RNA–Protein interactions for RNA: ENST00000262395.9

TRAF4-201, Transcript of TNF receptor associated factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF4, Length 2,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-201ENST00000262395 VCX3BQ9H321 246 aa18.46■□□□□ 0.55
TRAF4-201ENST00000262395 WDR55Q9H6Y2 383 aaPredicted RBP18.46■□□□□ 0.55
TRAF4-201ENST00000262395 VCX3AQ9NNX9 186 aa18.46■□□□□ 0.55
TRAF4-201ENST00000262395 H3BNX3 289 aa18.46■□□□□ 0.55
TRAF4-201ENST00000262395 CFLARO15519 480 aa18.46■□□□□ 0.55
TRAF4-201ENST00000262395 ICAM3P32942 547 aa18.46■□□□□ 0.55
TRAF4-201ENST00000262395 TNFAIP1Q13829 316 aa18.46■□□□□ 0.55
TRAF4-201ENST00000262395 TLR1Q15399 786 aa18.46■□□□□ 0.55
TRAF4-201ENST00000262395 LRRC23Q53EV4 343 aaPredicted RBP18.46■□□□□ 0.55
TRAF4-201ENST00000262395 EFCAB12Q6NXP0 572 aa18.46■□□□□ 0.55
TRAF4-201ENST00000262395 OLFML1Q6UWY5 402 aa18.46■□□□□ 0.55
TRAF4-201ENST00000262395 CATSPERGQ6ZRH7 1159 aa18.46■□□□□ 0.55
TRAF4-201ENST00000262395 TTC30AQ86WT1 665 aa18.46■□□□□ 0.55
TRAF4-201ENST00000262395 FBXW8Q8N3Y1 598 aa18.46■□□□□ 0.55
TRAF4-201ENST00000262395 CCDC185Q8N715 623 aa18.46■□□□□ 0.55
TRAF4-201ENST00000262395 COPS5Q92905 334 aa18.46■□□□□ 0.55
TRAF4-201ENST00000262395 OR52B2Q96RD2 323 aa18.46■□□□□ 0.55
TRAF4-201ENST00000262395 SYBUQ9NX95 663 aa18.46■□□□□ 0.55
TRAF4-201ENST00000262395 COPG2Q9UBF2 871 aa18.46■□□□□ 0.55
TRAF4-201ENST00000262395 ITGA11Q9UKX5 1188 aa18.46■□□□□ 0.55
TRAF4-201ENST00000262395 C15orf38-AP3S2A0A0A6YYH1 394 aa18.45■□□□□ 0.54
TRAF4-201ENST00000262395 NOP56O00567 594 aaKnown RBP18.45■□□□□ 0.54
TRAF4-201ENST00000262395 ZNF195O14628 629 aa18.45■□□□□ 0.54
TRAF4-201ENST00000262395 AMHP03971 560 aa18.45■□□□□ 0.54
TRAF4-201ENST00000262395 GOT1P17174 413 aa18.45■□□□□ 0.54
TRAF4-201ENST00000262395 EML3Q32P44 896 aa18.45■□□□□ 0.54
TRAF4-201ENST00000262395 ARPINQ7Z6K5 226 aa18.45■□□□□ 0.54
TRAF4-201ENST00000262395 COLGALT1Q8NBJ5 622 aa18.45■□□□□ 0.54
TRAF4-201ENST00000262395 CMTM5Q96DZ9 223 aa18.45■□□□□ 0.54
TRAF4-201ENST00000262395 MPP4Q96JB8 637 aa18.45■□□□□ 0.54
TRAF4-201ENST00000262395 LENG8Q96PV6 779 aaPredicted RBP18.45■□□□□ 0.54
TRAF4-201ENST00000262395 DTLQ9NZJ0 730 aa18.45■□□□□ 0.54
TRAF4-201ENST00000262395 TXNDC16Q9P2K2 825 aa18.45■□□□□ 0.54
TRAF4-201ENST00000262395 APPL1Q9UKG1 709 aa18.45■□□□□ 0.54
TRAF4-201ENST00000262395 ADAMTS5Q9UNA0 930 aa18.45■□□□□ 0.54
TRAF4-201ENST00000262395 DTNAQ9Y4J8 743 aa18.45■□□□□ 0.54
TRAF4-201ENST00000262395 BRWD3Q6RI45 1802 aa18.45■□□□□ 0.54
TRAF4-201ENST00000262395 hCG_2014768A0A024R1R8 64 aa18.45■□□□□ 0.54
TRAF4-201ENST00000262395 PAPSS1O43252 624 aaPredicted RBP18.45■□□□□ 0.54
TRAF4-201ENST00000262395 GCATO75600 419 aa18.45■□□□□ 0.54
TRAF4-201ENST00000262395 DPEP1P16444 411 aa18.45■□□□□ 0.54
TRAF4-201ENST00000262395 MAGEA6P43360 314 aa18.45■□□□□ 0.54
TRAF4-201ENST00000262395 IRF9Q00978 393 aa18.45■□□□□ 0.54
TRAF4-201ENST00000262395 KCNN1Q92952 543 aa18.45■□□□□ 0.54
TRAF4-201ENST00000262395 AGAP3Q96P47 875 aa18.45■□□□□ 0.54
TRAF4-201ENST00000262395 OLFM3Q96PB7 478 aa18.45■□□□□ 0.54
TRAF4-201ENST00000262395 LMCD1Q9NZU5 365 aa18.45■□□□□ 0.54
TRAF4-201ENST00000262395 BARX2Q9UMQ3 279 aaPredicted RBP18.45■□□□□ 0.54
TRAF4-201ENST00000262395 CCDC78A2IDD5 438 aa18.44■□□□□ 0.54
TRAF4-201ENST00000262395 SOWAHBA6NEL2 793 aa18.44■□□□□ 0.54
TRAF4-201ENST00000262395 HSPA4LO95757 839 aa18.44■□□□□ 0.54
TRAF4-201ENST00000262395 CPA3P15088 417 aa18.44■□□□□ 0.54
TRAF4-201ENST00000262395 ALDH1A3P47895 512 aa18.44■□□□□ 0.54
TRAF4-201ENST00000262395 NUDT2P50583 147 aa18.44■□□□□ 0.54
TRAF4-201ENST00000262395 CHN2P52757 468 aa18.44■□□□□ 0.54
TRAF4-201ENST00000262395 PKNOX1P55347 436 aa18.44■□□□□ 0.54
TRAF4-201ENST00000262395 MRPS22P82650 360 aaKnown RBP18.44■□□□□ 0.54
TRAF4-201ENST00000262395 CDK18Q07002 472 aa18.44■□□□□ 0.54
TRAF4-201ENST00000262395 TIFABQ6ZNK6 161 aa18.44■□□□□ 0.54
TRAF4-201ENST00000262395 ADGRG6Q86SQ4 1221 aa18.44■□□□□ 0.54
TRAF4-201ENST00000262395 SESTD1Q86VW0 696 aa18.44■□□□□ 0.54
TRAF4-201ENST00000262395 TP53INP2Q8IXH6 220 aa18.44■□□□□ 0.54
TRAF4-201ENST00000262395 CXorf38Q8TB03 319 aa18.44■□□□□ 0.54
TRAF4-201ENST00000262395 NDRG1Q92597 394 aaKnown RBP18.44■□□□□ 0.54
TRAF4-201ENST00000262395 USP13Q92995 863 aaPredicted RBP18.44■□□□□ 0.54
TRAF4-201ENST00000262395 ZDHHC7Q9NXF8 308 aa18.44■□□□□ 0.54
TRAF4-201ENST00000262395 AP4E1Q9UPM8 1137 aa18.44■□□□□ 0.54
TRAF4-201ENST00000262395 SORCS3Q9UPU3 1222 aa18.44■□□□□ 0.54
TRAF4-201ENST00000262395 HES2Q9Y543 173 aa18.44■□□□□ 0.54
TRAF4-201ENST00000262395 LCP1P13796 627 aa18.44■□□□□ 0.54
TRAF4-201ENST00000262395 SAT1P21673 171 aa18.44■□□□□ 0.54
TRAF4-201ENST00000262395 PMLP29590 882 aa18.44■□□□□ 0.54
TRAF4-201ENST00000262395 OAZ1P54368 228 aa18.44■□□□□ 0.54
TRAF4-201ENST00000262395 NIPAL4Q0D2K0 466 aa18.44■□□□□ 0.54
TRAF4-201ENST00000262395 TMC7Q7Z402 723 aa18.44■□□□□ 0.54
TRAF4-201ENST00000262395 NCAPG2Q86XI2 1143 aa18.44■□□□□ 0.54
TRAF4-201ENST00000262395 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.44■□□□□ 0.54
TRAF4-201ENST00000262395 CCNYQ8ND76 341 aa18.44■□□□□ 0.54
TRAF4-201ENST00000262395 CDKL2Q92772 493 aa18.44■□□□□ 0.54
TRAF4-201ENST00000262395 APBB2Q92870 758 aa18.44■□□□□ 0.54
TRAF4-201ENST00000262395 MARK4Q96L34 752 aa18.44■□□□□ 0.54
TRAF4-201ENST00000262395 CNBD2Q96M20 576 aa18.44■□□□□ 0.54
TRAF4-201ENST00000262395 KCTD15Q96SI1 283 aaPredicted RBP18.44■□□□□ 0.54
TRAF4-201ENST00000262395 FZD8Q9H461 694 aa18.44■□□□□ 0.54
TRAF4-201ENST00000262395 EVPLQ92817 2033 aa18.44■□□□□ 0.54
TRAF4-201ENST00000262395 PGK2P07205 417 aa18.43■□□□□ 0.54
TRAF4-201ENST00000262395 TPSB2P20231 275 aa18.43■□□□□ 0.54
TRAF4-201ENST00000262395 MBTD1Q05BQ5 628 aa18.43■□□□□ 0.54
TRAF4-201ENST00000262395 KLF10Q13118 480 aa18.43■□□□□ 0.54
TRAF4-201ENST00000262395 LSAMPQ13449 338 aa18.43■□□□□ 0.54
TRAF4-201ENST00000262395 TPSAB1Q15661 275 aa18.43■□□□□ 0.54
TRAF4-201ENST00000262395 SLC10A6Q3KNW5 377 aa18.43■□□□□ 0.54
TRAF4-201ENST00000262395 ANKRD20A4Q4UJ75 823 aa18.43■□□□□ 0.54
TRAF4-201ENST00000262395 IYDQ6PHW0 289 aa18.43■□□□□ 0.54
TRAF4-201ENST00000262395 UGT2A3Q6UWM9 527 aa18.43■□□□□ 0.54
TRAF4-201ENST00000262395 LCLAT1Q6UWP7 414 aa18.43■□□□□ 0.54
TRAF4-201ENST00000262395 HTR3CQ8WXA8 447 aa18.43■□□□□ 0.54
TRAF4-201ENST00000262395 ARNTL2Q8WYA1 636 aa18.43■□□□□ 0.54
TRAF4-201ENST00000262395 MRPL45Q9BRJ2 306 aaKnown RBP18.43■□□□□ 0.54
TRAF4-201ENST00000262395 NT5C1AQ9BXI3 368 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms