RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 SMAD1Q15797 465 aaKnown RBP20.1■□□□□ 0.81
CDC42EP1-201ENST00000249014 GPRIN1Q7Z2K8 1008 aa20.1■□□□□ 0.81
CDC42EP1-201ENST00000249014 CTU1Q7Z7A3 348 aaKnown RBP20.1■□□□□ 0.81
CDC42EP1-201ENST00000249014 SLC7A14Q8TBB6 771 aa20.1■□□□□ 0.81
CDC42EP1-201ENST00000249014 KCNK16Q96T55 309 aa20.1■□□□□ 0.81
CDC42EP1-201ENST00000249014 TSPYL2Q9H2G4 693 aaPredicted RBP20.1■□□□□ 0.81
CDC42EP1-201ENST00000249014 PRDM16Q9HAZ2 1276 aa20.1■□□□□ 0.81
CDC42EP1-201ENST00000249014 SYBUQ9NX95 663 aa20.1■□□□□ 0.81
CDC42EP1-201ENST00000249014 HNRNPCL1O60812 293 aaKnown RBP20.09■□□□□ 0.81
CDC42EP1-201ENST00000249014 STK10O94804 968 aaKnown RBP20.09■□□□□ 0.81
CDC42EP1-201ENST00000249014 ALDOAP04075 364 aaKnown RBP20.09■□□□□ 0.81
CDC42EP1-201ENST00000249014 BPGMP07738 259 aa20.09■□□□□ 0.81
CDC42EP1-201ENST00000249014 FAM200BP0CF97 657 aa20.09■□□□□ 0.81
CDC42EP1-201ENST00000249014 HOXC8P31273 242 aa20.09■□□□□ 0.81
CDC42EP1-201ENST00000249014 CACNA2D1P54289 1103 aa20.09■□□□□ 0.81
CDC42EP1-201ENST00000249014 OLIG2Q13516 323 aa20.09■□□□□ 0.81
CDC42EP1-201ENST00000249014 IRF5Q13568 498 aa20.09■□□□□ 0.81
CDC42EP1-201ENST00000249014 CRYMQ14894 314 aa20.09■□□□□ 0.81
CDC42EP1-201ENST00000249014 ALYREFQ86V81 257 aaKnown RBP20.09■□□□□ 0.81
CDC42EP1-201ENST00000249014 TRIM42Q8IWZ5 723 aa20.09■□□□□ 0.81
CDC42EP1-201ENST00000249014 SENP8Q96LD8 212 aa20.09■□□□□ 0.81
CDC42EP1-201ENST00000249014 PGLYRP2Q96PD5 576 aa20.09■□□□□ 0.81
CDC42EP1-201ENST00000249014 CADM1Q9BY67 442 aaKnown RBP20.09■□□□□ 0.81
CDC42EP1-201ENST00000249014 WDR6Q9NNW5 1121 aaKnown RBP20.09■□□□□ 0.81
CDC42EP1-201ENST00000249014 IL1RAPL1Q9NZN1 696 aa20.09■□□□□ 0.81
CDC42EP1-201ENST00000249014 TIMM13Q9Y5L4 95 aaPredicted RBP20.09■□□□□ 0.81
CDC42EP1-201ENST00000249014 PSAT1Q9Y617 370 aa20.09■□□□□ 0.81
CDC42EP1-201ENST00000249014 KCNK1O00180 336 aa20.08■□□□□ 0.81
CDC42EP1-201ENST00000249014 DIAPH2O60879 1101 aa20.08■□□□□ 0.81
CDC42EP1-201ENST00000249014 CAPN15O75808 1086 aa20.08■□□□□ 0.81
CDC42EP1-201ENST00000249014 CNTFP26441 200 aa20.08■□□□□ 0.81
CDC42EP1-201ENST00000249014 ADRA1BP35368 520 aa20.08■□□□□ 0.81
CDC42EP1-201ENST00000249014 MLH1P40692 756 aa20.08■□□□□ 0.81
CDC42EP1-201ENST00000249014 FKBP1BP68106 108 aa20.08■□□□□ 0.81
CDC42EP1-201ENST00000249014 ATG16L1Q676U5 607 aa20.08■□□□□ 0.81
CDC42EP1-201ENST00000249014 PACS1Q6VY07 963 aa20.08■□□□□ 0.81
CDC42EP1-201ENST00000249014 ARID3BQ8IVW6 561 aaPredicted RBP20.08■□□□□ 0.81
CDC42EP1-201ENST00000249014 ZMIZ2Q8NF64 920 aa20.08■□□□□ 0.81
CDC42EP1-201ENST00000249014 PGBD4Q96DM1 585 aa20.08■□□□□ 0.81
CDC42EP1-201ENST00000249014 NSL1Q96IY1 281 aa20.08■□□□□ 0.81
CDC42EP1-201ENST00000249014 SMOQ99835 787 aa20.08■□□□□ 0.81
CDC42EP1-201ENST00000249014 NMUR2Q9GZQ4 415 aa20.08■□□□□ 0.81
CDC42EP1-201ENST00000249014 DENND2DQ9H6A0 471 aaPredicted RBP20.08■□□□□ 0.81
CDC42EP1-201ENST00000249014 TRPM7Q96QT4 1865 aa20.08■□□□□ 0.8
CDC42EP1-201ENST00000249014 MYBPHLA2RUH7 354 aa20.08■□□□□ 0.8
CDC42EP1-201ENST00000249014 FCHO1O14526 889 aa20.08■□□□□ 0.8
CDC42EP1-201ENST00000249014 PPP1R12AO14974 1030 aaPredicted RBP20.08■□□□□ 0.8
CDC42EP1-201ENST00000249014 CCDC22O60826 627 aa20.08■□□□□ 0.8
CDC42EP1-201ENST00000249014 GSRP00390 522 aa20.08■□□□□ 0.8
CDC42EP1-201ENST00000249014 PGAM1P18669 254 aa20.08■□□□□ 0.8
CDC42EP1-201ENST00000249014 DAOAP59103 153 aa20.08■□□□□ 0.8
CDC42EP1-201ENST00000249014 IRX4P78413 519 aa20.08■□□□□ 0.8
CDC42EP1-201ENST00000249014 ZCCHC23Q6ZST2 131 aa20.08■□□□□ 0.8
CDC42EP1-201ENST00000249014 PCED1BQ96HM7 432 aa20.08■□□□□ 0.8
CDC42EP1-201ENST00000249014 GORASP1Q9BQQ3 440 aa20.08■□□□□ 0.8
CDC42EP1-201ENST00000249014 TACO1Q9BSH4 297 aaKnown RBP20.08■□□□□ 0.8
CDC42EP1-201ENST00000249014 AP5M1Q9H0R1 490 aa20.08■□□□□ 0.8
CDC42EP1-201ENST00000249014 ARMCX1Q9P291 453 aa20.08■□□□□ 0.8
CDC42EP1-201ENST00000249014 SNNO75324 88 aaPredicted RBP20.07■□□□□ 0.8
CDC42EP1-201ENST00000249014 CELF2O95319 508 aaKnown RBP20.07■□□□□ 0.8
CDC42EP1-201ENST00000249014 ERCC2P18074 760 aa20.07■□□□□ 0.8
CDC42EP1-201ENST00000249014 CYP2B6P20813 491 aa20.07■□□□□ 0.8
CDC42EP1-201ENST00000249014 PURAQ00577 322 aaKnown RBP20.07■□□□□ 0.8
CDC42EP1-201ENST00000249014 CES3Q6UWW8 571 aa20.07■□□□□ 0.8
CDC42EP1-201ENST00000249014 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.07■□□□□ 0.82e-7■■■■□ 24.4
CDC42EP1-201ENST00000249014 C3orf58Q8NDZ4 430 aa20.07■□□□□ 0.8
CDC42EP1-201ENST00000249014 BTBD10Q9BSF8 475 aa20.07■□□□□ 0.8
CDC42EP1-201ENST00000249014 RNPEPL1Q9HAU8 725 aa20.07■□□□□ 0.8
CDC42EP1-201ENST00000249014 XPNPEP3Q9NQH7 507 aa20.07■□□□□ 0.8
CDC42EP1-201ENST00000249014 MIOSQ9NXC5 875 aa20.07■□□□□ 0.8
CDC42EP1-201ENST00000249014 KCNK4Q9NYG8 393 aa20.07■□□□□ 0.8
CDC42EP1-201ENST00000249014 IGSF9Q9P2J2 1179 aa20.07■□□□□ 0.8
CDC42EP1-201ENST00000249014 MARCOQ9UEW3 520 aaPredicted RBP20.07■□□□□ 0.8
CDC42EP1-201ENST00000249014 EMCNQ9ULC0 261 aa20.07■□□□□ 0.8
CDC42EP1-201ENST00000249014 TPP1O14773 563 aa20.07■□□□□ 0.8
CDC42EP1-201ENST00000249014 CAPN9O14815 690 aa20.07■□□□□ 0.8
CDC42EP1-201ENST00000249014 AP1G2O75843 785 aa20.07■□□□□ 0.8
CDC42EP1-201ENST00000249014 KITP10721 976 aa20.07■□□□□ 0.8
CDC42EP1-201ENST00000249014 CLCNKBP51801 687 aa20.07■□□□□ 0.8
CDC42EP1-201ENST00000249014 SEMA3BQ13214 749 aa20.07■□□□□ 0.8
CDC42EP1-201ENST00000249014 C16orf46Q6P387 395 aa20.07■□□□□ 0.8
CDC42EP1-201ENST00000249014 RFWD3Q6PCD5 774 aa20.07■□□□□ 0.8
CDC42EP1-201ENST00000249014 PID1Q7Z2X4 250 aa20.07■□□□□ 0.8
CDC42EP1-201ENST00000249014 FAM35AQ86V20 835 aa20.07■□□□□ 0.8
CDC42EP1-201ENST00000249014 C2orf69Q8N8R5 385 aa20.07■□□□□ 0.8
CDC42EP1-201ENST00000249014 GAD1Q99259 594 aa20.07■□□□□ 0.8
CDC42EP1-201ENST00000249014 SYT15Q9BQS2 421 aa20.07■□□□□ 0.8
CDC42EP1-201ENST00000249014 KATNAL1Q9BW62 490 aa20.07■□□□□ 0.8
CDC42EP1-201ENST00000249014 NUP205Q92621 2012 aa20.06■□□□□ 0.8
CDC42EP1-201ENST00000249014 BIRC5O15392 142 aa20.06■□□□□ 0.8
CDC42EP1-201ENST00000249014 ENTPD5O75356 428 aa20.06■□□□□ 0.8
CDC42EP1-201ENST00000249014 USP17L7P0C7H9 530 aa20.06■□□□□ 0.8
CDC42EP1-201ENST00000249014 IFRD2Q12894 506 aaPredicted RBP20.06■□□□□ 0.8
CDC42EP1-201ENST00000249014 PDE1CQ14123 709 aaPredicted RBP20.06■□□□□ 0.8
CDC42EP1-201ENST00000249014 KRT72Q14CN4 511 aa20.06■□□□□ 0.8
CDC42EP1-201ENST00000249014 FSCN1Q16658 493 aaKnown RBP20.06■□□□□ 0.8
CDC42EP1-201ENST00000249014 RINLQ6ZS11 566 aa20.06■□□□□ 0.8
CDC42EP1-201ENST00000249014 GIMAP7Q8NHV1 300 aa20.06■□□□□ 0.8
CDC42EP1-201ENST00000249014 TTC8Q8TAM2 541 aa20.06■□□□□ 0.8
CDC42EP1-201ENST00000249014 CDKL2Q92772 493 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms