RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 ANO7Q6IWH7 933 aa12.96□□□□□ -0.34
RAB3IP-201ENST00000247833 ULK2Q8IYT8 1036 aa12.96□□□□□ -0.34
RAB3IP-201ENST00000247833 TEKT4Q8WW24 435 aa12.96□□□□□ -0.34
RAB3IP-201ENST00000247833 LENG1Q96BZ8 264 aaPredicted RBP12.96□□□□□ -0.34
RAB3IP-201ENST00000247833 TNIP3Q96KP6 325 aa12.96□□□□□ -0.34
RAB3IP-201ENST00000247833 C20orf96Q9NUD7 363 aaPredicted RBP12.96□□□□□ -0.34
RAB3IP-201ENST00000247833 UBQLN1Q9UMX0 589 aaKnown RBP12.96□□□□□ -0.34
RAB3IP-201ENST00000247833 INPP5FQ9Y2H2 1132 aa12.96□□□□□ -0.34
RAB3IP-201ENST00000247833 MCM3APO60318 1980 aa12.96□□□□□ -0.34
RAB3IP-201ENST00000247833 ITGA2BP08514 1039 aa12.95□□□□□ -0.34
RAB3IP-201ENST00000247833 VAV1P15498 845 aa12.95□□□□□ -0.34
RAB3IP-201ENST00000247833 GNAZP19086 355 aa12.95□□□□□ -0.34
RAB3IP-201ENST00000247833 TAF6P49848 677 aa12.95□□□□□ -0.34
RAB3IP-201ENST00000247833 PGGT1BP53609 377 aa12.95□□□□□ -0.34
RAB3IP-201ENST00000247833 RABGAP1LQ5R372 815 aa12.95□□□□□ -0.34
RAB3IP-201ENST00000247833 ZNF276Q8N554 614 aa12.95□□□□□ -0.34
RAB3IP-201ENST00000247833 CCNYL1Q8N7R7 359 aa12.95□□□□□ -0.34
RAB3IP-201ENST00000247833 ANKRD52Q8NB46 1076 aa12.95□□□□□ -0.34
RAB3IP-201ENST00000247833 FGD4Q96M96 766 aa12.95□□□□□ -0.34
RAB3IP-201ENST00000247833 SLC4A5Q9BY07 1137 aa12.95□□□□□ -0.34
RAB3IP-201ENST00000247833 C20orf27Q9GZN8 174 aa12.95□□□□□ -0.34
RAB3IP-201ENST00000247833 ARHGEF4Q9NR80 690 aa12.95□□□□□ -0.34
RAB3IP-201ENST00000247833 DDIT4Q9NX09 232 aa12.95□□□□□ -0.34
RAB3IP-201ENST00000247833 TLK1Q9UKI8 766 aa12.95□□□□□ -0.34
RAB3IP-201ENST00000247833 AIM2O14862 343 aa12.95□□□□□ -0.34
RAB3IP-201ENST00000247833 XPOTO43592 962 aaKnown RBP12.95□□□□□ -0.34
RAB3IP-201ENST00000247833 DHRS4L1P0CG22 281 aa12.95□□□□□ -0.34
RAB3IP-201ENST00000247833 SETSIPP0DME0 302 aa12.95□□□□□ -0.34
RAB3IP-201ENST00000247833 FDFT1P37268 417 aa12.95□□□□□ -0.34
RAB3IP-201ENST00000247833 GRM5P41594 1212 aa12.95□□□□□ -0.34
RAB3IP-201ENST00000247833 DLG2Q15700 870 aa12.95□□□□□ -0.34
RAB3IP-201ENST00000247833 DCAF4L1Q3SXM0 396 aa12.95□□□□□ -0.34
RAB3IP-201ENST00000247833 TMEM110Q86TL2 294 aa12.95□□□□□ -0.34
RAB3IP-201ENST00000247833 MOCOSQ96EN8 888 aa12.95□□□□□ -0.34
RAB3IP-201ENST00000247833 ZNF560Q96MR9 790 aa12.95□□□□□ -0.34
RAB3IP-201ENST00000247833 RNF39Q9H2S5 420 aa12.95□□□□□ -0.34
RAB3IP-201ENST00000247833 SERPINB5P36952 375 aa12.95□□□□□ -0.34
RAB3IP-201ENST00000247833 NR2C2P49116 596 aa12.95□□□□□ -0.34
RAB3IP-201ENST00000247833 TKTL1P51854 596 aa12.95□□□□□ -0.34
RAB3IP-201ENST00000247833 COPAP53621 1224 aa12.95□□□□□ -0.34
RAB3IP-201ENST00000247833 ASPHQ12797 758 aa12.95□□□□□ -0.34
RAB3IP-201ENST00000247833 DGKDQ16760 1214 aa12.95□□□□□ -0.34
RAB3IP-201ENST00000247833 RASIP1Q5U651 963 aa12.95□□□□□ -0.34
RAB3IP-201ENST00000247833 C9orf57Q5W0N0 161 aa12.95□□□□□ -0.34
RAB3IP-201ENST00000247833 NCBP2-AS2Q69YL0 99 aa12.95□□□□□ -0.34
RAB3IP-201ENST00000247833 PDZD4Q76G19 769 aaPredicted RBP12.95□□□□□ -0.34
RAB3IP-201ENST00000247833 SGF29Q96ES7 293 aa12.95□□□□□ -0.34
RAB3IP-201ENST00000247833 C7orf26Q96N11 449 aa12.95□□□□□ -0.34
RAB3IP-201ENST00000247833 TMEM216Q9P0N5 145 aa12.95□□□□□ -0.34
RAB3IP-201ENST00000247833 MYL3P08590 195 aa12.94□□□□□ -0.34
RAB3IP-201ENST00000247833 CPA3P15088 417 aa12.94□□□□□ -0.34
RAB3IP-201ENST00000247833 PRKCHP24723 683 aa12.94□□□□□ -0.34
RAB3IP-201ENST00000247833 CRHR1P34998 444 aa12.94□□□□□ -0.34
RAB3IP-201ENST00000247833 PDE1CQ14123 709 aaPredicted RBP12.94□□□□□ -0.34
RAB3IP-201ENST00000247833 RALGPS1Q5JS13 557 aa12.94□□□□□ -0.34
RAB3IP-201ENST00000247833 TTC16Q8NEE8 873 aa12.94□□□□□ -0.34
RAB3IP-201ENST00000247833 ZNF180Q9UJW8 692 aa12.94□□□□□ -0.34
RAB3IP-201ENST00000247833 SPDYE5A6NIY4 337 aa12.94□□□□□ -0.34
RAB3IP-201ENST00000247833 E7ENQ6 273 aa12.94□□□□□ -0.34
RAB3IP-201ENST00000247833 GCATO75600 419 aa12.94□□□□□ -0.34
RAB3IP-201ENST00000247833 SMNDC1O75940 238 aaKnown RBP eCLIP12.94□□□□□ -0.34
RAB3IP-201ENST00000247833 ACADSBP45954 432 aa12.94□□□□□ -0.34
RAB3IP-201ENST00000247833 CCNHP51946 323 aaPredicted RBP12.94□□□□□ -0.34
RAB3IP-201ENST00000247833 SEPT6Q14141 434 aa12.94□□□□□ -0.34
RAB3IP-201ENST00000247833 SLC26A9Q7LBE3 791 aa12.94□□□□□ -0.34
RAB3IP-201ENST00000247833 DEFB107AQ8IZN7 70 aa12.94□□□□□ -0.34
RAB3IP-201ENST00000247833 MCUQ8NE86 351 aa12.94□□□□□ -0.34
RAB3IP-201ENST00000247833 QKIQ96PU8 341 aaKnown RBP eCLIP12.94□□□□□ -0.34
RAB3IP-201ENST00000247833 TASP1Q9H6P5 420 aa12.94□□□□□ -0.34
RAB3IP-201ENST00000247833 KRT82Q9NSB4 513 aa12.94□□□□□ -0.34
RAB3IP-201ENST00000247833 IARS2Q9NSE4 1012 aaKnown RBP12.94□□□□□ -0.34
RAB3IP-201ENST00000247833 SOX13Q9UN79 622 aa12.94□□□□□ -0.34
RAB3IP-201ENST00000247833 SNX10Q9Y5X0 201 aa12.94□□□□□ -0.34
RAB3IP-201ENST00000247833 CCDC160A6NGH7 325 aa12.94□□□□□ -0.34
RAB3IP-201ENST00000247833 DFFAO00273 331 aa12.94□□□□□ -0.34
RAB3IP-201ENST00000247833 TRAFD1O14545 582 aaPredicted RBP12.94□□□□□ -0.34
RAB3IP-201ENST00000247833 ENDOD1O94919 500 aa12.94□□□□□ -0.34
RAB3IP-201ENST00000247833 JCHAINP01591 159 aa12.94□□□□□ -0.34
RAB3IP-201ENST00000247833 CTSHP09668 335 aa12.94□□□□□ -0.34
RAB3IP-201ENST00000247833 SNAPC2Q13487 334 aa12.94□□□□□ -0.34
RAB3IP-201ENST00000247833 DPYSL2Q16555 572 aa12.94□□□□□ -0.34
RAB3IP-201ENST00000247833 SYPL2Q5VXT5 272 aa12.94□□□□□ -0.34
RAB3IP-201ENST00000247833 WSCD1Q658N2 575 aa12.94□□□□□ -0.34
RAB3IP-201ENST00000247833 PDPK2PQ6A1A2 396 aa12.94□□□□□ -0.34
RAB3IP-201ENST00000247833 RNF148Q8N7C7 305 aa12.94□□□□□ -0.34
RAB3IP-201ENST00000247833 ZFP42Q96MM3 310 aa12.94□□□□□ -0.34
RAB3IP-201ENST00000247833 SLC7A8Q9UHI5 535 aa12.94□□□□□ -0.34
RAB3IP-201ENST00000247833 LRCH1Q9Y2L9 728 aa12.94□□□□□ -0.34
RAB3IP-201ENST00000247833 CITO14578 2027 aa12.94□□□□□ -0.34
RAB3IP-201ENST00000247833 FAM159BA6NKW6 160 aa12.93□□□□□ -0.34
RAB3IP-201ENST00000247833 SERPINE1P05121 402 aa12.93□□□□□ -0.34
RAB3IP-201ENST00000247833 OCRLQ01968 901 aa12.93□□□□□ -0.34
RAB3IP-201ENST00000247833 KRT72Q14CN4 511 aa12.93□□□□□ -0.34
RAB3IP-201ENST00000247833 C4orf22Q6V702 233 aa12.93□□□□□ -0.34
RAB3IP-201ENST00000247833 RNF135Q8IUD6 432 aa12.93□□□□□ -0.34
RAB3IP-201ENST00000247833 DCLK2Q8N568 766 aa12.93□□□□□ -0.34
RAB3IP-201ENST00000247833 AGAP2Q99490 1192 aa12.93□□□□□ -0.34
RAB3IP-201ENST00000247833 ULBP1Q9BZM6 244 aa12.93□□□□□ -0.34
RAB3IP-201ENST00000247833 PLEKHA5Q9HAU0 1116 aa12.93□□□□□ -0.34
RAB3IP-201ENST00000247833 VANGL2Q9ULK5 521 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms