RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 CREMQ03060 361 aa15.68■□□□□ 0.1
HDHD3-201ENST00000238379 HSP90B2PQ58FF3 399 aa15.68■□□□□ 0.1
HDHD3-201ENST00000238379 UBAP2Q5T6F2 1119 aaKnown RBP15.68■□□□□ 0.1
HDHD3-201ENST00000238379 HOOK3Q86VS8 718 aa15.68■□□□□ 0.1
HDHD3-201ENST00000238379 MIB1Q86YT6 1006 aa15.68■□□□□ 0.1
HDHD3-201ENST00000238379 RELL1Q8IUW5 271 aa15.68■□□□□ 0.1
HDHD3-201ENST00000238379 TAB3Q8N5C8 712 aaPredicted RBP15.68■□□□□ 0.1
HDHD3-201ENST00000238379 HTR3CQ8WXA8 447 aa15.68■□□□□ 0.1
HDHD3-201ENST00000238379 TRMT2BQ96GJ1 504 aaKnown RBP15.68■□□□□ 0.1
HDHD3-201ENST00000238379 SSX2IPQ9Y2D8 614 aa15.68■□□□□ 0.1
HDHD3-201ENST00000238379 TLL1O43897 1013 aa15.68■□□□□ 0.1
HDHD3-201ENST00000238379 NUDT17P0C025 328 aa15.68■□□□□ 0.1
HDHD3-201ENST00000238379 ELF1P32519 619 aa15.68■□□□□ 0.1
HDHD3-201ENST00000238379 SLC29A2Q14542 456 aa15.68■□□□□ 0.1
HDHD3-201ENST00000238379 PIK3R6Q5UE93 754 aa15.68■□□□□ 0.1
HDHD3-201ENST00000238379 ANKRD22Q5VYY1 191 aa15.68■□□□□ 0.1
HDHD3-201ENST00000238379 HEATR6Q6AI08 1181 aaKnown RBP15.68■□□□□ 0.1
HDHD3-201ENST00000238379 TRMT10CQ7L0Y3 403 aaKnown RBP15.68■□□□□ 0.1
HDHD3-201ENST00000238379 OR2W6PQ8NHA6 318 aa15.68■□□□□ 0.1
HDHD3-201ENST00000238379 CCDC110Q8TBZ0 833 aa15.68■□□□□ 0.1
HDHD3-201ENST00000238379 ZNF512Q96ME7 567 aaPredicted RBP15.68■□□□□ 0.1
HDHD3-201ENST00000238379 RUFY1Q96T51 708 aa15.68■□□□□ 0.1
HDHD3-201ENST00000238379 KLC2Q9H0B6 622 aa15.68■□□□□ 0.1
HDHD3-201ENST00000238379 CDC42EP4Q9H3Q1 356 aaKnown RBP15.68■□□□□ 0.1
HDHD3-201ENST00000238379 DNAJC17Q9NVM6 304 aaKnown RBP15.68■□□□□ 0.1
HDHD3-201ENST00000238379 ZMYND8Q9ULU4 1186 aaPredicted RBP15.68■□□□□ 0.1
HDHD3-201ENST00000238379 INSL5Q9Y5Q6 135 aa15.68■□□□□ 0.1
HDHD3-201ENST00000238379 NR2E3Q9Y5X4 410 aa15.68■□□□□ 0.1
HDHD3-201ENST00000238379 TCRBV7S3A2A0A539 114 aa15.67■□□□□ 0.1
HDHD3-201ENST00000238379 SLC12A8A0AV02 714 aa15.67■□□□□ 0.1
HDHD3-201ENST00000238379 PPP1R12AO14974 1030 aaPredicted RBP15.67■□□□□ 0.1
HDHD3-201ENST00000238379 NCAM2O15394 837 aa15.67■□□□□ 0.1
HDHD3-201ENST00000238379 RIPK2O43353 540 aa15.67■□□□□ 0.1
HDHD3-201ENST00000238379 OPA1O60313 960 aa15.67■□□□□ 0.1
HDHD3-201ENST00000238379 APOEP02649 317 aa15.67■□□□□ 0.1
HDHD3-201ENST00000238379 ACTN2P35609 894 aa15.67■□□□□ 0.1
HDHD3-201ENST00000238379 BMPR1AP36894 532 aa15.67■□□□□ 0.1
HDHD3-201ENST00000238379 CBX1P83916 185 aa15.67■□□□□ 0.1
HDHD3-201ENST00000238379 RING1Q06587 406 aa15.67■□□□□ 0.1
HDHD3-201ENST00000238379 TWF1Q12792 350 aa15.67■□□□□ 0.1
HDHD3-201ENST00000238379 VEPH1Q14D04 833 aa15.67■□□□□ 0.1
HDHD3-201ENST00000238379 RWDD4Q6NW29 188 aaKnown RBP15.67■□□□□ 0.1
HDHD3-201ENST00000238379 C14orf80Q86SX3 495 aa15.67■□□□□ 0.1
HDHD3-201ENST00000238379 TBC1D31Q96DN5 1066 aa15.67■□□□□ 0.1
HDHD3-201ENST00000238379 P2RY11Q96G91 374 aa15.67■□□□□ 0.1
HDHD3-201ENST00000238379 CDK5RAP1Q96SZ6 601 aaKnown RBP15.67■□□□□ 0.1
HDHD3-201ENST00000238379 RBM15Q96T37 977 aaKnown RBP eCLIP15.67■□□□□ 0.14e-7■■■■■ 29.7
HDHD3-201ENST00000238379 RAB6BQ9NRW1 208 aa15.67■□□□□ 0.1
HDHD3-201ENST00000238379 LAMA2P24043 3122 aaKnown RBP15.67■□□□□ 0.1
HDHD3-201ENST00000238379 E9PAM4 449 aa15.66■□□□□ 0.1
HDHD3-201ENST00000238379 SMAPO00193 183 aa15.66■□□□□ 0.1
HDHD3-201ENST00000238379 FGF10O15520 208 aaPredicted RBP15.66■□□□□ 0.1
HDHD3-201ENST00000238379 TMEM63AO94886 807 aa15.66■□□□□ 0.1
HDHD3-201ENST00000238379 CXCL14O95715 111 aa15.66■□□□□ 0.1
HDHD3-201ENST00000238379 SERPINB6P35237 376 aa15.66■□□□□ 0.1
HDHD3-201ENST00000238379 ATP5C1P36542 298 aaKnown RBP15.66■□□□□ 0.1
HDHD3-201ENST00000238379 BASP1P80723 227 aaKnown RBP15.66■□□□□ 0.1
HDHD3-201ENST00000238379 GAD2Q05329 585 aa15.66■□□□□ 0.1
HDHD3-201ENST00000238379 ZNF844Q08AG5 666 aa15.66■□□□□ 0.1
HDHD3-201ENST00000238379 GALNT2Q10471 571 aa15.66■□□□□ 0.1
HDHD3-201ENST00000238379 MS4A13Q5J8X5 152 aa15.66■□□□□ 0.1
HDHD3-201ENST00000238379 LILRA6Q6PI73 481 aa15.66■□□□□ 0.1
HDHD3-201ENST00000238379 C4orf22Q6V702 233 aa15.66■□□□□ 0.1
HDHD3-201ENST00000238379 CEP128Q6ZU80 1094 aa15.66■□□□□ 0.1
HDHD3-201ENST00000238379 TMC7Q7Z402 723 aa15.66■□□□□ 0.1
HDHD3-201ENST00000238379 DNAJB7Q7Z6W7 309 aaPredicted RBP15.66■□□□□ 0.1
HDHD3-201ENST00000238379 ZNF683Q8IZ20 524 aa15.66■□□□□ 0.1
HDHD3-201ENST00000238379 ATP6V0D2Q8N8Y2 350 aa15.66■□□□□ 0.1
HDHD3-201ENST00000238379 CCNYQ8ND76 341 aa15.66■□□□□ 0.1
HDHD3-201ENST00000238379 BTN2A3PQ96KV6 586 aa15.66■□□□□ 0.1
HDHD3-201ENST00000238379 GOLGA8MH3BSY2 632 aa15.66■□□□□ 0.1
HDHD3-201ENST00000238379 TGM5O43548 720 aa15.66■□□□□ 0.1
HDHD3-201ENST00000238379 TTC4O95801 387 aa15.66■□□□□ 0.1
HDHD3-201ENST00000238379 SHBGP04278 402 aa15.66■□□□□ 0.1
HDHD3-201ENST00000238379 SPATA31D3P0C874 917 aa15.66■□□□□ 0.1
HDHD3-201ENST00000238379 TUBP50607 506 aa15.66■□□□□ 0.1
HDHD3-201ENST00000238379 KPNA1P52294 538 aaPredicted RBP15.66■□□□□ 0.1
HDHD3-201ENST00000238379 EPHB3P54753 998 aa15.66■□□□□ 0.1
HDHD3-201ENST00000238379 AP1B1Q10567 949 aa15.66■□□□□ 0.1
HDHD3-201ENST00000238379 KCNJ11Q14654 390 aa15.66■□□□□ 0.1
HDHD3-201ENST00000238379 HECTD3Q5T447 861 aa15.66■□□□□ 0.1
HDHD3-201ENST00000238379 DENND2CQ68D51 928 aa15.66■□□□□ 0.1
HDHD3-201ENST00000238379 KLHDC10Q6PID8 442 aa15.66■□□□□ 0.1
HDHD3-201ENST00000238379 SPATA31D4Q6ZUB0 917 aa15.66■□□□□ 0.1
HDHD3-201ENST00000238379 PSMG2Q969U7 264 aa15.66■□□□□ 0.1
HDHD3-201ENST00000238379 HTATIP2Q9BUP3 242 aa15.66■□□□□ 0.1
HDHD3-201ENST00000238379 BRD8Q9H0E9 1235 aa15.66■□□□□ 0.1
HDHD3-201ENST00000238379 CATSPERBQ9H7T0 1116 aa15.66■□□□□ 0.1
HDHD3-201ENST00000238379 ALG13Q9NP73 1137 aaKnown RBP15.66■□□□□ 0.1
HDHD3-201ENST00000238379 TRPM5Q9NZQ8 1165 aa15.66■□□□□ 0.1
HDHD3-201ENST00000238379 SLC12A6Q9UHW9 1150 aa15.66■□□□□ 0.1
HDHD3-201ENST00000238379 DNMT3LQ9UJW3 386 aa15.66■□□□□ 0.1
HDHD3-201ENST00000238379 LZTS1Q9Y250 596 aa15.66■□□□□ 0.1
HDHD3-201ENST00000238379 HBS1LQ9Y450 684 aaKnown RBP15.66■□□□□ 0.1
HDHD3-201ENST00000238379 PLXNA4Q9HCM2 1894 aa15.65■□□□□ 0.1
HDHD3-201ENST00000238379 A0A0A0MRY4 1105 aa15.65■□□□□ 0.1
HDHD3-201ENST00000238379 CHADO15335 359 aa15.65■□□□□ 0.1
HDHD3-201ENST00000238379 METTL18O95568 372 aa15.65■□□□□ 0.1
HDHD3-201ENST00000238379 MX2P20592 715 aa15.65■□□□□ 0.1
HDHD3-201ENST00000238379 MAGEA6P43360 314 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms