RNA–Protein interactions for RNA: ENST00000262795.5

SHANK3-201, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS P5 TSL 5 BASIC

Gene SHANK3, Length 7,091 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-201ENST00000262795 EPHX1P07099 455 aa16.2■□□□□ 0.18
SHANK3-201ENST00000262795 CTSOP43234 321 aaPredicted RBP16.2■□□□□ 0.18
SHANK3-201ENST00000262795 DDR1Q08345 913 aa16.2■□□□□ 0.18
SHANK3-201ENST00000262795 KIAA0319LQ8IZA0 1049 aa16.2■□□□□ 0.18
SHANK3-201ENST00000262795 OR2W6PQ8NHA6 318 aa16.2■□□□□ 0.18
SHANK3-201ENST00000262795 RIPOR3Q96MK2 946 aa16.2■□□□□ 0.18
SHANK3-201ENST00000262795 ELOVL4Q9GZR5 314 aa16.2■□□□□ 0.18
SHANK3-201ENST00000262795 KIAA1683Q9H0B3 1180 aa16.2■□□□□ 0.18
SHANK3-201ENST00000262795 CLIC5Q9NZA1 410 aa16.2■□□□□ 0.18
SHANK3-201ENST00000262795 ZNF541Q9H0D2 1346 aa16.2■□□□□ 0.18
SHANK3-201ENST00000262795 RHPN2P1A8MT19 583 aa16.2■□□□□ 0.18
SHANK3-201ENST00000262795 GTPBP1O00178 669 aaKnown RBP16.2■□□□□ 0.18
SHANK3-201ENST00000262795 MTSS1O43312 755 aa16.2■□□□□ 0.18
SHANK3-201ENST00000262795 F9P00740 461 aa16.2■□□□□ 0.18
SHANK3-201ENST00000262795 TRAPPC11Q7Z392 1133 aa16.2■□□□□ 0.18
SHANK3-201ENST00000262795 DNAAF5Q86Y56 855 aa16.2■□□□□ 0.18
SHANK3-201ENST00000262795 CDK20Q8IZL9 346 aa16.2■□□□□ 0.18
SHANK3-201ENST00000262795 OSCP1Q8WVF1 389 aa16.2■□□□□ 0.18
SHANK3-201ENST00000262795 RNF31Q96EP0 1072 aa16.2■□□□□ 0.18
SHANK3-201ENST00000262795 C7orf25Q9BPX7 421 aa16.2■□□□□ 0.18
SHANK3-201ENST00000262795 IDI2Q9BXS1 227 aa16.2■□□□□ 0.18
SHANK3-201ENST00000262795 CELF4Q9BZC1 486 aaKnown RBP16.2■□□□□ 0.18
SHANK3-201ENST00000262795 SPHKAPQ2M3C7 1700 aa16.2■□□□□ 0.18
SHANK3-201ENST00000262795 LOC100653049A0A140TA62 436 aa16.2■□□□□ 0.18
SHANK3-201ENST00000262795 CLDN5O00501 218 aa16.2■□□□□ 0.18
SHANK3-201ENST00000262795 TEX28O15482 410 aa16.2■□□□□ 0.18
SHANK3-201ENST00000262795 KRT34O76011 436 aa16.2■□□□□ 0.18
SHANK3-201ENST00000262795 NFKB1P19838 968 aa16.2■□□□□ 0.18
SHANK3-201ENST00000262795 TBC1D25Q3MII6 688 aa16.2■□□□□ 0.18
SHANK3-201ENST00000262795 CELF3Q5SZQ8 465 aaKnown RBP16.2■□□□□ 0.18
SHANK3-201ENST00000262795 STRA8Q7Z7C7 330 aa16.2■□□□□ 0.18
SHANK3-201ENST00000262795 COLGALT1Q8NBJ5 622 aa16.2■□□□□ 0.18
SHANK3-201ENST00000262795 UXS1Q8NBZ7 420 aa16.2■□□□□ 0.18
SHANK3-201ENST00000262795 SLAIN1Q8ND83 568 aa16.2■□□□□ 0.18
SHANK3-201ENST00000262795 GTF3C4Q9UKN8 822 aa16.2■□□□□ 0.18
SHANK3-201ENST00000262795 PCDHB11Q9Y5F2 797 aa16.2■□□□□ 0.18
SHANK3-201ENST00000262795 NEXMIFQ5QGS0 1516 aa16.2■□□□□ 0.18
SHANK3-201ENST00000262795 CROCC2H7BZ55 1655 aa16.2■□□□□ 0.18
SHANK3-201ENST00000262795 NR5A2O00482 541 aa16.2■□□□□ 0.18
SHANK3-201ENST00000262795 PHF2O75151 1096 aa16.2■□□□□ 0.18
SHANK3-201ENST00000262795 HIST1H2ABP04908 130 aa16.2■□□□□ 0.18
SHANK3-201ENST00000262795 MUTP22033 750 aa16.2■□□□□ 0.18
SHANK3-201ENST00000262795 RPA3P35244 121 aaPredicted RBP16.2■□□□□ 0.18
SHANK3-201ENST00000262795 DUSP4Q13115 394 aa16.2■□□□□ 0.18
SHANK3-201ENST00000262795 TMC5Q6UXY8 1006 aa16.2■□□□□ 0.18
SHANK3-201ENST00000262795 HIST3H2AQ7L7L0 130 aa16.2■□□□□ 0.18
SHANK3-201ENST00000262795 ATG4AQ8WYN0 398 aa16.2■□□□□ 0.18
SHANK3-201ENST00000262795 HIST1H2ACQ93077 130 aa16.2■□□□□ 0.18
SHANK3-201ENST00000262795 CFAP97Q9P2B7 532 aa16.2■□□□□ 0.18
SHANK3-201ENST00000262795 TMCC3Q9ULS5 477 aa16.2■□□□□ 0.18
SHANK3-201ENST00000262795 COPG1Q9Y678 874 aaKnown RBP16.2■□□□□ 0.18
SHANK3-201ENST00000262795 SLC25A12O75746 678 aa16.19■□□□□ 0.18
SHANK3-201ENST00000262795 GMCL1P1Q8NEA9 526 aa16.19■□□□□ 0.18
SHANK3-201ENST00000262795 CHP1Q99653 195 aa16.19■□□□□ 0.18
SHANK3-201ENST00000262795 DPEP2Q9H4A9 486 aa16.19■□□□□ 0.18
SHANK3-201ENST00000262795 RMND5AQ9H871 391 aa16.19■□□□□ 0.18
SHANK3-201ENST00000262795 SLC15A5A6NIM6 579 aa16.19■□□□□ 0.18
SHANK3-201ENST00000262795 ZNF189O75820 626 aaPredicted RBP16.19■□□□□ 0.18
SHANK3-201ENST00000262795 TFE3P19532 575 aaPredicted RBP16.19■□□□□ 0.18
SHANK3-201ENST00000262795 ITGA8P53708 1063 aa16.19■□□□□ 0.18
SHANK3-201ENST00000262795 SNRPD1P62314 119 aaKnown RBP16.19■□□□□ 0.18
SHANK3-201ENST00000262795 HTRA3P83110 453 aa16.19■□□□□ 0.18
SHANK3-201ENST00000262795 PHF19Q5T6S3 580 aa16.19■□□□□ 0.18
SHANK3-201ENST00000262795 C16orf46Q6P387 395 aa16.19■□□□□ 0.18
SHANK3-201ENST00000262795 DPP10Q8N608 796 aa16.19■□□□□ 0.18
SHANK3-201ENST00000262795 GFM2Q969S9 779 aaKnown RBP16.19■□□□□ 0.18
SHANK3-201ENST00000262795 TFR2Q9UP52 801 aa16.19■□□□□ 0.18
SHANK3-201ENST00000262795 NCOA3Q9Y6Q9 1424 aa16.19■□□□□ 0.18
SHANK3-201ENST00000262795 FAM129CQ86XR2 697 aa16.19■□□□□ 0.18
SHANK3-201ENST00000262795 WDR49Q8IV35 697 aa16.19■□□□□ 0.18
SHANK3-201ENST00000262795 DCLK3Q9C098 648 aa16.19■□□□□ 0.18
SHANK3-201ENST00000262795 THAP2Q9H0W7 228 aa16.19■□□□□ 0.18
SHANK3-201ENST00000262795 GPAMQ9HCL2 828 aa16.19■□□□□ 0.18
SHANK3-201ENST00000262795 CIDEBQ9UHD4 219 aa16.19■□□□□ 0.18
SHANK3-201ENST00000262795 PNPLA6Q8IY17 1366 aa16.19■□□□□ 0.18
SHANK3-201ENST00000262795 TSC22D1Q15714 1073 aa16.19■□□□□ 0.18
SHANK3-201ENST00000262795 CYP4Z1Q86W10 505 aa16.19■□□□□ 0.18
SHANK3-201ENST00000262795 LRRC1Q9BTT6 524 aa16.19■□□□□ 0.18
SHANK3-201ENST00000262795 TBCDQ9BTW9 1192 aa16.19■□□□□ 0.18
SHANK3-201ENST00000262795 DIP2AQ14689 1571 aa16.19■□□□□ 0.18
SHANK3-201ENST00000262795 GLTPD2A6NH11 291 aa16.19■□□□□ 0.18
SHANK3-201ENST00000262795 BTBD19C9JJ37 291 aa16.19■□□□□ 0.18
SHANK3-201ENST00000262795 HSPA14Q0VDF9 509 aa16.19■□□□□ 0.18
SHANK3-201ENST00000262795 FTHL17Q9BXU8 183 aa16.19■□□□□ 0.18
SHANK3-201ENST00000262795 DDX4Q9NQI0 724 aaKnown RBP16.19■□□□□ 0.18
SHANK3-201ENST00000262795 UVRAGQ9P2Y5 699 aa16.19■□□□□ 0.18
SHANK3-201ENST00000262795 NRCAMQ92823 1304 aa16.19■□□□□ 0.18
SHANK3-201ENST00000262795 YBX3P16989 372 aaKnown RBP eCLIP16.18■□□□□ 0.18
SHANK3-201ENST00000262795 IRX1P78414 480 aaPredicted RBP16.18■□□□□ 0.18
SHANK3-201ENST00000262795 ARL10Q8N8L6 244 aa16.18■□□□□ 0.18
SHANK3-201ENST00000262795 SERPINB11Q96P15 392 aa16.18■□□□□ 0.18
SHANK3-201ENST00000262795 S100A13Q99584 98 aa16.18■□□□□ 0.18
SHANK3-201ENST00000262795 LRRC4BQ9NT99 713 aa16.18■□□□□ 0.18
SHANK3-201ENST00000262795 A8MU76 341 aa16.18■□□□□ 0.18
SHANK3-201ENST00000262795 PEX1O43933 1283 aa16.18■□□□□ 0.18
SHANK3-201ENST00000262795 HMGB4Q8WW32 186 aa16.18■□□□□ 0.18
SHANK3-201ENST00000262795 OR8D1Q8WZ84 308 aa16.18■□□□□ 0.18
SHANK3-201ENST00000262795 TMPRSS4Q9NRS4 437 aa16.18■□□□□ 0.18
SHANK3-201ENST00000262795 STMN3Q9NZ72 180 aa16.18■□□□□ 0.18
SHANK3-201ENST00000262795 HPS5Q9UPZ3 1129 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms