RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 LRRC38Q5VT99 294 aa13.36□□□□□ -0.27
SNX1-201ENST00000261889 ZNF280DQ6N043 979 aa13.36□□□□□ -0.27
SNX1-201ENST00000261889 CYP2R1Q6VVX0 501 aa13.36□□□□□ -0.27
SNX1-201ENST00000261889 PCDH20Q8N6Y1 951 aaKnown RBP13.36□□□□□ -0.27
SNX1-201ENST00000261889 CCDC185Q8N715 623 aa13.36□□□□□ -0.27
SNX1-201ENST00000261889 CENPKQ9BS16 269 aa13.36□□□□□ -0.27
SNX1-201ENST00000261889 COG4Q9H9E3 785 aa13.36□□□□□ -0.27
SNX1-201ENST00000261889 KIAA1217Q5T5P2 1943 aa13.36□□□□□ -0.27
SNX1-201ENST00000261889 TK2O00142 265 aa13.35□□□□□ -0.27
SNX1-201ENST00000261889 DNAJA2O60884 412 aa13.35□□□□□ -0.27
SNX1-201ENST00000261889 ATG7O95352 703 aa13.35□□□□□ -0.27
SNX1-201ENST00000261889 HSPA4LO95757 839 aa13.35□□□□□ -0.27
SNX1-201ENST00000261889 VTNP04004 478 aa13.35□□□□□ -0.27
SNX1-201ENST00000261889 PTPN1P18031 435 aaKnown RBP13.35□□□□□ -0.27
SNX1-201ENST00000261889 TSPAN8P19075 237 aa13.35□□□□□ -0.27
SNX1-201ENST00000261889 CYP2F1P24903 491 aa13.35□□□□□ -0.27
SNX1-201ENST00000261889 GNL1P36915 607 aaPredicted RBP13.35□□□□□ -0.27
SNX1-201ENST00000261889 STAT5BP51692 787 aa13.35□□□□□ -0.27
SNX1-201ENST00000261889 THOP1P52888 689 aa13.35□□□□□ -0.27
SNX1-201ENST00000261889 NME5P56597 212 aa13.35□□□□□ -0.27
SNX1-201ENST00000261889 CLDN10P78369 228 aa13.35□□□□□ -0.27
SNX1-201ENST00000261889 TUBB3Q13509 450 aa13.35□□□□□ -0.27
SNX1-201ENST00000261889 NADK2Q4G0N4 442 aa13.35□□□□□ -0.27
SNX1-201ENST00000261889 ANGEL2Q5VTE6 544 aaKnown RBP13.35□□□□□ -0.27
SNX1-201ENST00000261889 MBLAC2Q68D91 279 aa13.35□□□□□ -0.27
SNX1-201ENST00000261889 TRPM4Q8TD43 1214 aa13.35□□□□□ -0.27
SNX1-201ENST00000261889 FAM149B1Q96BN6 582 aa13.35□□□□□ -0.27
SNX1-201ENST00000261889 SIGLEC10Q96LC7 697 aa13.35□□□□□ -0.27
SNX1-201ENST00000261889 PCDH18Q9HCL0 1135 aa13.35□□□□□ -0.27
SNX1-201ENST00000261889 SYBUQ9NX95 663 aa13.35□□□□□ -0.27
SNX1-201ENST00000261889 DTNAQ9Y4J8 743 aa13.35□□□□□ -0.27
SNX1-201ENST00000261889 LOC285556D6RIA3 1793 aa13.35□□□□□ -0.27
SNX1-201ENST00000261889 MKI67P46013 3256 aaKnown RBP13.35□□□□□ -0.27
SNX1-201ENST00000261889 MAGEC1O60732 1142 aa13.35□□□□□ -0.27
SNX1-201ENST00000261889 PFDN1O60925 122 aa13.35□□□□□ -0.27
SNX1-201ENST00000261889 SERPINA6P08185 405 aa13.35□□□□□ -0.27
SNX1-201ENST00000261889 EIF4BP23588 611 aaKnown RBP13.35□□□□□ -0.27
SNX1-201ENST00000261889 NAMPTP43490 491 aa13.35□□□□□ -0.27
SNX1-201ENST00000261889 CDKL1Q00532 357 aa13.35□□□□□ -0.27
SNX1-201ENST00000261889 ITGA7Q13683 1181 aa13.35□□□□□ -0.27
SNX1-201ENST00000261889 CNGA3Q16281 694 aa13.35□□□□□ -0.27
SNX1-201ENST00000261889 GOLGA7BQ2TAP0 167 aa13.35□□□□□ -0.27
SNX1-201ENST00000261889 PPP1R26Q5T8A7 1209 aaPredicted RBP13.35□□□□□ -0.27
SNX1-201ENST00000261889 TMC7Q7Z402 723 aa13.35□□□□□ -0.27
SNX1-201ENST00000261889 TTC13Q8NBP0 860 aa13.35□□□□□ -0.27
SNX1-201ENST00000261889 CMASQ8NFW8 434 aaPredicted RBP13.35□□□□□ -0.27
SNX1-201ENST00000261889 DIS3LQ8TF46 1054 aaKnown RBP13.35□□□□□ -0.27
SNX1-201ENST00000261889 PPP2R3CQ969Q6 453 aa13.35□□□□□ -0.27
SNX1-201ENST00000261889 SORT1Q99523 831 aa13.35□□□□□ -0.27
SNX1-201ENST00000261889 NPAS2Q99743 824 aa13.35□□□□□ -0.27
SNX1-201ENST00000261889 PCDHAC1Q9H158 963 aa13.35□□□□□ -0.27
SNX1-201ENST00000261889 DPEP3Q9H4B8 488 aa13.35□□□□□ -0.27
SNX1-201ENST00000261889 RSAD1Q9HA92 442 aa13.35□□□□□ -0.27
SNX1-201ENST00000261889 CROCCQ5TZA2 2017 aa13.35□□□□□ -0.27
SNX1-201ENST00000261889 NUP205Q92621 2012 aa13.35□□□□□ -0.27
SNX1-201ENST00000261889 NFASCO94856 1347 aa13.35□□□□□ -0.27
SNX1-201ENST00000261889 A8MXQ7 604 aa13.35□□□□□ -0.27
SNX1-201ENST00000261889 DDNO94850 711 aaPredicted RBP13.35□□□□□ -0.27
SNX1-201ENST00000261889 TFPTP0C1Z6 253 aa13.35□□□□□ -0.27
SNX1-201ENST00000261889 MS4A2Q01362 244 aa13.35□□□□□ -0.27
SNX1-201ENST00000261889 RALGDSQ12967 914 aa13.35□□□□□ -0.27
SNX1-201ENST00000261889 OPTNQ96CV9 577 aa13.35□□□□□ -0.27
SNX1-201ENST00000261889 DHX33Q9H6R0 707 aaKnown RBP13.35□□□□□ -0.27
SNX1-201ENST00000261889 TXNDC16Q9P2K2 825 aa13.35□□□□□ -0.27
SNX1-201ENST00000261889 TRPM7Q96QT4 1865 aa13.35□□□□□ -0.27
SNX1-201ENST00000261889 H3BSA7 217 aa13.34□□□□□ -0.27
SNX1-201ENST00000261889 TPST1O60507 370 aa13.34□□□□□ -0.27
SNX1-201ENST00000261889 SEC24DO94855 1032 aaPredicted RBP13.34□□□□□ -0.27
SNX1-201ENST00000261889 ARIH2O95376 493 aa13.34□□□□□ -0.27
SNX1-201ENST00000261889 GSTA2P09210 222 aa13.34□□□□□ -0.27
SNX1-201ENST00000261889 PSMB4P28070 264 aa13.34□□□□□ -0.27
SNX1-201ENST00000261889 CRABP2P29373 138 aa13.34□□□□□ -0.27
SNX1-201ENST00000261889 GPD2P43304 727 aa13.34□□□□□ -0.27
SNX1-201ENST00000261889 SLFN12LQ6IEE8 588 aa13.34□□□□□ -0.27
SNX1-201ENST00000261889 NCAPG2Q86XI2 1143 aa13.34□□□□□ -0.27
SNX1-201ENST00000261889 ICA1LQ8NDH6 482 aa13.34□□□□□ -0.27
SNX1-201ENST00000261889 ATP2A3Q93084 1043 aa13.34□□□□□ -0.27
SNX1-201ENST00000261889 RCN3Q96D15 328 aa13.34□□□□□ -0.27
SNX1-201ENST00000261889 C7orf26Q96N11 449 aa13.34□□□□□ -0.27
SNX1-201ENST00000261889 THAP1Q9NVV9 213 aa13.34□□□□□ -0.27
SNX1-201ENST00000261889 ZNF214Q9UL59 606 aaPredicted RBP13.34□□□□□ -0.27
SNX1-201ENST00000261889 LZTS1Q9Y250 596 aa13.34□□□□□ -0.27
SNX1-201ENST00000261889 TGDSO95455 350 aa13.34□□□□□ -0.27
SNX1-201ENST00000261889 CCDC130P13994 396 aa13.34□□□□□ -0.27
SNX1-201ENST00000261889 UQCRBP14927 111 aa13.34□□□□□ -0.27
SNX1-201ENST00000261889 ARL2P36404 184 aa13.34□□□□□ -0.27
SNX1-201ENST00000261889 ALDH1A3P47895 512 aa13.34□□□□□ -0.27
SNX1-201ENST00000261889 SNRPFP62306 86 aaKnown RBP13.34□□□□□ -0.27
SNX1-201ENST00000261889 PRAMEP78395 509 aa13.34□□□□□ -0.27
SNX1-201ENST00000261889 STILQ15468 1287 aa13.34□□□□□ -0.27
SNX1-201ENST00000261889 DNAL1Q4LDG9 190 aa13.34□□□□□ -0.27
SNX1-201ENST00000261889 HSP90AA5PQ58FG0 334 aa13.34□□□□□ -0.27
SNX1-201ENST00000261889 ZNF280CQ8ND82 737 aa13.34□□□□□ -0.27
SNX1-201ENST00000261889 KHSRPQ92945 711 aaKnown RBP eCLIP13.34□□□□□ -0.277e-7■□□□□ 11.1
SNX1-201ENST00000261889 DCUN1D1Q96GG9 259 aa13.34□□□□□ -0.27
SNX1-201ENST00000261889 ANKRD36BP1Q96IX9 119 aa13.34□□□□□ -0.27
SNX1-201ENST00000261889 TRAPPC9Q96Q05 1148 aa13.34□□□□□ -0.27
SNX1-201ENST00000261889 ACO2Q99798 780 aaKnown RBP13.34□□□□□ -0.27
SNX1-201ENST00000261889 SLC39A3Q9BRY0 314 aa13.34□□□□□ -0.27
SNX1-201ENST00000261889 SSX2IPQ9Y2D8 614 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms