RNA–Protein interactions for RNA: ENST00000254810.8

H3F3B-201, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3B, Length 2,705 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-201ENST00000254810 MYBPC1Q00872 1141 aa13.77□□□□□ -0.2
H3F3B-201ENST00000254810 R3HDM1Q15032 1099 aaKnown RBP13.77□□□□□ -0.2
H3F3B-201ENST00000254810 PDK2Q15119 407 aa13.77□□□□□ -0.2
H3F3B-201ENST00000254810 MEX3CQ5U5Q3 659 aaKnown RBP13.77□□□□□ -0.2
H3F3B-201ENST00000254810 ATF7IP2Q5U623 682 aa13.77□□□□□ -0.2
H3F3B-201ENST00000254810 KLHDC10Q6PID8 442 aa13.77□□□□□ -0.2
H3F3B-201ENST00000254810 SCUBE3Q8IX30 993 aa13.77□□□□□ -0.2
H3F3B-201ENST00000254810 LILRA2Q8N149 483 aa13.77□□□□□ -0.2
H3F3B-201ENST00000254810 PQLC1Q8N2U9 271 aa13.77□□□□□ -0.2
H3F3B-201ENST00000254810 MTMR14Q8NCE2 650 aa13.77□□□□□ -0.2
H3F3B-201ENST00000254810 CMTM5Q96DZ9 223 aa13.77□□□□□ -0.2
H3F3B-201ENST00000254810 DTNBP1Q96EV8 351 aa13.77□□□□□ -0.2
H3F3B-201ENST00000254810 LPIN3Q9BQK8 851 aa13.77□□□□□ -0.2
H3F3B-201ENST00000254810 GRIP2Q9C0E4 1043 aa13.77□□□□□ -0.2
H3F3B-201ENST00000254810 CDT1Q9H211 546 aa13.77□□□□□ -0.2
H3F3B-201ENST00000254810 STN1Q9H668 368 aaKnown RBP13.77□□□□□ -0.2
H3F3B-201ENST00000254810 APPL1Q9UKG1 709 aa13.77□□□□□ -0.2
H3F3B-201ENST00000254810 BPTFQ12830 3046 aa13.77□□□□□ -0.2
H3F3B-201ENST00000254810 SMIM31A0A1B0GVY4 71 aa13.77□□□□□ -0.21
H3F3B-201ENST00000254810 ATP9BO43861 1147 aa13.77□□□□□ -0.21
H3F3B-201ENST00000254810 CRTAMO95727 393 aa13.77□□□□□ -0.21
H3F3B-201ENST00000254810 AMHP03971 560 aa13.77□□□□□ -0.21
H3F3B-201ENST00000254810 ATP6V1B1P15313 513 aa13.77□□□□□ -0.21
H3F3B-201ENST00000254810 SERPINB5P36952 375 aa13.77□□□□□ -0.21
H3F3B-201ENST00000254810 EFNA5P52803 228 aa13.77□□□□□ -0.21
H3F3B-201ENST00000254810 NDST1P52848 882 aa13.77□□□□□ -0.21
H3F3B-201ENST00000254810 PGGT1BP53609 377 aa13.77□□□□□ -0.21
H3F3B-201ENST00000254810 BACE1P56817 501 aa13.77□□□□□ -0.21
H3F3B-201ENST00000254810 MYLK3Q32MK0 819 aa13.77□□□□□ -0.21
H3F3B-201ENST00000254810 STXBP5Q5T5C0 1151 aa13.77□□□□□ -0.21
H3F3B-201ENST00000254810 OLFML1Q6UWY5 402 aa13.77□□□□□ -0.21
H3F3B-201ENST00000254810 TSHZ1Q6ZSZ6 1077 aa13.77□□□□□ -0.21
H3F3B-201ENST00000254810 SDCCAG8Q86SQ7 713 aaPredicted RBP13.77□□□□□ -0.21
H3F3B-201ENST00000254810 MAP7D3Q8IWC1 876 aa13.77□□□□□ -0.21
H3F3B-201ENST00000254810 HACE1Q8IYU2 909 aa13.77□□□□□ -0.21
H3F3B-201ENST00000254810 MARVELD2Q8N4S9 558 aa13.77□□□□□ -0.21
H3F3B-201ENST00000254810 CLEC4CQ8WTT0 213 aa13.77□□□□□ -0.21
H3F3B-201ENST00000254810 NLRP4Q96MN2 994 aa13.77□□□□□ -0.21
H3F3B-201ENST00000254810 RBM38Q9H0Z9 239 aaKnown RBP13.77□□□□□ -0.21
H3F3B-201ENST00000254810 DDX18Q9NVP1 670 aaKnown RBP13.77□□□□□ -0.21
H3F3B-201ENST00000254810 LZTS1Q9Y250 596 aa13.77□□□□□ -0.21
H3F3B-201ENST00000254810 HES2Q9Y543 173 aa13.77□□□□□ -0.21
H3F3B-201ENST00000254810 hCG_2014768A0A024R1R8 64 aa13.77□□□□□ -0.21
H3F3B-201ENST00000254810 PDLIM1O00151 329 aa13.77□□□□□ -0.21
H3F3B-201ENST00000254810 AIM2O14862 343 aa13.77□□□□□ -0.21
H3F3B-201ENST00000254810 PEX1O43933 1283 aa13.77□□□□□ -0.21
H3F3B-201ENST00000254810 XRCC1P18887 633 aaPredicted RBP13.77□□□□□ -0.21
H3F3B-201ENST00000254810 PCSK6P29122 969 aa13.77□□□□□ -0.21
H3F3B-201ENST00000254810 MLH1P40692 756 aa13.77□□□□□ -0.21
H3F3B-201ENST00000254810 MRPS22P82650 360 aaKnown RBP13.77□□□□□ -0.21
H3F3B-201ENST00000254810 CDKL1Q00532 357 aa13.77□□□□□ -0.21
H3F3B-201ENST00000254810 DEUP1Q05D60 604 aa13.77□□□□□ -0.21
H3F3B-201ENST00000254810 SEMA5AQ13591 1074 aa13.77□□□□□ -0.21
H3F3B-201ENST00000254810 EPGNQ6UW88 154 aa13.77□□□□□ -0.21
H3F3B-201ENST00000254810 PYROXD2Q8N2H3 581 aa13.77□□□□□ -0.21
H3F3B-201ENST00000254810 RNF148Q8N7C7 305 aa13.77□□□□□ -0.21
H3F3B-201ENST00000254810 PPP4R1Q8TF05 950 aa13.77□□□□□ -0.21
H3F3B-201ENST00000254810 BTBD9Q96Q07 612 aa13.77□□□□□ -0.21
H3F3B-201ENST00000254810 LGMNQ99538 433 aa13.77□□□□□ -0.21
H3F3B-201ENST00000254810 WDR55Q9H6Y2 383 aaPredicted RBP13.77□□□□□ -0.21
H3F3B-201ENST00000254810 ACAD9Q9H845 621 aa13.77□□□□□ -0.21
H3F3B-201ENST00000254810 PHIPQ8WWQ0 1821 aa13.76□□□□□ -0.21
H3F3B-201ENST00000254810 DENRO43583 198 aaKnown RBP13.76□□□□□ -0.21
H3F3B-201ENST00000254810 THOP1P52888 689 aa13.76□□□□□ -0.21
H3F3B-201ENST00000254810 IRF9Q00978 393 aa13.76□□□□□ -0.21
H3F3B-201ENST00000254810 DLG2Q15700 870 aa13.76□□□□□ -0.21
H3F3B-201ENST00000254810 STXBP2Q15833 593 aa13.76□□□□□ -0.21
H3F3B-201ENST00000254810 BOLA3Q53S33 107 aa13.76□□□□□ -0.21
H3F3B-201ENST00000254810 MAP3K21Q5TCX8 1036 aa13.76□□□□□ -0.21
H3F3B-201ENST00000254810 EEPD1Q7L9B9 569 aa13.76□□□□□ -0.21
H3F3B-201ENST00000254810 CDKL3Q8IVW4 592 aaPredicted RBP13.76□□□□□ -0.21
H3F3B-201ENST00000254810 ZFP28Q8NHY6 868 aa13.76□□□□□ -0.21
H3F3B-201ENST00000254810 DGCR14Q96DF8 476 aaKnown RBP13.76□□□□□ -0.21
H3F3B-201ENST00000254810 CNBD2Q96M20 576 aa13.76□□□□□ -0.21
H3F3B-201ENST00000254810 EPB41L1Q9H4G0 881 aa13.76□□□□□ -0.21
H3F3B-201ENST00000254810 MYOZ2Q9NPC6 264 aa13.76□□□□□ -0.21
H3F3B-201ENST00000254810 SYBUQ9NX95 663 aa13.76□□□□□ -0.21
H3F3B-201ENST00000254810 ADAMTS5Q9UNA0 930 aa13.76□□□□□ -0.21
H3F3B-201ENST00000254810 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.76□□□□□ -0.21
H3F3B-201ENST00000254810 INO80B-WBP1J3KQ70 363 aa13.76□□□□□ -0.21
H3F3B-201ENST00000254810 DGKIO75912 1065 aa13.76□□□□□ -0.21
H3F3B-201ENST00000254810 PENKP01210 267 aaPredicted RBP13.76□□□□□ -0.21
H3F3B-201ENST00000254810 VDRP11473 427 aa13.76□□□□□ -0.21
H3F3B-201ENST00000254810 ICAM3P32942 547 aa13.76□□□□□ -0.21
H3F3B-201ENST00000254810 DPP6P42658 865 aa13.76□□□□□ -0.21
H3F3B-201ENST00000254810 MS4A2Q01362 244 aa13.76□□□□□ -0.21
H3F3B-201ENST00000254810 ITGA7Q13683 1181 aa13.76□□□□□ -0.21
H3F3B-201ENST00000254810 MYBPC3Q14896 1274 aa13.76□□□□□ -0.21
H3F3B-201ENST00000254810 SURF1Q15526 300 aa13.76□□□□□ -0.21
H3F3B-201ENST00000254810 GOLGA7BQ2TAP0 167 aa13.76□□□□□ -0.21
H3F3B-201ENST00000254810 C6orf52Q5T4I8 152 aa13.76□□□□□ -0.21
H3F3B-201ENST00000254810 NBPF12Q5TAG4 269 aaPredicted RBP13.76□□□□□ -0.21
H3F3B-201ENST00000254810 PRAMEF18Q5VWM3 479 aa13.76□□□□□ -0.21
H3F3B-201ENST00000254810 KRT27Q7Z3Y8 459 aa13.76□□□□□ -0.21
H3F3B-201ENST00000254810 ACVR1CQ8NER5 493 aa13.76□□□□□ -0.21
H3F3B-201ENST00000254810 ACMSDQ8TDX5 336 aa13.76□□□□□ -0.21
H3F3B-201ENST00000254810 QKIQ96PU8 341 aaKnown RBP eCLIP13.76□□□□□ -0.21
H3F3B-201ENST00000254810 PHF12Q96QT6 1004 aa13.76□□□□□ -0.21
H3F3B-201ENST00000254810 INO80BQ9C086 356 aaPredicted RBP13.76□□□□□ -0.21
H3F3B-201ENST00000254810 DHX35Q9H5Z1 703 aaKnown RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms