RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 CEP68Q76N32 757 aa13.49□□□□□ -0.25
NEK9-201ENST00000238616 ATP6V1C2Q8NEY4 427 aa13.49□□□□□ -0.25
NEK9-201ENST00000238616 MSRAQ9UJ68 235 aa13.49□□□□□ -0.25
NEK9-201ENST00000238616 HMGB3O15347 200 aaKnown RBP13.49□□□□□ -0.25
NEK9-201ENST00000238616 ADCY6O43306 1168 aa13.49□□□□□ -0.25
NEK9-201ENST00000238616 HOXA2O43364 376 aa13.49□□□□□ -0.25
NEK9-201ENST00000238616 ZCWPW2Q504Y3 356 aa13.49□□□□□ -0.25
NEK9-201ENST00000238616 POMZP3Q6PJE2 187 aa13.49□□□□□ -0.25
NEK9-201ENST00000238616 KLHL4Q9C0H6 718 aa13.49□□□□□ -0.25
NEK9-201ENST00000238616 ADGRG1Q9Y653 693 aa13.49□□□□□ -0.25
NEK9-201ENST00000238616 LOC102724159A0A0B4J2E5 919 aa13.49□□□□□ -0.25
NEK9-201ENST00000238616 EPHX2P34913 555 aa13.49□□□□□ -0.25
NEK9-201ENST00000238616 PWP2Q15269 919 aaKnown RBP13.49□□□□□ -0.25
NEK9-201ENST00000238616 ARMC3Q5W041 872 aa13.49□□□□□ -0.25
NEK9-201ENST00000238616 SHC4Q6S5L8 630 aa13.49□□□□□ -0.25
NEK9-201ENST00000238616 KRT73Q86Y46 540 aa13.49□□□□□ -0.25
NEK9-201ENST00000238616 TBC1D16Q8TBP0 767 aa13.49□□□□□ -0.25
NEK9-201ENST00000238616 DNAJB3Q8WWF6 145 aa13.49□□□□□ -0.25
NEK9-201ENST00000238616 ELMO1Q92556 727 aa13.49□□□□□ -0.25
NEK9-201ENST00000238616 DDX43Q9NXZ2 648 aaKnown RBP13.49□□□□□ -0.25
NEK9-201ENST00000238616 VPS4BO75351 444 aa13.48□□□□□ -0.25
NEK9-201ENST00000238616 RPL4P36578 427 aaKnown RBP13.48□□□□□ -0.25
NEK9-201ENST00000238616 ACAD10Q6JQN1 1059 aa13.48□□□□□ -0.25
NEK9-201ENST00000238616 SCUBE1Q8IWY4 988 aa13.48□□□□□ -0.25
NEK9-201ENST00000238616 PCSK9Q8NBP7 692 aaKnown RBP13.48□□□□□ -0.25
NEK9-201ENST00000238616 MCOLN3Q8TDD5 553 aa13.48□□□□□ -0.25
NEK9-201ENST00000238616 TRIM9Q9C026 710 aa13.48□□□□□ -0.25
NEK9-201ENST00000238616 BTBD3Q9Y2F9 522 aa13.48□□□□□ -0.25
NEK9-201ENST00000238616 EFR3BQ9Y2G0 817 aa13.48□□□□□ -0.25
NEK9-201ENST00000238616 PIK3CDO00329 1044 aa13.48□□□□□ -0.25
NEK9-201ENST00000238616 RHOBTB3O94955 611 aa13.48□□□□□ -0.25
NEK9-201ENST00000238616 CRATP43155 626 aa13.48□□□□□ -0.25
NEK9-201ENST00000238616 PUDPQ08623 228 aa13.48□□□□□ -0.25
NEK9-201ENST00000238616 FAM98BQ52LJ0 330 aaKnown RBP13.48□□□□□ -0.25
NEK9-201ENST00000238616 TRPV3Q8NET8 790 aa13.48□□□□□ -0.25
NEK9-201ENST00000238616 PLEKHF1Q96S99 279 aa13.48□□□□□ -0.25
NEK9-201ENST00000238616 MARK1Q9P0L2 795 aa13.48□□□□□ -0.25
NEK9-201ENST00000238616 GSAPA4D1B5 854 aa13.48□□□□□ -0.25
NEK9-201ENST00000238616 LIN7AO14910 233 aaPredicted RBP13.48□□□□□ -0.25
NEK9-201ENST00000238616 LHX1P48742 406 aa13.48□□□□□ -0.25
NEK9-201ENST00000238616 TBC1D25Q3MII6 688 aa13.48□□□□□ -0.25
NEK9-201ENST00000238616 OR10G6Q8NH81 332 aa13.48□□□□□ -0.25
NEK9-201ENST00000238616 IRX2Q9BZI1 471 aaPredicted RBP13.48□□□□□ -0.25
NEK9-201ENST00000238616 DSN1Q9H410 356 aa13.48□□□□□ -0.25
NEK9-201ENST00000238616 SNTG2Q9NY99 539 aa13.48□□□□□ -0.25
NEK9-201ENST00000238616 CCDC167Q9P0B6 97 aa13.48□□□□□ -0.25
NEK9-201ENST00000238616 RAD54BQ9Y620 910 aa13.48□□□□□ -0.25
NEK9-201ENST00000238616 PSTPIP1O43586 416 aa13.48□□□□□ -0.25
NEK9-201ENST00000238616 JCHAINP01591 159 aa13.48□□□□□ -0.25
NEK9-201ENST00000238616 TPBGLP0DKB5 382 aa13.48□□□□□ -0.25
NEK9-201ENST00000238616 NDUFA5Q16718 116 aa13.48□□□□□ -0.25
NEK9-201ENST00000238616 RNF19BQ6ZMZ0 732 aa13.48□□□□□ -0.25
NEK9-201ENST00000238616 ILDR2Q71H61 639 aa13.48□□□□□ -0.25
NEK9-201ENST00000238616 CNPY3Q9BT09 278 aa13.48□□□□□ -0.25
NEK9-201ENST00000238616 ZCCHC2Q9C0B9 1178 aaKnown RBP13.48□□□□□ -0.25
NEK9-201ENST00000238616 OR10H1Q9Y4A9 318 aa13.48□□□□□ -0.25
NEK9-201ENST00000238616 IL1BP01584 269 aa13.48□□□□□ -0.25
NEK9-201ENST00000238616 AMHP03971 560 aa13.48□□□□□ -0.25
NEK9-201ENST00000238616 HNF4AP41235 474 aa13.48□□□□□ -0.25
NEK9-201ENST00000238616 PER1O15534 1290 aaPredicted RBP13.48□□□□□ -0.25
NEK9-201ENST00000238616 OR56A5P0C7T3 313 aa13.48□□□□□ -0.25
NEK9-201ENST00000238616 CYP2F1P24903 491 aa13.48□□□□□ -0.25
NEK9-201ENST00000238616 EPHA10Q5JZY3 1008 aa13.48□□□□□ -0.25
NEK9-201ENST00000238616 CEP44Q9C0F1 390 aa13.48□□□□□ -0.25
NEK9-201ENST00000238616 RIBC2Q9H4K1 309 aa13.48□□□□□ -0.25
NEK9-201ENST00000238616 VPS45Q9NRW7 570 aa13.48□□□□□ -0.25
NEK9-201ENST00000238616 ANKDD1BA6NHY2 528 aa13.47□□□□□ -0.25
NEK9-201ENST00000238616 FAM124AQ86V42 546 aa13.47□□□□□ -0.25
NEK9-201ENST00000238616 NEK6Q9HC98 313 aa13.47□□□□□ -0.25
NEK9-201ENST00000238616 AKT2P31751 481 aa13.47□□□□□ -0.25
NEK9-201ENST00000238616 GSTM5P46439 218 aa13.47□□□□□ -0.25
NEK9-201ENST00000238616 EIF2B2P49770 351 aaKnown RBP13.47□□□□□ -0.25
NEK9-201ENST00000238616 PTPAQ15257 358 aa13.47□□□□□ -0.25
NEK9-201ENST00000238616 NAB2Q15742 525 aa13.47□□□□□ -0.25
NEK9-201ENST00000238616 ZC3H7AQ8IWR0 971 aaKnown RBP13.47□□□□□ -0.25
NEK9-201ENST00000238616 MAGEC3Q8TD91 643 aa13.47□□□□□ -0.25
NEK9-201ENST00000238616 MRPS7Q9Y2R9 242 aaKnown RBP13.47□□□□□ -0.25
NEK9-201ENST00000238616 A0A088AWK7 358 aa13.47□□□□□ -0.25
NEK9-201ENST00000238616 ABHD14A-ACY1A0A1B0GW23 586 aa13.47□□□□□ -0.25
NEK9-201ENST00000238616 ZNF10P21506 573 aaPredicted RBP13.47□□□□□ -0.25
NEK9-201ENST00000238616 HSD17B3P37058 310 aa13.47□□□□□ -0.25
NEK9-201ENST00000238616 CCT3P49368 545 aaKnown RBP13.47□□□□□ -0.25
NEK9-201ENST00000238616 TKTL1P51854 596 aa13.47□□□□□ -0.25
NEK9-201ENST00000238616 ZNHIT3Q15649 155 aaPredicted RBP13.47□□□□□ -0.25
NEK9-201ENST00000238616 LY6KQ17RY6 165 aa13.47□□□□□ -0.25
NEK9-201ENST00000238616 PDPK2PQ6A1A2 396 aa13.47□□□□□ -0.25
NEK9-201ENST00000238616 LRRC6Q86X45 466 aa13.47□□□□□ -0.25
NEK9-201ENST00000238616 GRIP2Q9C0E4 1043 aa13.47□□□□□ -0.25
NEK9-201ENST00000238616 RBM22Q9NW64 420 aaKnown RBP eCLIP13.47□□□□□ -0.25
NEK9-201ENST00000238616 COMMD9Q9P000 198 aa13.47□□□□□ -0.25
NEK9-201ENST00000238616 TM9SF1O15321 606 aa13.47□□□□□ -0.25
NEK9-201ENST00000238616 XYLBO75191 536 aa13.47□□□□□ -0.25
NEK9-201ENST00000238616 USP17L7P0C7H9 530 aa13.47□□□□□ -0.25
NEK9-201ENST00000238616 FMO4P31512 558 aa13.47□□□□□ -0.25
NEK9-201ENST00000238616 POLR2LP62875 67 aaKnown RBP13.47□□□□□ -0.25
NEK9-201ENST00000238616 FAM50BQ9Y247 325 aa13.47□□□□□ -0.25
NEK9-201ENST00000238616 TPH1P17752 444 aa13.47□□□□□ -0.25
NEK9-201ENST00000238616 FCHO2Q0JRZ9 810 aa13.47□□□□□ -0.25
NEK9-201ENST00000238616 PDIA5Q14554 519 aa13.47□□□□□ -0.25
NEK9-201ENST00000238616 PGBD2Q6P3X8 592 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms