RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 SENP7Q9BQF6 1050 aa12.15□□□□□ -0.46
CCNA1-201ENST00000255465 MAGEE1Q9HCI5 957 aa12.15□□□□□ -0.46
CCNA1-201ENST00000255465 KIAA1586Q9HCI6 787 aa12.15□□□□□ -0.46
CCNA1-201ENST00000255465 XPNPEP3Q9NQH7 507 aa12.15□□□□□ -0.46
CCNA1-201ENST00000255465 SH3GLB2Q9NR46 395 aa12.15□□□□□ -0.46
CCNA1-201ENST00000255465 NDFIP2Q9NV92 336 aa12.15□□□□□ -0.46
CCNA1-201ENST00000255465 RBMX2Q9Y388 322 aaKnown RBP12.15□□□□□ -0.46
CCNA1-201ENST00000255465 PCDHGA3Q9Y5H0 932 aa12.15□□□□□ -0.46
CCNA1-201ENST00000255465 AP4B1Q9Y6B7 739 aa12.15□□□□□ -0.46
CCNA1-201ENST00000255465 ALPK3Q96L96 1907 aa12.15□□□□□ -0.46
CCNA1-201ENST00000255465 CAPN14A8MX76 684 aa12.14□□□□□ -0.47
CCNA1-201ENST00000255465 USP1O94782 785 aa12.14□□□□□ -0.47
CCNA1-201ENST00000255465 MYO1DO94832 1006 aa12.14□□□□□ -0.47
CCNA1-201ENST00000255465 KRT3P12035 628 aa12.14□□□□□ -0.47
CCNA1-201ENST00000255465 SMPD1P17405 629 aa12.14□□□□□ -0.47
CCNA1-201ENST00000255465 ACAT1P24752 427 aaKnown RBP12.14□□□□□ -0.47
CCNA1-201ENST00000255465 CCND2P30279 289 aa12.14□□□□□ -0.47
CCNA1-201ENST00000255465 PTGS2P35354 604 aa12.14□□□□□ -0.47
CCNA1-201ENST00000255465 ALDH1A3P47895 512 aa12.14□□□□□ -0.47
CCNA1-201ENST00000255465 CLK1P49759 484 aaKnown RBP12.14□□□□□ -0.47
CCNA1-201ENST00000255465 MLLT6P55198 1093 aaPredicted RBP12.14□□□□□ -0.47
CCNA1-201ENST00000255465 RAD51Q06609 339 aa12.14□□□□□ -0.47
CCNA1-201ENST00000255465 STX3Q13277 289 aa12.14□□□□□ -0.47
CCNA1-201ENST00000255465 SELPLGQ14242 412 aa12.14□□□□□ -0.47
CCNA1-201ENST00000255465 NFE2L1Q14494 772 aa12.14□□□□□ -0.47
CCNA1-201ENST00000255465 TRABD2AQ86V40 505 aa12.14□□□□□ -0.47
CCNA1-201ENST00000255465 IFNLR1Q8IU57 520 aaPredicted RBP12.14□□□□□ -0.47
CCNA1-201ENST00000255465 KIAA2013Q8IYS2 634 aa12.14□□□□□ -0.47
CCNA1-201ENST00000255465 ELMOD2Q8IZ81 293 aa12.14□□□□□ -0.47
CCNA1-201ENST00000255465 ARRDC4Q8NCT1 418 aa12.14□□□□□ -0.47
CCNA1-201ENST00000255465 SLC2A14Q8TDB8 520 aa12.14□□□□□ -0.47
CCNA1-201ENST00000255465 HELQQ8TDG4 1101 aa12.14□□□□□ -0.47
CCNA1-201ENST00000255465 GLMNQ92990 594 aa12.14□□□□□ -0.47
CCNA1-201ENST00000255465 METTL2AQ96IZ6 378 aaKnown RBP12.14□□□□□ -0.47
CCNA1-201ENST00000255465 SNX18Q96RF0 628 aa12.14□□□□□ -0.47
CCNA1-201ENST00000255465 WDR11Q9BZH6 1224 aa12.14□□□□□ -0.47
CCNA1-201ENST00000255465 VPS11Q9H270 941 aa12.14□□□□□ -0.47
CCNA1-201ENST00000255465 BLZF1Q9H2G9 400 aa12.14□□□□□ -0.47
CCNA1-201ENST00000255465 SYTL2Q9HCH5 934 aa12.14□□□□□ -0.47
CCNA1-201ENST00000255465 C6orf50Q9HD87 102 aa12.14□□□□□ -0.47
CCNA1-201ENST00000255465 C8orf4Q9NR00 106 aa12.14□□□□□ -0.47
CCNA1-201ENST00000255465 ARHGEF4Q9NR80 690 aa12.14□□□□□ -0.47
CCNA1-201ENST00000255465 KANSL3Q9P2N6 904 aa12.14□□□□□ -0.47
CCNA1-201ENST00000255465 VPS51Q9UID3 782 aa12.14□□□□□ -0.47
CCNA1-201ENST00000255465 POU2F3Q9UKI9 436 aa12.14□□□□□ -0.47
CCNA1-201ENST00000255465 ADAMTS6Q9UKP5 1117 aa12.14□□□□□ -0.47
CCNA1-201ENST00000255465 PCDHA6Q9UN73 950 aa12.14□□□□□ -0.47
CCNA1-201ENST00000255465 PSMD13Q9UNM6 376 aa12.14□□□□□ -0.47
CCNA1-201ENST00000255465 NAALADL1Q9UQQ1 740 aa12.14□□□□□ -0.47
CCNA1-201ENST00000255465 GNEQ9Y223 722 aaKnown RBP12.14□□□□□ -0.47
CCNA1-201ENST00000255465 PCDHA8Q9Y5H6 950 aa12.14□□□□□ -0.47
CCNA1-201ENST00000255465 GOLGA8IPA6NC78 632 aa12.14□□□□□ -0.47
CCNA1-201ENST00000255465 PSMD12O00232 456 aaPredicted RBP12.14□□□□□ -0.47
CCNA1-201ENST00000255465 ADAMTS3O15072 1205 aa12.14□□□□□ -0.47
CCNA1-201ENST00000255465 ATMINO43313 823 aaPredicted RBP12.14□□□□□ -0.47
CCNA1-201ENST00000255465 H6PDO95479 791 aa12.14□□□□□ -0.47
CCNA1-201ENST00000255465 PGK1P00558 417 aa12.14□□□□□ -0.47
CCNA1-201ENST00000255465 PRKACAP17612 351 aa12.14□□□□□ -0.47
CCNA1-201ENST00000255465 ITIH2P19823 946 aa12.14□□□□□ -0.47
CCNA1-201ENST00000255465 CIITAP33076 1130 aa12.14□□□□□ -0.47
CCNA1-201ENST00000255465 CLK2P49760 499 aaKnown RBP12.14□□□□□ -0.47
CCNA1-201ENST00000255465 CASP5P51878 434 aa12.14□□□□□ -0.47
CCNA1-201ENST00000255465 TXNL4AP83876 142 aaKnown RBP12.14□□□□□ -0.47
CCNA1-201ENST00000255465 OCA2Q04671 838 aa12.14□□□□□ -0.47
CCNA1-201ENST00000255465 BTKQ06187 659 aa12.14□□□□□ -0.47
CCNA1-201ENST00000255465 ZNF846Q147U1 533 aa12.14□□□□□ -0.47
CCNA1-201ENST00000255465 EFTUD2Q15029 972 aaKnown RBP eCLIP12.14□□□□□ -0.47
CCNA1-201ENST00000255465 ITPRIPL1Q6GPH6 555 aa12.14□□□□□ -0.47
CCNA1-201ENST00000255465 OGFOD2Q6N063 350 aa12.14□□□□□ -0.47
CCNA1-201ENST00000255465 ZFP1Q6P2D0 407 aa12.14□□□□□ -0.47
CCNA1-201ENST00000255465 TAS2R42Q7RTR8 314 aa12.14□□□□□ -0.47
CCNA1-201ENST00000255465 SRRM1Q8IYB3 904 aaKnown RBP12.14□□□□□ -0.47
CCNA1-201ENST00000255465 GSDMBQ8TAX9 411 aa12.14□□□□□ -0.47
CCNA1-201ENST00000255465 PSPC1Q8WXF1 523 aaKnown RBP12.14□□□□□ -0.47
CCNA1-201ENST00000255465 PAWRQ96IZ0 340 aaKnown RBP12.14□□□□□ -0.47
CCNA1-201ENST00000255465 LPIN3Q9BQK8 851 aa12.14□□□□□ -0.47
CCNA1-201ENST00000255465 CALN1Q9BXU9 219 aa12.14□□□□□ -0.47
CCNA1-201ENST00000255465 SCPEP1Q9HB40 452 aa12.14□□□□□ -0.47
CCNA1-201ENST00000255465 MLXIPLQ9NP71 852 aa12.14□□□□□ -0.47
CCNA1-201ENST00000255465 NPHS2Q9NP85 383 aa12.14□□□□□ -0.47
CCNA1-201ENST00000255465 BCAP29Q9UHQ4 241 aa12.14□□□□□ -0.47
CCNA1-201ENST00000255465 DAPK2Q9UIK4 370 aa12.14□□□□□ -0.47
CCNA1-201ENST00000255465 MSI1O43347 362 aaKnown RBP12.13□□□□□ -0.47
CCNA1-201ENST00000255465 KLRC4O43908 158 aa12.13□□□□□ -0.47
CCNA1-201ENST00000255465 ADAMTS4O75173 837 aa12.13□□□□□ -0.47
CCNA1-201ENST00000255465 RGS20O76081 388 aa12.13□□□□□ -0.47
CCNA1-201ENST00000255465 FOSP01100 380 aaPredicted RBP12.13□□□□□ -0.47
CCNA1-201ENST00000255465 CTNNA2P26232 953 aa12.13□□□□□ -0.47
CCNA1-201ENST00000255465 MAN1A1P33908 653 aa12.13□□□□□ -0.47
CCNA1-201ENST00000255465 BMXP51813 675 aa12.13□□□□□ -0.47
CCNA1-201ENST00000255465 AP2S1P53680 142 aaPredicted RBP12.13□□□□□ -0.47
CCNA1-201ENST00000255465 MRPS9P82933 396 aaKnown RBP12.13□□□□□ -0.47
CCNA1-201ENST00000255465 LRRC41Q15345 812 aa12.13□□□□□ -0.47
CCNA1-201ENST00000255465 ASIC2Q16515 512 aa12.13□□□□□ -0.47
CCNA1-201ENST00000255465 GRAMD1BQ3KR37 738 aa12.13□□□□□ -0.47
CCNA1-201ENST00000255465 DUSP28Q4G0W2 176 aa12.13□□□□□ -0.47
CCNA1-201ENST00000255465 LPCAT4Q643R3 524 aa12.13□□□□□ -0.47
CCNA1-201ENST00000255465 TICAM1Q8IUC6 712 aa12.13□□□□□ -0.47
CCNA1-201ENST00000255465 KBTBD7Q8WVZ9 684 aa12.13□□□□□ -0.47
CCNA1-201ENST00000255465 C12orf43Q96C57 262 aaKnown RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms