RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 PCDHB18PQ96TA0 734 aa23.78■■□□□ 1.4
LSM4-201ENST00000252816 NPY6RQ99463 290 aa23.78■■□□□ 1.4
LSM4-201ENST00000252816 PRMT1Q99873 361 aaKnown RBP23.78■■□□□ 1.4
LSM4-201ENST00000252816 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP23.78■■□□□ 1.4
LSM4-201ENST00000252816 USP18Q9UMW8 372 aa23.78■■□□□ 1.4
LSM4-201ENST00000252816 ABCA7Q8IZY2 2146 aa23.78■■□□□ 1.4
LSM4-201ENST00000252816 CEP250Q9BV73 2442 aa23.78■■□□□ 1.4
LSM4-201ENST00000252816 GOLGA8SH3BPF8 625 aa23.77■■□□□ 1.4
LSM4-201ENST00000252816 M0QYT0 321 aa23.77■■□□□ 1.4
LSM4-201ENST00000252816 NPC1O15118 1278 aa23.77■■□□□ 1.4
LSM4-201ENST00000252816 EPN2O95208 641 aa23.77■■□□□ 1.4
LSM4-201ENST00000252816 SLC2A3P11169 496 aa23.77■■□□□ 1.4
LSM4-201ENST00000252816 NDUFV2P19404 249 aa23.77■■□□□ 1.4
LSM4-201ENST00000252816 PRKCHP24723 683 aa23.77■■□□□ 1.4
LSM4-201ENST00000252816 ARID5AQ03989 594 aa23.77■■□□□ 1.4
LSM4-201ENST00000252816 TRNP1Q6NT89 227 aa23.77■■□□□ 1.4
LSM4-201ENST00000252816 MFN1Q8IWA4 741 aa23.77■■□□□ 1.4
LSM4-201ENST00000252816 GPR161Q8N6U8 529 aaKnown RBP23.77■■□□□ 1.4
LSM4-201ENST00000252816 FIBINQ8TAL6 211 aa23.77■■□□□ 1.4
LSM4-201ENST00000252816 CYB5D2Q8WUJ1 264 aa23.77■■□□□ 1.4
LSM4-201ENST00000252816 RNF34Q969K3 372 aa23.77■■□□□ 1.4
LSM4-201ENST00000252816 NT5C3BQ969T7 300 aa23.77■■□□□ 1.4
LSM4-201ENST00000252816 NAP1L5Q96NT1 182 aaPredicted RBP23.77■■□□□ 1.4
LSM4-201ENST00000252816 SLC6A17Q9H1V8 727 aa23.77■■□□□ 1.4
LSM4-201ENST00000252816 ARRDC1-AS1Q9H2J1 176 aa23.77■■□□□ 1.4
LSM4-201ENST00000252816 MBD1Q9UIS9 605 aaPredicted RBP23.77■■□□□ 1.4
LSM4-201ENST00000252816 DCHS1Q96JQ0 3298 aa23.77■■□□□ 1.4
LSM4-201ENST00000252816 LRP3O75074 770 aa23.76■■□□□ 1.39
LSM4-201ENST00000252816 ABCB4P21439 1286 aa23.76■■□□□ 1.39
LSM4-201ENST00000252816 MMP8P22894 467 aa23.76■■□□□ 1.39
LSM4-201ENST00000252816 FLT3P36888 993 aa23.76■■□□□ 1.39
LSM4-201ENST00000252816 LMAN2Q12907 356 aa23.76■■□□□ 1.39
LSM4-201ENST00000252816 ELF2Q15723 593 aa23.76■■□□□ 1.39
LSM4-201ENST00000252816 FSCBQ5H9T9 825 aa23.76■■□□□ 1.39
LSM4-201ENST00000252816 MBLAC2Q68D91 279 aa23.76■■□□□ 1.39
LSM4-201ENST00000252816 MMS22LQ6ZRQ5 1243 aa23.76■■□□□ 1.39
LSM4-201ENST00000252816 AHI1Q8N157 1196 aa23.76■■□□□ 1.39
LSM4-201ENST00000252816 CARNMT1Q8N4J0 409 aa23.76■■□□□ 1.39
LSM4-201ENST00000252816 MSANTD4Q8NCY6 345 aa23.76■■□□□ 1.39
LSM4-201ENST00000252816 SLC30A5Q8TAD4 765 aa23.76■■□□□ 1.39
LSM4-201ENST00000252816 CBX8Q9HC52 389 aa23.76■■□□□ 1.39
LSM4-201ENST00000252816 SEMA4GQ9NTN9 838 aa23.76■■□□□ 1.39
LSM4-201ENST00000252816 PIGVQ9NUD9 493 aa23.76■■□□□ 1.39
LSM4-201ENST00000252816 RRN3Q9NYV6 651 aa23.76■■□□□ 1.39
LSM4-201ENST00000252816 SLC12A6Q9UHW9 1150 aa23.76■■□□□ 1.39
LSM4-201ENST00000252816 TMEM59LQ9UK28 342 aa23.76■■□□□ 1.39
LSM4-201ENST00000252816 TYW5A2RUC4 315 aaKnown RBP23.75■■□□□ 1.39
LSM4-201ENST00000252816 RHOBTB1O94844 696 aa23.75■■□□□ 1.39
LSM4-201ENST00000252816 LUC7L3O95232 432 aaKnown RBP23.75■■□□□ 1.39
LSM4-201ENST00000252816 UNGP13051 313 aaPredicted RBP23.75■■□□□ 1.39
LSM4-201ENST00000252816 CCDC6Q16204 474 aa23.75■■□□□ 1.39
LSM4-201ENST00000252816 PTPRNQ16849 979 aa23.75■■□□□ 1.39
LSM4-201ENST00000252816 FUT11Q495W5 492 aa23.75■■□□□ 1.39
LSM4-201ENST00000252816 PMS2CLQ68D20 193 aa23.75■■□□□ 1.39
LSM4-201ENST00000252816 TRIM72Q6ZMU5 477 aa23.75■■□□□ 1.39
LSM4-201ENST00000252816 C11orf74Q86VG3 221 aa23.75■■□□□ 1.39
LSM4-201ENST00000252816 MRGPRX1Q96LB2 322 aa23.75■■□□□ 1.39
LSM4-201ENST00000252816 ANLNQ9NQW6 1124 aa23.75■■□□□ 1.39
LSM4-201ENST00000252816 INTS6Q9UL03 887 aaKnown RBP23.75■■□□□ 1.39
LSM4-201ENST00000252816 A0A1B0GTH6 734 aa23.74■■□□□ 1.39
LSM4-201ENST00000252816 F5H5T6 163 aa23.74■■□□□ 1.39
LSM4-201ENST00000252816 PTMSP20962 102 aa23.74■■□□□ 1.39
LSM4-201ENST00000252816 CXCR3P49682 368 aa23.74■■□□□ 1.39
LSM4-201ENST00000252816 SULT1E1P49888 294 aa23.74■■□□□ 1.39
LSM4-201ENST00000252816 CDH18Q13634 790 aa23.74■■□□□ 1.39
LSM4-201ENST00000252816 STARD3Q14849 445 aa23.74■■□□□ 1.39
LSM4-201ENST00000252816 CSRP2Q16527 193 aa23.74■■□□□ 1.39
LSM4-201ENST00000252816 SERPINA13PQ6UXR4 307 aa23.74■■□□□ 1.39
LSM4-201ENST00000252816 PHLDB2Q86SQ0 1253 aa23.74■■□□□ 1.39
LSM4-201ENST00000252816 LUZP1Q86V48 1076 aa23.74■■□□□ 1.39
LSM4-201ENST00000252816 ZNF557Q8N988 423 aaPredicted RBP23.74■■□□□ 1.39
LSM4-201ENST00000252816 PGAP3Q96FM1 320 aaPredicted RBP23.74■■□□□ 1.39
LSM4-201ENST00000252816 SPACA7Q96KW9 195 aa23.74■■□□□ 1.39
LSM4-201ENST00000252816 TBCBQ99426 244 aa23.74■■□□□ 1.39
LSM4-201ENST00000252816 STAP1Q9ULZ2 295 aa23.74■■□□□ 1.39
LSM4-201ENST00000252816 I6L893 689 aaPredicted RBP23.73■■□□□ 1.39
LSM4-201ENST00000252816 ZBTB24O43167 697 aaPredicted RBP23.73■■□□□ 1.39
LSM4-201ENST00000252816 PAGE1O75459 146 aa23.73■■□□□ 1.39
LSM4-201ENST00000252816 ADCY5O95622 1261 aa23.73■■□□□ 1.39
LSM4-201ENST00000252816 HLA-EP13747 358 aa23.73■■□□□ 1.39
LSM4-201ENST00000252816 GGCXP38435 758 aa23.73■■□□□ 1.39
LSM4-201ENST00000252816 ATXN1P54253 815 aaKnown RBP23.73■■□□□ 1.39
LSM4-201ENST00000252816 PTP4A2Q12974 167 aa23.73■■□□□ 1.39
LSM4-201ENST00000252816 AUHQ13825 339 aaKnown RBP23.73■■□□□ 1.39
LSM4-201ENST00000252816 E2F5Q15329 346 aa23.73■■□□□ 1.39
LSM4-201ENST00000252816 CLEC16AQ2KHT3 1053 aa23.73■■□□□ 1.39
LSM4-201ENST00000252816 SLC25A52Q3SY17 297 aa23.73■■□□□ 1.39
LSM4-201ENST00000252816 FILIP1LQ4L180 1135 aa23.73■■□□□ 1.39
LSM4-201ENST00000252816 FBXL22Q6P050 247 aa23.73■■□□□ 1.39
LSM4-201ENST00000252816 CIR1Q86X95 450 aaPredicted RBP23.73■■□□□ 1.39
LSM4-201ENST00000252816 BAP1Q92560 729 aa23.73■■□□□ 1.39
LSM4-201ENST00000252816 C11orf70Q9BRQ4 267 aa23.73■■□□□ 1.39
LSM4-201ENST00000252816 MKRN2Q9H000 416 aaKnown RBP23.73■■□□□ 1.39
LSM4-201ENST00000252816 TMEM245Q9H330 911 aa23.73■■□□□ 1.39
LSM4-201ENST00000252816 CD93Q9NPY3 652 aa23.73■■□□□ 1.39
LSM4-201ENST00000252816 METTL5Q9NRN9 209 aaKnown RBP23.73■■□□□ 1.39
LSM4-201ENST00000252816 PCDHGA5Q9Y5G8 931 aa23.73■■□□□ 1.39
LSM4-201ENST00000252816 HS3ST4Q9Y661 456 aa23.73■■□□□ 1.39
LSM4-201ENST00000252816 DYNC1LI1Q9Y6G9 523 aaKnown RBP23.73■■□□□ 1.39
LSM4-201ENST00000252816 SYNCRIPO60506 623 aaKnown RBP23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms