RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 COPG2Q9UBF2 871 aa18.38■□□□□ 0.53
COL5A3-201ENST00000264828 MYRFQ9Y2G1 1151 aa18.38■□□□□ 0.53
COL5A3-201ENST00000264828 TIMM13Q9Y5L4 95 aaPredicted RBP18.38■□□□□ 0.53
COL5A3-201ENST00000264828 TNFAIP8O95379 198 aa18.38■□□□□ 0.53
COL5A3-201ENST00000264828 ERVK-10P10266 1014 aa18.38■□□□□ 0.53
COL5A3-201ENST00000264828 FGFR1P11362 822 aa18.38■□□□□ 0.53
COL5A3-201ENST00000264828 HUNKP57058 714 aa18.38■□□□□ 0.53
COL5A3-201ENST00000264828 PTPN11Q06124 597 aaPredicted RBP18.38■□□□□ 0.53
COL5A3-201ENST00000264828 TSHZ1Q6ZSZ6 1077 aa18.38■□□□□ 0.53
COL5A3-201ENST00000264828 ANKRD13AQ8IZ07 590 aa18.38■□□□□ 0.53
COL5A3-201ENST00000264828 MCOLN2Q8IZK6 566 aa18.38■□□□□ 0.53
COL5A3-201ENST00000264828 SVOPQ8N4V2 548 aa18.38■□□□□ 0.53
COL5A3-201ENST00000264828 PYDC1Q8WXC3 89 aa18.38■□□□□ 0.53
COL5A3-201ENST00000264828 CDRT15Q96T59 188 aa18.38■□□□□ 0.53
COL5A3-201ENST00000264828 KIAA1257Q9ULG3 409 aa18.38■□□□□ 0.53
COL5A3-201ENST00000264828 H3BN98 237 aa18.38■□□□□ 0.53
COL5A3-201ENST00000264828 SEC22BO75396 215 aa18.38■□□□□ 0.53
COL5A3-201ENST00000264828 CKMP06732 381 aa18.38■□□□□ 0.53
COL5A3-201ENST00000264828 GARTP22102 1010 aa18.38■□□□□ 0.53
COL5A3-201ENST00000264828 PKNOX1P55347 436 aa18.38■□□□□ 0.53
COL5A3-201ENST00000264828 PPATQ06203 517 aa18.38■□□□□ 0.53
COL5A3-201ENST00000264828 ENKURQ8TC29 256 aa18.38■□□□□ 0.53
COL5A3-201ENST00000264828 MARK4Q96L34 752 aa18.38■□□□□ 0.53
COL5A3-201ENST00000264828 UBAP1Q9NZ09 502 aa18.38■□□□□ 0.53
COL5A3-201ENST00000264828 LNPEPQ9UIQ6 1025 aa18.38■□□□□ 0.53
COL5A3-201ENST00000264828 MROH7Q68CQ1 1323 aa18.38■□□□□ 0.53
COL5A3-201ENST00000264828 FAM205AQ6ZU69 1335 aa18.38■□□□□ 0.53
COL5A3-201ENST00000264828 GAS2O43903 313 aaKnown RBP18.38■□□□□ 0.53
COL5A3-201ENST00000264828 PIK3R1P27986 724 aa18.38■□□□□ 0.53
COL5A3-201ENST00000264828 BST2Q10589 180 aaKnown RBP18.38■□□□□ 0.53
COL5A3-201ENST00000264828 PRKAA1Q13131 559 aa18.38■□□□□ 0.53
COL5A3-201ENST00000264828 EML3Q32P44 896 aa18.38■□□□□ 0.53
COL5A3-201ENST00000264828 SCARA3Q6AZY7 606 aa18.38■□□□□ 0.53
COL5A3-201ENST00000264828 COMMD2Q86X83 199 aa18.38■□□□□ 0.53
COL5A3-201ENST00000264828 GATAD2AQ86YP4 633 aa18.38■□□□□ 0.53
COL5A3-201ENST00000264828 GRIP2Q9C0E4 1043 aa18.38■□□□□ 0.53
COL5A3-201ENST00000264828 LSM8O95777 96 aaKnown RBP18.37■□□□□ 0.53
COL5A3-201ENST00000264828 PGAM1P18669 254 aa18.37■□□□□ 0.53
COL5A3-201ENST00000264828 FBXO39Q8N4B4 442 aa18.37■□□□□ 0.53
COL5A3-201ENST00000264828 RORBQ92753 470 aa18.37■□□□□ 0.53
COL5A3-201ENST00000264828 ZNF624Q9P2J8 865 aaPredicted RBP18.37■□□□□ 0.53
COL5A3-201ENST00000264828 LDLRP01130 860 aa18.37■□□□□ 0.53
COL5A3-201ENST00000264828 PECAM1P16284 738 aaPredicted RBP18.37■□□□□ 0.53
COL5A3-201ENST00000264828 GTF2A2P52657 109 aa18.37■□□□□ 0.53
COL5A3-201ENST00000264828 HK2P52789 917 aa18.37■□□□□ 0.53
COL5A3-201ENST00000264828 FAAP100Q0VG06 881 aa18.37■□□□□ 0.53
COL5A3-201ENST00000264828 FIGNQ5HY92 759 aa18.37■□□□□ 0.53
COL5A3-201ENST00000264828 CBWD3Q5JTY5 395 aa18.37■□□□□ 0.53
COL5A3-201ENST00000264828 CBWD5Q5RIA9 395 aa18.37■□□□□ 0.53
COL5A3-201ENST00000264828 ZNF75CPQ92670 426 aaPredicted RBP18.37■□□□□ 0.53
COL5A3-201ENST00000264828 MRPL48Q96GC5 212 aaKnown RBP18.37■□□□□ 0.53
COL5A3-201ENST00000264828 EMILIN2Q9BXX0 1053 aa18.37■□□□□ 0.53
COL5A3-201ENST00000264828 THAP1Q9NVV9 213 aa18.37■□□□□ 0.53
COL5A3-201ENST00000264828 DCXO43602 365 aa18.37■□□□□ 0.53
COL5A3-201ENST00000264828 PLK1P53350 603 aa18.37■□□□□ 0.53
COL5A3-201ENST00000264828 TRAF3Q13114 568 aa18.37■□□□□ 0.53
COL5A3-201ENST00000264828 NRF1Q16656 503 aa18.37■□□□□ 0.53
COL5A3-201ENST00000264828 PRMT9Q6P2P2 845 aa18.37■□□□□ 0.53
COL5A3-201ENST00000264828 A1CFQ9NQ94 594 aaKnown RBP18.37■□□□□ 0.53
COL5A3-201ENST00000264828 MCM8Q9UJA3 840 aa18.37■□□□□ 0.53
COL5A3-201ENST00000264828 GPR182O15218 404 aa18.37■□□□□ 0.53
COL5A3-201ENST00000264828 VCLP18206 1134 aa18.37■□□□□ 0.53
COL5A3-201ENST00000264828 ALDH5A1P51649 535 aaPredicted RBP18.37■□□□□ 0.53
COL5A3-201ENST00000264828 ZNF438Q7Z4V0 828 aa18.37■□□□□ 0.53
COL5A3-201ENST00000264828 PACS2Q86VP3 889 aa18.37■□□□□ 0.53
COL5A3-201ENST00000264828 ATXN2LQ8WWM7 1075 aaKnown RBP18.37■□□□□ 0.53
COL5A3-201ENST00000264828 APBA2Q99767 749 aa18.37■□□□□ 0.53
COL5A3-201ENST00000264828 NUDT12Q9BQG2 462 aa18.37■□□□□ 0.53
COL5A3-201ENST00000264828 TBCDQ9BTW9 1192 aa18.37■□□□□ 0.53
COL5A3-201ENST00000264828 C15orf41Q9Y2V0 281 aa18.37■□□□□ 0.53
COL5A3-201ENST00000264828 TDRKHQ9Y2W6 561 aaKnown RBP18.37■□□□□ 0.53
COL5A3-201ENST00000264828 CENPXA8MT69 81 aa18.37■□□□□ 0.53
COL5A3-201ENST00000264828 AGRPO00253 132 aa18.37■□□□□ 0.53
COL5A3-201ENST00000264828 MED26O95402 600 aa18.37■□□□□ 0.53
COL5A3-201ENST00000264828 GJB6O95452 261 aa18.37■□□□□ 0.53
COL5A3-201ENST00000264828 FCGRTP55899 365 aa18.37■□□□□ 0.53
COL5A3-201ENST00000264828 ERVK-9P63128 1117 aa18.37■□□□□ 0.53
COL5A3-201ENST00000264828 TAF5Q15542 800 aa18.37■□□□□ 0.53
COL5A3-201ENST00000264828 CDKAL1Q5VV42 579 aa18.37■□□□□ 0.53
COL5A3-201ENST00000264828 MTSS1LQ765P7 747 aa18.37■□□□□ 0.53
COL5A3-201ENST00000264828 MICAL2O94851 1124 aa18.36■□□□□ 0.53
COL5A3-201ENST00000264828 BHLHE22Q8NFJ8 381 aaPredicted RBP18.36■□□□□ 0.53
COL5A3-201ENST00000264828 ERLEC1Q96DZ1 483 aa18.36■□□□□ 0.53
COL5A3-201ENST00000264828 CLEC4MQ9H2X3 399 aaPredicted RBP18.36■□□□□ 0.53
COL5A3-201ENST00000264828 FANCEQ9HB96 536 aa18.36■□□□□ 0.53
COL5A3-201ENST00000264828 SMIM31A0A1B0GVY4 71 aa18.36■□□□□ 0.53
COL5A3-201ENST00000264828 TMEM114B3SHH9 223 aa18.36■□□□□ 0.53
COL5A3-201ENST00000264828 ZNF286BP0CG31 522 aa18.36■□□□□ 0.53
COL5A3-201ENST00000264828 SREBF1P36956 1147 aa18.36■□□□□ 0.53
COL5A3-201ENST00000264828 IL12RB1P42701 662 aa18.36■□□□□ 0.53
COL5A3-201ENST00000264828 NPY2RP49146 381 aa18.36■□□□□ 0.53
COL5A3-201ENST00000264828 CDH24Q86UP0 819 aa18.36■□□□□ 0.53
COL5A3-201ENST00000264828 ABRAQ8N0Z2 381 aa18.36■□□□□ 0.53
COL5A3-201ENST00000264828 ATXN3LQ9H3M9 355 aa18.36■□□□□ 0.53
COL5A3-201ENST00000264828 IPPQ9Y573 584 aa18.36■□□□□ 0.53
COL5A3-201ENST00000264828 A0A096LPK6 155 aa18.36■□□□□ 0.53
COL5A3-201ENST00000264828 AMPD1P23109 780 aa18.36■□□□□ 0.53
COL5A3-201ENST00000264828 TSNQ15631 228 aaKnown RBP18.36■□□□□ 0.53
COL5A3-201ENST00000264828 Q4G0T1 1027 aa18.36■□□□□ 0.53
COL5A3-201ENST00000264828 ZNF484Q5JVG2 852 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms