RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 NAP1L1P55209 391 aaKnown RBP13.9□□□□□ -0.18
SGCA-201ENST00000262018 YWHAEP62258 255 aaKnown RBP13.9□□□□□ -0.18
SGCA-201ENST00000262018 WHAMMP3Q1A5X7 153 aa13.9□□□□□ -0.18
SGCA-201ENST00000262018 HSF5Q4G112 596 aaPredicted RBP13.9□□□□□ -0.18
SGCA-201ENST00000262018 SDHAF4Q5VUM1 108 aa13.9□□□□□ -0.18
SGCA-201ENST00000262018 TMEM270Q6UE05 265 aa13.9□□□□□ -0.18
SGCA-201ENST00000262018 LRRTM3Q86VH5 581 aa13.9□□□□□ -0.18
SGCA-201ENST00000262018 SLC41A1Q8IVJ1 513 aa13.9□□□□□ -0.18
SGCA-201ENST00000262018 RBBP8NLQ8NC74 664 aaPredicted RBP13.9□□□□□ -0.18
SGCA-201ENST00000262018 CTNNBL1Q8WYA6 563 aaPredicted RBP13.9□□□□□ -0.18
SGCA-201ENST00000262018 RFFLQ8WZ73 363 aa13.9□□□□□ -0.18
SGCA-201ENST00000262018 HSPA12BQ96MM6 686 aa13.9□□□□□ -0.18
SGCA-201ENST00000262018 PRORYQ9H606 182 aa13.9□□□□□ -0.18
SGCA-201ENST00000262018 SAR1BQ9Y6B6 198 aa13.9□□□□□ -0.18
SGCA-201ENST00000262018 PLXND1Q9Y4D7 1925 aa13.9□□□□□ -0.18
SGCA-201ENST00000262018 CEP192Q8TEP8 1941 aa13.9□□□□□ -0.18
SGCA-201ENST00000262018 GRID2IPA4D2P6 1211 aa13.9□□□□□ -0.19
SGCA-201ENST00000262018 FAM149AA5PLN7 773 aa13.9□□□□□ -0.19
SGCA-201ENST00000262018 KPNA7A9QM74 516 aa13.9□□□□□ -0.19
SGCA-201ENST00000262018 ADAM23O75077 832 aa13.9□□□□□ -0.19
SGCA-201ENST00000262018 FTLP02792 175 aaPredicted RBP13.9□□□□□ -0.19
SGCA-201ENST00000262018 APODP05090 189 aa13.9□□□□□ -0.19
SGCA-201ENST00000262018 ATXN1LP0C7T5 689 aaKnown RBP13.9□□□□□ -0.19
SGCA-201ENST00000262018 PRLRP16471 622 aa13.9□□□□□ -0.19
SGCA-201ENST00000262018 MESP2Q0VG99 397 aa13.9□□□□□ -0.19
SGCA-201ENST00000262018 CAMK2BQ13554 666 aa13.9□□□□□ -0.19
SGCA-201ENST00000262018 CLEC16AQ2KHT3 1053 aa13.9□□□□□ -0.19
SGCA-201ENST00000262018 GAB4Q2WGN9 574 aa13.9□□□□□ -0.19
SGCA-201ENST00000262018 ZNF667Q5HYK9 610 aa13.9□□□□□ -0.19
SGCA-201ENST00000262018 THEM5Q8N1Q8 247 aa13.9□□□□□ -0.19
SGCA-201ENST00000262018 GALNT15Q8N3T1 639 aa13.9□□□□□ -0.19
SGCA-201ENST00000262018 ARL14EPQ8N8R7 260 aaPredicted RBP13.9□□□□□ -0.19
SGCA-201ENST00000262018 TPCN2Q8NHX9 752 aa13.9□□□□□ -0.19
SGCA-201ENST00000262018 HPDLQ96IR7 371 aa13.9□□□□□ -0.19
SGCA-201ENST00000262018 CALR3Q96L12 384 aaKnown RBP13.9□□□□□ -0.19
SGCA-201ENST00000262018 CARD6Q9BX69 1037 aa13.9□□□□□ -0.19
SGCA-201ENST00000262018 PDCL3Q9H2J4 239 aa13.9□□□□□ -0.19
SGCA-201ENST00000262018 PRDM16Q9HAZ2 1276 aa13.9□□□□□ -0.19
SGCA-201ENST00000262018 CISHQ9NSE2 258 aa13.9□□□□□ -0.19
SGCA-201ENST00000262018 PALMO75781 387 aa13.89□□□□□ -0.19
SGCA-201ENST00000262018 CLSTN1O94985 981 aa13.89□□□□□ -0.19
SGCA-201ENST00000262018 CYP11A1P05108 521 aa13.89□□□□□ -0.19
SGCA-201ENST00000262018 CHRM1P11229 460 aaPredicted RBP13.89□□□□□ -0.19
SGCA-201ENST00000262018 UNGP13051 313 aaPredicted RBP13.89□□□□□ -0.19
SGCA-201ENST00000262018 NOP2P46087 812 aaKnown RBP13.89□□□□□ -0.19
SGCA-201ENST00000262018 HADHBP55084 474 aaKnown RBP13.89□□□□□ -0.19
SGCA-201ENST00000262018 CFHR1Q03591 330 aa13.89□□□□□ -0.19
SGCA-201ENST00000262018 SMARCB1Q12824 385 aa13.89□□□□□ -0.19
SGCA-201ENST00000262018 GRIK2Q13002 908 aa13.89□□□□□ -0.19
SGCA-201ENST00000262018 ACAD10Q6JQN1 1059 aa13.89□□□□□ -0.19
SGCA-201ENST00000262018 TRIM72Q6ZMU5 477 aa13.89□□□□□ -0.19
SGCA-201ENST00000262018 SLFN11Q7Z7L1 901 aa13.89□□□□□ -0.19
SGCA-201ENST00000262018 METTL23Q86XA0 190 aa13.89□□□□□ -0.19
SGCA-201ENST00000262018 PDCD7Q8N8D1 485 aaKnown RBP13.89□□□□□ -0.19
SGCA-201ENST00000262018 CEP112Q8N8E3 955 aa13.89□□□□□ -0.19
SGCA-201ENST00000262018 LRRC57Q8N9N7 239 aa13.89□□□□□ -0.19
SGCA-201ENST00000262018 MNS1Q8NEH6 495 aa13.89□□□□□ -0.19
SGCA-201ENST00000262018 SPATA18Q8TC71 538 aa13.89□□□□□ -0.19
SGCA-201ENST00000262018 ARHGEF26Q96DR7 871 aa13.89□□□□□ -0.19
SGCA-201ENST00000262018 PNKPQ96T60 521 aa13.89□□□□□ -0.19
SGCA-201ENST00000262018 THAP2Q9H0W7 228 aa13.89□□□□□ -0.19
SGCA-201ENST00000262018 FAM124BQ9H5Z6 455 aaPredicted RBP13.89□□□□□ -0.19
SGCA-201ENST00000262018 CYP3A43Q9HB55 503 aa13.89□□□□□ -0.19
SGCA-201ENST00000262018 GDAP2Q9NXN4 497 aa13.89□□□□□ -0.19
SGCA-201ENST00000262018 CALCOCO1Q9P1Z2 691 aa13.89□□□□□ -0.19
SGCA-201ENST00000262018 UXTQ9UBK9 157 aaPredicted RBP13.89□□□□□ -0.19
SGCA-201ENST00000262018 SUSD2Q9UGT4 822 aa13.89□□□□□ -0.19
SGCA-201ENST00000262018 SNX12Q9UMY4 172 aa13.89□□□□□ -0.19
SGCA-201ENST00000262018 PCDHB5Q9Y5E4 795 aa13.89□□□□□ -0.19
SGCA-201ENST00000262018 OBSL1O75147 1896 aa13.88□□□□□ -0.19
SGCA-201ENST00000262018 SPTA1P02549 2419 aa13.88□□□□□ -0.19
SGCA-201ENST00000262018 IGHV1OR15-9A0A0B4J2B8 117 aa13.88□□□□□ -0.19
SGCA-201ENST00000262018 KAT7O95251 611 aa13.88□□□□□ -0.19
SGCA-201ENST00000262018 CYP1A1P04798 512 aaPredicted RBP13.88□□□□□ -0.19
SGCA-201ENST00000262018 CYP17A1P05093 508 aa13.88□□□□□ -0.19
SGCA-201ENST00000262018 GNSP15586 552 aa13.88□□□□□ -0.19
SGCA-201ENST00000262018 GABRG2P18507 467 aa13.88□□□□□ -0.19
SGCA-201ENST00000262018 ABCB4P21439 1286 aa13.88□□□□□ -0.19
SGCA-201ENST00000262018 GNA15P30679 374 aa13.88□□□□□ -0.19
SGCA-201ENST00000262018 KIR2DL1P43626 348 aaPredicted RBP13.88□□□□□ -0.19
SGCA-201ENST00000262018 MEI1Q5TIA1 1274 aa13.88□□□□□ -0.19
SGCA-201ENST00000262018 LRRC69Q6ZNQ3 347 aa13.88□□□□□ -0.19
SGCA-201ENST00000262018 RHOT2Q8IXI1 618 aa13.88□□□□□ -0.19
SGCA-201ENST00000262018 LRRN4CLQ8ND94 238 aa13.88□□□□□ -0.19
SGCA-201ENST00000262018 SLC35G2Q8TBE7 412 aa13.88□□□□□ -0.19
SGCA-201ENST00000262018 FCRL3Q96P31 734 aaPredicted RBP13.88□□□□□ -0.19
SGCA-201ENST00000262018 TLR10Q9BXR5 811 aa13.88□□□□□ -0.19
SGCA-201ENST00000262018 CLMPQ9H6B4 373 aa13.88□□□□□ -0.19
SGCA-201ENST00000262018 TOR4AQ9NXH8 423 aa13.88□□□□□ -0.19
SGCA-201ENST00000262018 DSEQ9UL01 958 aa13.88□□□□□ -0.19
SGCA-201ENST00000262018 HELZP42694 1942 aaKnown RBP13.87□□□□□ -0.19
SGCA-201ENST00000262018 SCN1AP35498 2009 aa13.87□□□□□ -0.19
SGCA-201ENST00000262018 EFCAB8A8MWE9 144 aa13.87□□□□□ -0.19
SGCA-201ENST00000262018 CYB561D2O14569 222 aa13.87□□□□□ -0.19
SGCA-201ENST00000262018 HUS1O60921 280 aa13.87□□□□□ -0.19
SGCA-201ENST00000262018 MTA2O94776 668 aa13.87□□□□□ -0.19
SGCA-201ENST00000262018 CALCAP01258 141 aa13.87□□□□□ -0.19
SGCA-201ENST00000262018 CYP1A2P05177 515 aa13.87□□□□□ -0.19
SGCA-201ENST00000262018 P4HA1P13674 534 aa13.87□□□□□ -0.19
SGCA-201ENST00000262018 TCP1P17987 556 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms