RNA–Protein interactions for RNA: ENST00000244227.7

SNRNP27-201, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP27, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-201ENST00000244227 CSF2RAP15509 400 aa14.18□□□□□ -0.14
SNRNP27-201ENST00000244227 RPL17P18621 184 aaKnown RBP14.18□□□□□ -0.14
SNRNP27-201ENST00000244227 EPHB2P29323 1055 aa14.18□□□□□ -0.14
SNRNP27-201ENST00000244227 HOXC13P31276 330 aa14.18□□□□□ -0.14
SNRNP27-201ENST00000244227 AP1B1Q10567 949 aa14.18□□□□□ -0.14
SNRNP27-201ENST00000244227 SEMA5AQ13591 1074 aa14.18□□□□□ -0.14
SNRNP27-201ENST00000244227 BBS9Q3SYG4 887 aa14.18□□□□□ -0.14
SNRNP27-201ENST00000244227 ZNF534Q76KX8 674 aa14.18□□□□□ -0.14
SNRNP27-201ENST00000244227 ARHGAP18Q8N392 663 aa14.18□□□□□ -0.14
SNRNP27-201ENST00000244227 ARFGAP2Q8N6H7 521 aa14.18□□□□□ -0.14
SNRNP27-201ENST00000244227 MCUQ8NE86 351 aa14.18□□□□□ -0.14
SNRNP27-201ENST00000244227 FBXO36Q8NEA4 188 aa14.18□□□□□ -0.14
SNRNP27-201ENST00000244227 SERPINB11Q96P15 392 aa14.18□□□□□ -0.14
SNRNP27-201ENST00000244227 MYO16Q9Y6X6 1858 aa14.18□□□□□ -0.14
SNRNP27-201ENST00000244227 E7EVH7 732 aa14.18□□□□□ -0.14
SNRNP27-201ENST00000244227 PPP1R12AO14974 1030 aaPredicted RBP14.18□□□□□ -0.14
SNRNP27-201ENST00000244227 RTN3O95197 1032 aaPredicted RBP14.18□□□□□ -0.14
SNRNP27-201ENST00000244227 ZDHHC11BP0C7U3 371 aa14.18□□□□□ -0.14
SNRNP27-201ENST00000244227 ATF6P18850 670 aa14.18□□□□□ -0.14
SNRNP27-201ENST00000244227 TPSB2P20231 275 aa14.18□□□□□ -0.14
SNRNP27-201ENST00000244227 SSTR1P30872 391 aa14.18□□□□□ -0.14
SNRNP27-201ENST00000244227 MDH1P40925 334 aaKnown RBP14.18□□□□□ -0.14
SNRNP27-201ENST00000244227 MMP13P45452 471 aa14.18□□□□□ -0.14
SNRNP27-201ENST00000244227 GNGT1P63211 74 aa14.18□□□□□ -0.14
SNRNP27-201ENST00000244227 GUCY1A3Q02108 690 aa14.18□□□□□ -0.14
SNRNP27-201ENST00000244227 GALNT2Q10471 571 aa14.18□□□□□ -0.14
SNRNP27-201ENST00000244227 TAF10Q12962 218 aa14.18□□□□□ -0.14
SNRNP27-201ENST00000244227 TPSAB1Q15661 275 aa14.18□□□□□ -0.14
SNRNP27-201ENST00000244227 PSMD5Q16401 504 aa14.18□□□□□ -0.14
SNRNP27-201ENST00000244227 CAPN12Q6ZSI9 719 aa14.18□□□□□ -0.14
SNRNP27-201ENST00000244227 PDZD4Q76G19 769 aaPredicted RBP14.18□□□□□ -0.14
SNRNP27-201ENST00000244227 EXOC3L1Q86VI1 746 aa14.18□□□□□ -0.14
SNRNP27-201ENST00000244227 VPS52Q8N1B4 723 aa14.18□□□□□ -0.14
SNRNP27-201ENST00000244227 CCNYQ8ND76 341 aa14.18□□□□□ -0.14
SNRNP27-201ENST00000244227 PYROXD1Q8WU10 500 aa14.18□□□□□ -0.14
SNRNP27-201ENST00000244227 DPF3Q92784 378 aa14.18□□□□□ -0.14
SNRNP27-201ENST00000244227 FBXO32Q969P5 355 aa14.18□□□□□ -0.14
SNRNP27-201ENST00000244227 FCRL2Q96LA5 508 aaPredicted RBP14.18□□□□□ -0.14
SNRNP27-201ENST00000244227 SIK2Q9H0K1 926 aa14.18□□□□□ -0.14
SNRNP27-201ENST00000244227 VPS37BQ9H9H4 285 aa14.18□□□□□ -0.14
SNRNP27-201ENST00000244227 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.18□□□□□ -0.143e-7■■■■■ 96.8
SNRNP27-201ENST00000244227 COMMD8Q9NX08 183 aa14.18□□□□□ -0.14
SNRNP27-201ENST00000244227 CLIC5Q9NZA1 410 aa14.18□□□□□ -0.14
SNRNP27-201ENST00000244227 LGALS13Q9UHV8 139 aa14.18□□□□□ -0.14
SNRNP27-201ENST00000244227 TLR6Q9Y2C9 796 aa14.18□□□□□ -0.14
SNRNP27-201ENST00000244227 TEX264Q9Y6I9 313 aa14.18□□□□□ -0.14
SNRNP27-201ENST00000244227 RNF103O00237 685 aa14.17□□□□□ -0.14
SNRNP27-201ENST00000244227 KIAA0355O15063 1070 aa14.17□□□□□ -0.14
SNRNP27-201ENST00000244227 TBX18O95935 607 aa14.17□□□□□ -0.14
SNRNP27-201ENST00000244227 APRTP07741 180 aa14.17□□□□□ -0.14
SNRNP27-201ENST00000244227 SRGAP2BP0DMP2 458 aa14.17□□□□□ -0.14
SNRNP27-201ENST00000244227 OR1D2P34982 312 aa14.17□□□□□ -0.14
SNRNP27-201ENST00000244227 ELK3P41970 407 aa14.17□□□□□ -0.14
SNRNP27-201ENST00000244227 MAGEA3P43357 314 aa14.17□□□□□ -0.14
SNRNP27-201ENST00000244227 PPARDQ03181 441 aa14.17□□□□□ -0.14
SNRNP27-201ENST00000244227 DMTNQ08495 405 aa14.17□□□□□ -0.14
SNRNP27-201ENST00000244227 PPIDQ08752 370 aaKnown RBP14.17□□□□□ -0.14
SNRNP27-201ENST00000244227 FAM117BQ6P1L5 589 aa14.17□□□□□ -0.14
SNRNP27-201ENST00000244227 PPP1R21Q6ZMI0 780 aa14.17□□□□□ -0.14
SNRNP27-201ENST00000244227 ARHGEF18Q6ZSZ5 1173 aa14.17□□□□□ -0.14
SNRNP27-201ENST00000244227 ZNF567Q8N184 647 aa14.17□□□□□ -0.14
SNRNP27-201ENST00000244227 SLC39A11Q8N1S5 342 aa14.17□□□□□ -0.14
SNRNP27-201ENST00000244227 CLSTN3Q9BQT9 956 aa14.17□□□□□ -0.14
SNRNP27-201ENST00000244227 CCDC77Q9BR77 488 aa14.17□□□□□ -0.14
SNRNP27-201ENST00000244227 CEP41Q9BYV8 373 aa14.17□□□□□ -0.14
SNRNP27-201ENST00000244227 FRMD8Q9BZ67 464 aaPredicted RBP14.17□□□□□ -0.14
SNRNP27-201ENST00000244227 RABGEF1Q9UJ41 708 aa14.17□□□□□ -0.14
SNRNP27-201ENST00000244227 HS3ST4Q9Y661 456 aa14.17□□□□□ -0.14
SNRNP27-201ENST00000244227 A6NNZ2 444 aa14.16□□□□□ -0.14
SNRNP27-201ENST00000244227 FOXO6A8MYZ6 492 aa14.16□□□□□ -0.14
SNRNP27-201ENST00000244227 NCAM2O15394 837 aa14.16□□□□□ -0.14
SNRNP27-201ENST00000244227 OPHN1O60890 802 aa14.16□□□□□ -0.14
SNRNP27-201ENST00000244227 SOD2P04179 222 aa14.16□□□□□ -0.14
SNRNP27-201ENST00000244227 TSHRP16473 764 aa14.16□□□□□ -0.14
SNRNP27-201ENST00000244227 MLLT6P55198 1093 aaPredicted RBP14.16□□□□□ -0.14
SNRNP27-201ENST00000244227 WDR5P61964 334 aaKnown RBP14.16□□□□□ -0.14
SNRNP27-201ENST00000244227 RPL10AP62906 217 aaKnown RBP14.16□□□□□ -0.14
SNRNP27-201ENST00000244227 NRG1Q02297 640 aaPredicted RBP14.16□□□□□ -0.14
SNRNP27-201ENST00000244227 TUBB8Q3ZCM7 444 aa14.16□□□□□ -0.14
SNRNP27-201ENST00000244227 CCDC38Q502W7 563 aa14.16□□□□□ -0.14
SNRNP27-201ENST00000244227 C3orf62Q6ZUJ4 267 aa14.16□□□□□ -0.14
SNRNP27-201ENST00000244227 C14orf80Q86SX3 495 aa14.16□□□□□ -0.14
SNRNP27-201ENST00000244227 TDRPQ86YL5 185 aa14.16□□□□□ -0.14
SNRNP27-201ENST00000244227 ATP11CQ8NB49 1132 aa14.16□□□□□ -0.14
SNRNP27-201ENST00000244227 COLGALT1Q8NBJ5 622 aa14.16□□□□□ -0.14
SNRNP27-201ENST00000244227 ZSCAN18Q8TBC5 510 aaPredicted RBP14.16□□□□□ -0.14
SNRNP27-201ENST00000244227 GIPC2Q8TF65 315 aa14.16□□□□□ -0.14
SNRNP27-201ENST00000244227 MAML1Q92585 1016 aa14.16□□□□□ -0.14
SNRNP27-201ENST00000244227 HDAC11Q96DB2 347 aa14.16□□□□□ -0.14
SNRNP27-201ENST00000244227 CHMP2BQ9UQN3 213 aa14.16□□□□□ -0.14
SNRNP27-201ENST00000244227 GREB1Q4ZG55 1949 aa14.15□□□□□ -0.14
SNRNP27-201ENST00000244227 EXOC1LA0A1B0GW35 172 aa14.15□□□□□ -0.14
SNRNP27-201ENST00000244227 SLC38A8A6NNN8 435 aa14.15□□□□□ -0.14
SNRNP27-201ENST00000244227 KCNK1O00180 336 aa14.15□□□□□ -0.14
SNRNP27-201ENST00000244227 CDH16O75309 829 aa14.15□□□□□ -0.14
SNRNP27-201ENST00000244227 IVLP07476 585 aa14.15□□□□□ -0.14
SNRNP27-201ENST00000244227 ACRP10323 421 aa14.15□□□□□ -0.14
SNRNP27-201ENST00000244227 PTPN3P26045 913 aa14.15□□□□□ -0.14
SNRNP27-201ENST00000244227 HTR7P34969 479 aa14.15□□□□□ -0.14
SNRNP27-201ENST00000244227 FDFT1P37268 417 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms