RNA–Protein interactions for RNA: ENST00000261947.4

RNF130-201, Transcript of ring finger protein 130, humanhuman

TSL 1 (best) BASIC

Gene RNF130, Length 1,766 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF130-201ENST00000261947 GREM1O60565 184 aa28.23■■■□□ 2.11
RNF130-201ENST00000261947 EPHB2P29323 1055 aa28.23■■■□□ 2.11
RNF130-201ENST00000261947 RAP1GAP2Q684P5 730 aa28.23■■■□□ 2.11
RNF130-201ENST00000261947 CES5AQ6NT32 575 aa28.23■■■□□ 2.11
RNF130-201ENST00000261947 PABPC5Q96DU9 382 aaKnown RBP28.23■■■□□ 2.11
RNF130-201ENST00000261947 DCLK3Q9C098 648 aa28.23■■■□□ 2.11
RNF130-201ENST00000261947 TDP1Q9NUW8 608 aa28.23■■■□□ 2.11
RNF130-201ENST00000261947 VANGL2Q9ULK5 521 aa28.23■■■□□ 2.11
RNF130-201ENST00000261947 CCL26Q9Y258 94 aa28.23■■■□□ 2.11
RNF130-201ENST00000261947 GOLGA6L10A0A0M3HER8 536 aa28.22■■■□□ 2.11
RNF130-201ENST00000261947 GOLGA6L7A0A1B0GV03 622 aa28.22■■■□□ 2.11
RNF130-201ENST00000261947 APOL1O14791 398 aa28.22■■■□□ 2.11
RNF130-201ENST00000261947 HTR7P34969 479 aa28.22■■■□□ 2.11
RNF130-201ENST00000261947 C2orf54Q08AI8 447 aa28.22■■■□□ 2.11
RNF130-201ENST00000261947 PRELID2Q8N945 189 aa28.22■■■□□ 2.11
RNF130-201ENST00000261947 TTC16Q8NEE8 873 aa28.22■■■□□ 2.11
RNF130-201ENST00000261947 CFAP97Q9P2B7 532 aa28.22■■■□□ 2.11
RNF130-201ENST00000261947 NEU3Q9UQ49 428 aa28.22■■■□□ 2.11
RNF130-201ENST00000261947 DOCK4Q8N1I0 1966 aa28.22■■■□□ 2.11
RNF130-201ENST00000261947 LEFTY2O00292 366 aa28.22■■■□□ 2.11
RNF130-201ENST00000261947 FAM133BQ5BKY9 247 aaKnown RBP28.22■■■□□ 2.11
RNF130-201ENST00000261947 ATAT1Q5SQI0 421 aa28.22■■■□□ 2.11
RNF130-201ENST00000261947 CHSY1Q86X52 802 aa28.22■■■□□ 2.11
RNF130-201ENST00000261947 ZNF683Q8IZ20 524 aa28.22■■■□□ 2.11
RNF130-201ENST00000261947 PLD5Q8N7P1 536 aa28.22■■■□□ 2.11
RNF130-201ENST00000261947 USP13Q92995 863 aaPredicted RBP28.22■■■□□ 2.11
RNF130-201ENST00000261947 ETNK2Q9NVF9 386 aa28.22■■■□□ 2.11
RNF130-201ENST00000261947 STIM2Q9P246 746 aa28.22■■■□□ 2.11
RNF130-201ENST00000261947 R3HDM2Q9Y2K5 976 aaKnown RBP28.22■■■□□ 2.11
RNF130-201ENST00000261947 CCDC188H7C350 402 aa28.21■■■□□ 2.11
RNF130-201ENST00000261947 ERCC2P18074 760 aa28.21■■■□□ 2.11
RNF130-201ENST00000261947 HOXC13P31276 330 aa28.21■■■□□ 2.11
RNF130-201ENST00000261947 RWDD4Q6NW29 188 aaKnown RBP28.21■■■□□ 2.11
RNF130-201ENST00000261947 FBXL22Q6P050 247 aa28.21■■■□□ 2.11
RNF130-201ENST00000261947 LRRC31Q6UY01 552 aa28.21■■■□□ 2.11
RNF130-201ENST00000261947 Q6ZNB5 142 aa28.21■■■□□ 2.11
RNF130-201ENST00000261947 HTR3DQ70Z44 454 aa28.21■■■□□ 2.11
RNF130-201ENST00000261947 SH3RF2Q8TEC5 729 aa28.21■■■□□ 2.11
RNF130-201ENST00000261947 NUP210Q8TEM1 1887 aaPredicted RBP28.21■■■□□ 2.11
RNF130-201ENST00000261947 TBC1D31Q96DN5 1066 aa28.21■■■□□ 2.11
RNF130-201ENST00000261947 PRDM16Q9HAZ2 1276 aa28.21■■■□□ 2.11
RNF130-201ENST00000261947 SAE1Q9UBE0 346 aaPredicted RBP28.21■■■□□ 2.11
RNF130-201ENST00000261947 LSM7Q9UK45 103 aaKnown RBP28.21■■■□□ 2.11
RNF130-201ENST00000261947 SH3BP1Q9Y3L3 701 aa28.21■■■□□ 2.11
RNF130-201ENST00000261947 APOC4-APOC2K7ER74 178 aa28.2■■■□□ 2.11
RNF130-201ENST00000261947 PRAMEF12O95522 483 aa28.2■■■□□ 2.11
RNF130-201ENST00000261947 LATS1O95835 1130 aa28.2■■■□□ 2.11
RNF130-201ENST00000261947 APOC2P02655 101 aa28.2■■■□□ 2.11
RNF130-201ENST00000261947 TACR2P21452 398 aa28.2■■■□□ 2.11
RNF130-201ENST00000261947 ADGRF1Q5T601 910 aa28.2■■■□□ 2.11
RNF130-201ENST00000261947 DDX42Q86XP3 938 aaKnown RBP eCLIP28.2■■■□□ 2.11
RNF130-201ENST00000261947 ARID3BQ8IVW6 561 aaPredicted RBP28.2■■■□□ 2.11
RNF130-201ENST00000261947 NPAS3Q8IXF0 933 aa28.2■■■□□ 2.11
RNF130-201ENST00000261947 ZSCAN18Q8TBC5 510 aaPredicted RBP28.2■■■□□ 2.11
RNF130-201ENST00000261947 C1orf54Q8WWF1 131 aa28.2■■■□□ 2.11
RNF130-201ENST00000261947 HAUS1Q96CS2 278 aa28.2■■■□□ 2.11
RNF130-201ENST00000261947 MSLNLQ96KJ4 702 aa28.2■■■□□ 2.11
RNF130-201ENST00000261947 STOML2Q9UJZ1 356 aa28.2■■■□□ 2.11
RNF130-201ENST00000261947 SCAMP3O14828 347 aaKnown RBP28.19■■■□□ 2.1
RNF130-201ENST00000261947 DCLK1O15075 740 aa28.19■■■□□ 2.1
RNF130-201ENST00000261947 ZFXP17010 805 aaPredicted RBP28.19■■■□□ 2.1
RNF130-201ENST00000261947 SLC6A4P31645 630 aa28.19■■■□□ 2.1
RNF130-201ENST00000261947 NCBP2-AS2Q69YL0 99 aa28.19■■■□□ 2.1
RNF130-201ENST00000261947 GET4Q7L5D6 327 aaPredicted RBP28.19■■■□□ 2.1
RNF130-201ENST00000261947 TTC13Q8NBP0 860 aa28.19■■■□□ 2.1
RNF130-201ENST00000261947 FGF13Q92913 245 aa28.19■■■□□ 2.1
RNF130-201ENST00000261947 PPARGC1AQ9UBK2 798 aaKnown RBP28.19■■■□□ 2.1
RNF130-201ENST00000261947 MFHAS1Q9Y4C4 1052 aa28.19■■■□□ 2.1
RNF130-201ENST00000261947 BRWD1Q9NSI6 2320 aa28.19■■■□□ 2.1
RNF130-201ENST00000261947 IGLV3-10A0A075B6K4 115 aa28.19■■■□□ 2.1
RNF130-201ENST00000261947 TGM2P21980 687 aa28.19■■■□□ 2.1
RNF130-201ENST00000261947 CYP1B1Q16678 543 aa28.19■■■□□ 2.1
RNF130-201ENST00000261947 RFWD3Q6PCD5 774 aa28.19■■■□□ 2.1
RNF130-201ENST00000261947 ATG4AQ8WYN0 398 aa28.19■■■□□ 2.1
RNF130-201ENST00000261947 FAM118BQ9BPY3 351 aa28.19■■■□□ 2.1
RNF130-201ENST00000261947 DDX47Q9H0S4 455 aaKnown RBP28.19■■■□□ 2.1
RNF130-201ENST00000261947 MPP6Q9NZW5 540 aa28.19■■■□□ 2.1
RNF130-201ENST00000261947 F5H5T6 163 aa28.18■■■□□ 2.1
RNF130-201ENST00000261947 PECAM1P16284 738 aaPredicted RBP28.18■■■□□ 2.1
RNF130-201ENST00000261947 C1orf228Q6PIY5 440 aa28.18■■■□□ 2.1
RNF130-201ENST00000261947 NPNTQ6UXI9 565 aa28.18■■■□□ 2.1
RNF130-201ENST00000261947 Q7L0L9 218 aa28.18■■■□□ 2.1
RNF130-201ENST00000261947 NOA1Q8NC60 698 aaKnown RBP28.18■■■□□ 2.1
RNF130-201ENST00000261947 ACTL9Q8TC94 416 aa28.18■■■□□ 2.1
RNF130-201ENST00000261947 P3H4Q92791 437 aa28.18■■■□□ 2.1
RNF130-201ENST00000261947 IGSF8Q969P0 613 aa28.18■■■□□ 2.1
RNF130-201ENST00000261947 CATSPERBQ9H7T0 1116 aa28.18■■■□□ 2.1
RNF130-201ENST00000261947 HOMER3Q9NSC5 361 aa28.18■■■□□ 2.1
RNF130-201ENST00000261947 ZNF510Q9Y2H8 683 aa28.18■■■□□ 2.1
RNF130-201ENST00000261947 C5orf42Q9H799 3197 aa28.18■■■□□ 2.1
RNF130-201ENST00000261947 FGF10O15520 208 aaPredicted RBP28.17■■■□□ 2.1
RNF130-201ENST00000261947 PHF2O75151 1096 aa28.17■■■□□ 2.1
RNF130-201ENST00000261947 WEE1P30291 646 aa28.17■■■□□ 2.1
RNF130-201ENST00000261947 OTUD4Q01804 1114 aaKnown RBP28.17■■■□□ 2.1
RNF130-201ENST00000261947 CCNG2Q16589 344 aa28.17■■■□□ 2.1
RNF130-201ENST00000261947 GPR153Q6NV75 609 aa28.17■■■□□ 2.1
RNF130-201ENST00000261947 TMCO3Q6UWJ1 677 aa28.17■■■□□ 2.1
RNF130-201ENST00000261947 LGI2Q8N0V4 545 aa28.17■■■□□ 2.1
RNF130-201ENST00000261947 RIN3Q8TB24 985 aa28.17■■■□□ 2.1
RNF130-201ENST00000261947 MYLIPQ8WY64 445 aa28.17■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms