□□□ -1.48
VCAN-201ENST00000265077 F8A1P23610 371 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 IFI35P80217 286 aaPredicted RBP5.83□□□□□ -1.48
VCAN-201ENST00000265077 SYCE2Q6PIF2 218 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 LAYNQ6UX15 382 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 IKBIPQ70UQ0 350 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 PDCD6IPQ8WUM4 868 aaKnown RBP5.83□□□□□ -1.48
VCAN-201ENST00000265077 ING3Q9NXR8 418 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 RGPD8O14715 1765 aaPredicted RBP5.83□□□□□ -1.48
VCAN-201ENST00000265077 FAM205CA6NFA0 338 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 NAT2P11245 290 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 TGM2P21980 687 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 NCF4Q15080 339 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 C2orf49Q9BVC5 232 aaPredicted RBP5.83□□□□□ -1.48
VCAN-201ENST00000265077 KIAA1257Q9ULG3 409 aa5.83□□□□□ -1.48
VCAN-201ENST00000265077 ATF6P18850 670 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 GP5P40197 560 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 NR2C2P49116 596 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 ERVK-9P63128 1117 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 NAB1Q13506 487 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 EMC2Q15006 297 aa5.82□□□□□ -1.48
VCAN-201ENST00000265077 CIAPIN1Q6FI81 312 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms