RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 MRPS23Q9Y3D9 190 aaKnown RBP13.37□□□□□ -0.27
LSM8-201ENST00000249299 HS3ST4Q9Y661 456 aa13.37□□□□□ -0.27
LSM8-201ENST00000249299 E2F8A0AVK6 867 aa13.36□□□□□ -0.27
LSM8-201ENST00000249299 DRGXA6NNA5 263 aa13.36□□□□□ -0.27
LSM8-201ENST00000249299 DAPK3O43293 454 aa13.36□□□□□ -0.27
LSM8-201ENST00000249299 CST8O60676 142 aa13.36□□□□□ -0.27
LSM8-201ENST00000249299 PHF2O75151 1096 aa13.36□□□□□ -0.27
LSM8-201ENST00000249299 CD48P09326 243 aa13.36□□□□□ -0.27
LSM8-201ENST00000249299 SERPINB6P35237 376 aa13.36□□□□□ -0.27
LSM8-201ENST00000249299 ZNF33AQ06730 810 aa13.36□□□□□ -0.27
LSM8-201ENST00000249299 XRCC4Q13426 336 aa13.36□□□□□ -0.27
LSM8-201ENST00000249299 GRIN2CQ14957 1233 aa13.36□□□□□ -0.27
LSM8-201ENST00000249299 PAFAH1B3Q15102 231 aaKnown RBP13.36□□□□□ -0.27
LSM8-201ENST00000249299 MS4A13Q5J8X5 152 aa13.36□□□□□ -0.27
LSM8-201ENST00000249299 ATAT1Q5SQI0 421 aa13.36□□□□□ -0.27
LSM8-201ENST00000249299 GPR158Q5T848 1215 aa13.36□□□□□ -0.27
LSM8-201ENST00000249299 CES5AQ6NT32 575 aa13.36□□□□□ -0.27
LSM8-201ENST00000249299 AADACL2Q6P093 401 aa13.36□□□□□ -0.27
LSM8-201ENST00000249299 SYCE2Q6PIF2 218 aa13.36□□□□□ -0.27
LSM8-201ENST00000249299 Q6ZNB5 142 aa13.36□□□□□ -0.27
LSM8-201ENST00000249299 SYDE1Q6ZW31 735 aaPredicted RBP13.36□□□□□ -0.27
LSM8-201ENST00000249299 RFX6Q8HWS3 928 aa13.36□□□□□ -0.27
LSM8-201ENST00000249299 ZNF683Q8IZ20 524 aa13.36□□□□□ -0.27
LSM8-201ENST00000249299 PQLC3Q8N755 202 aa13.36□□□□□ -0.27
LSM8-201ENST00000249299 PLD5Q8N7P1 536 aa13.36□□□□□ -0.27
LSM8-201ENST00000249299 ARL14EPQ8N8R7 260 aaPredicted RBP13.36□□□□□ -0.27
LSM8-201ENST00000249299 MAB21L3Q8N8X9 362 aa13.36□□□□□ -0.27
LSM8-201ENST00000249299 CCDC26Q8TAB7 109 aa13.36□□□□□ -0.27
LSM8-201ENST00000249299 RUBCNQ92622 972 aa13.36□□□□□ -0.27
LSM8-201ENST00000249299 P3H4Q92791 437 aa13.36□□□□□ -0.27
LSM8-201ENST00000249299 NKD2Q969F2 451 aaPredicted RBP13.36□□□□□ -0.27
LSM8-201ENST00000249299 ACSF2Q96CM8 615 aaPredicted RBP13.36□□□□□ -0.27
LSM8-201ENST00000249299 OTUB2Q96DC9 234 aa13.36□□□□□ -0.27
LSM8-201ENST00000249299 HEMGNQ9BXL5 484 aa13.36□□□□□ -0.27
LSM8-201ENST00000249299 PRDM12Q9H4Q4 367 aa13.36□□□□□ -0.27
LSM8-201ENST00000249299 TRPV4Q9HBA0 871 aa13.36□□□□□ -0.27
LSM8-201ENST00000249299 ARHGEF4Q9NR80 690 aa13.36□□□□□ -0.27
LSM8-201ENST00000249299 TDP1Q9NUW8 608 aa13.36□□□□□ -0.27
LSM8-201ENST00000249299 KLHL11Q9NVR0 708 aa13.36□□□□□ -0.27
LSM8-201ENST00000249299 GPATCH2LQ9NWQ4 482 aa13.36□□□□□ -0.27
LSM8-201ENST00000249299 OBP2AQ9NY56 170 aa13.36□□□□□ -0.27
LSM8-201ENST00000249299 PCYOX1Q9UHG3 505 aa13.36□□□□□ -0.27
LSM8-201ENST00000249299 DRG1Q9Y295 367 aaKnown RBP13.36□□□□□ -0.27
LSM8-201ENST00000249299 CPQQ9Y646 472 aa13.36□□□□□ -0.27
LSM8-201ENST00000249299 ZFP37Q9Y6Q3 630 aaPredicted RBP13.36□□□□□ -0.27
LSM8-201ENST00000249299 ZNF638Q14966 1978 aaKnown RBP13.36□□□□□ -0.27
LSM8-201ENST00000249299 HACD1B0YJ81 288 aa13.35□□□□□ -0.27
LSM8-201ENST00000249299 E9PAM4 449 aa13.35□□□□□ -0.27
LSM8-201ENST00000249299 DCLK1O15075 740 aa13.35□□□□□ -0.27
LSM8-201ENST00000249299 GREM1O60565 184 aa13.35□□□□□ -0.27
LSM8-201ENST00000249299 NUDT7P0C024 238 aa13.35□□□□□ -0.27
LSM8-201ENST00000249299 KRT10P13645 584 aa13.35□□□□□ -0.27
LSM8-201ENST00000249299 RHOQP17081 205 aa13.35□□□□□ -0.27
LSM8-201ENST00000249299 GOT1P17174 413 aa13.35□□□□□ -0.27
LSM8-201ENST00000249299 EPHB2P29323 1055 aa13.35□□□□□ -0.27
LSM8-201ENST00000249299 CHKAP35790 457 aa13.35□□□□□ -0.27
LSM8-201ENST00000249299 MTHFRP42898 656 aa13.35□□□□□ -0.27
LSM8-201ENST00000249299 KCNQ1P51787 676 aa13.35□□□□□ -0.27
LSM8-201ENST00000249299 CYP4F8P98187 520 aa13.35□□□□□ -0.27
LSM8-201ENST00000249299 AUHQ13825 339 aaKnown RBP13.35□□□□□ -0.27
LSM8-201ENST00000249299 DHX34Q14147 1143 aaKnown RBP13.35□□□□□ -0.27
LSM8-201ENST00000249299 SLC5A9Q2M3M2 681 aa13.35□□□□□ -0.27
LSM8-201ENST00000249299 MPP7Q5T2T1 576 aa13.35□□□□□ -0.27
LSM8-201ENST00000249299 PIK3R6Q5UE93 754 aa13.35□□□□□ -0.27
LSM8-201ENST00000249299 TMC5Q6UXY8 1006 aa13.35□□□□□ -0.27
LSM8-201ENST00000249299 ANKS1BQ7Z6G8 1248 aa13.35□□□□□ -0.27
LSM8-201ENST00000249299 PYROXD2Q8N2H3 581 aa13.35□□□□□ -0.27
LSM8-201ENST00000249299 CPXM2Q8N436 756 aa13.35□□□□□ -0.27
LSM8-201ENST00000249299 SLC35B2Q8TB61 432 aa13.35□□□□□ -0.27
LSM8-201ENST00000249299 GRK7Q8WTQ7 553 aa13.35□□□□□ -0.27
LSM8-201ENST00000249299 E2F7Q96AV8 911 aa13.35□□□□□ -0.27
LSM8-201ENST00000249299 HAUS1Q96CS2 278 aa13.35□□□□□ -0.27
LSM8-201ENST00000249299 PABPC5Q96DU9 382 aaKnown RBP13.35□□□□□ -0.27
LSM8-201ENST00000249299 RIPOR3Q96MK2 946 aa13.35□□□□□ -0.27
LSM8-201ENST00000249299 NECTIN4Q96NY8 510 aa13.35□□□□□ -0.27
LSM8-201ENST00000249299 GAS2L1Q99501 681 aaPredicted RBP13.35□□□□□ -0.27
LSM8-201ENST00000249299 S1PR5Q9H228 398 aa13.35□□□□□ -0.27
LSM8-201ENST00000249299 IGFLR1Q9H665 355 aa13.35□□□□□ -0.27
LSM8-201ENST00000249299 RBM12Q9NTZ6 932 aaKnown RBP13.35□□□□□ -0.27
LSM8-201ENST00000249299 TBC1D14Q9P2M4 693 aa13.35□□□□□ -0.27
LSM8-201ENST00000249299 MYO7AQ13402 2215 aa13.34□□□□□ -0.27
LSM8-201ENST00000249299 CFAP69A5D8W1 941 aa13.34□□□□□ -0.27
LSM8-201ENST00000249299 FAM187AA6NFU0 413 aa13.34□□□□□ -0.27
LSM8-201ENST00000249299 F5H5T6 163 aa13.34□□□□□ -0.27
LSM8-201ENST00000249299 FAM72CH0Y354 149 aa13.34□□□□□ -0.27
LSM8-201ENST00000249299 GFRA2O00451 464 aa13.34□□□□□ -0.27
LSM8-201ENST00000249299 SLC9A3R1O14745 358 aaPredicted RBP13.34□□□□□ -0.27
LSM8-201ENST00000249299 CREB3O43889 395 aa13.34□□□□□ -0.27
LSM8-201ENST00000249299 KLKB1P03952 638 aa13.34□□□□□ -0.27
LSM8-201ENST00000249299 ITGAVP06756 1048 aa13.34□□□□□ -0.27
LSM8-201ENST00000249299 ERCC2P18074 760 aa13.34□□□□□ -0.27
LSM8-201ENST00000249299 MX2P20592 715 aa13.34□□□□□ -0.27
LSM8-201ENST00000249299 FSHRP23945 695 aa13.34□□□□□ -0.27
LSM8-201ENST00000249299 CORO1AP31146 461 aaKnown RBP13.34□□□□□ -0.27
LSM8-201ENST00000249299 STIP1P31948 543 aaKnown RBP13.34□□□□□ -0.27
LSM8-201ENST00000249299 GTF2F1P35269 517 aaKnown RBP eCLIP13.34□□□□□ -0.27
LSM8-201ENST00000249299 MAPKAPK2P49137 400 aa13.34□□□□□ -0.27
LSM8-201ENST00000249299 MMRN1Q13201 1228 aa13.34□□□□□ -0.27
LSM8-201ENST00000249299 PDK1Q15118 436 aa13.34□□□□□ -0.27
LSM8-201ENST00000249299 NOMO1Q15155 1222 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms