RNA–Protein interactions for RNA: ENST00000233025.11

SPCS1-201, Transcript of signal peptidase complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPCS1, Length 1,082 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1-201ENST00000233025 CALML4Q96GE6 196 aa17.18■□□□□ 0.34
SPCS1-201ENST00000233025 SERAC1Q96JX3 654 aa17.18■□□□□ 0.34
SPCS1-201ENST00000233025 CCNL2Q96S94 520 aaPredicted RBP17.18■□□□□ 0.34
SPCS1-201ENST00000233025 SEMA3CQ99985 751 aa17.18■□□□□ 0.34
SPCS1-201ENST00000233025 FBXL12Q9NXK8 326 aa17.18■□□□□ 0.34
SPCS1-201ENST00000233025 SCML1Q9UN30 329 aa17.18■□□□□ 0.34
SPCS1-201ENST00000233025 NCKAP1Q9Y2A7 1128 aa17.18■□□□□ 0.34
SPCS1-201ENST00000233025 SCN8AQ9UQD0 1980 aa17.18■□□□□ 0.34
SPCS1-201ENST00000233025 A0A1W2PQH9 124 aa17.17■□□□□ 0.34
SPCS1-201ENST00000233025 LRRC72A6NJI9 287 aa17.17■□□□□ 0.34
SPCS1-201ENST00000233025 ITGB2P05107 769 aa17.17■□□□□ 0.34
SPCS1-201ENST00000233025 CKMT1AP12532 417 aa17.17■□□□□ 0.34
SPCS1-201ENST00000233025 HOXD9P28356 352 aaPredicted RBP17.17■□□□□ 0.34
SPCS1-201ENST00000233025 ISXQ2M1V0 245 aa17.17■□□□□ 0.34
SPCS1-201ENST00000233025 SLC45A4Q5BKX6 768 aa17.17■□□□□ 0.34
SPCS1-201ENST00000233025 ADIPOR2Q86V24 386 aa17.17■□□□□ 0.34
SPCS1-201ENST00000233025 CBWD2Q8IUF1 395 aa17.17■□□□□ 0.34
SPCS1-201ENST00000233025 FAM217AQ8IXS0 508 aa17.17■□□□□ 0.34
SPCS1-201ENST00000233025 OR4C6Q8NH72 309 aa17.17■□□□□ 0.34
SPCS1-201ENST00000233025 LARP4BQ92615 738 aaKnown RBP17.17■□□□□ 0.34
SPCS1-201ENST00000233025 MRPL44Q9H9J2 332 aaKnown RBP17.17■□□□□ 0.34
SPCS1-201ENST00000233025 UPF2Q9HAU5 1272 aaKnown RBP17.17■□□□□ 0.34
SPCS1-201ENST00000233025 AGO1Q9UL18 857 aaKnown RBP17.17■□□□□ 0.34
SPCS1-201ENST00000233025 PLA2G4CQ9UP65 541 aa17.17■□□□□ 0.34
SPCS1-201ENST00000233025 SMC3Q9UQE7 1217 aa17.17■□□□□ 0.34
SPCS1-201ENST00000233025 RP1L1Q8IWN7 2480 aaPredicted RBP17.16■□□□□ 0.34
SPCS1-201ENST00000233025 A0A1W2PP55 124 aa17.16■□□□□ 0.34
SPCS1-201ENST00000233025 CYBBP04839 570 aa17.16■□□□□ 0.34
SPCS1-201ENST00000233025 GP1BAP07359 652 aa17.16■□□□□ 0.34
SPCS1-201ENST00000233025 FAM87AP0C7U9 286 aa17.16■□□□□ 0.34
SPCS1-201ENST00000233025 RBMS1P29558 406 aaKnown RBP17.16■□□□□ 0.34
SPCS1-201ENST00000233025 SURF1Q15526 300 aa17.16■□□□□ 0.34
SPCS1-201ENST00000233025 SGO2Q562F6 1265 aa17.16■□□□□ 0.34
SPCS1-201ENST00000233025 CLEC14AQ86T13 490 aa17.16■□□□□ 0.34
SPCS1-201ENST00000233025 MFSD2AQ8NA29 543 aa17.16■□□□□ 0.34
SPCS1-201ENST00000233025 GANCQ8TET4 914 aa17.16■□□□□ 0.34
SPCS1-201ENST00000233025 WFIKKN2Q8TEU8 576 aa17.16■□□□□ 0.34
SPCS1-201ENST00000233025 NEUROG2Q9H2A3 272 aa17.16■□□□□ 0.34
SPCS1-201ENST00000233025 SMYD3Q9H7B4 428 aa17.16■□□□□ 0.34
SPCS1-201ENST00000233025 SEL1LQ9UBV2 794 aa17.16■□□□□ 0.34
SPCS1-201ENST00000233025 ATXN7L1Q9ULK2 861 aaPredicted RBP17.16■□□□□ 0.34
SPCS1-201ENST00000233025 PCDHGA8Q9Y5G5 932 aa17.16■□□□□ 0.34
SPCS1-201ENST00000233025 ITPR3Q14573 2671 aa17.16■□□□□ 0.34
SPCS1-201ENST00000233025 ZFC3H1O60293 1989 aaKnown RBP17.15■□□□□ 0.34
SPCS1-201ENST00000233025 LY6G6EA0A0G2JKS1 128 aa17.15■□□□□ 0.34
SPCS1-201ENST00000233025 PMS2P1A4D2B8 440 aa17.15■□□□□ 0.34
SPCS1-201ENST00000233025 HHLA1C9JL84 531 aa17.15■□□□□ 0.34
SPCS1-201ENST00000233025 LATO43561 262 aa17.15■□□□□ 0.34
SPCS1-201ENST00000233025 KRT38O76015 456 aa17.15■□□□□ 0.34
SPCS1-201ENST00000233025 STAU1O95793 577 aaKnown RBP17.15■□□□□ 0.34
SPCS1-201ENST00000233025 GIMD1P0DJR0 217 aa17.15■□□□□ 0.34
SPCS1-201ENST00000233025 CCDC130P13994 396 aa17.15■□□□□ 0.34
SPCS1-201ENST00000233025 CCR10P46092 362 aa17.15■□□□□ 0.34
SPCS1-201ENST00000233025 MAP3K7CLP57077 242 aa17.15■□□□□ 0.34
SPCS1-201ENST00000233025 NAPEPLDQ6IQ20 393 aa17.15■□□□□ 0.34
SPCS1-201ENST00000233025 CHST9Q7L1S5 443 aa17.15■□□□□ 0.34
SPCS1-201ENST00000233025 KIAA0907Q7Z7F0 614 aaPredicted RBP17.15■□□□□ 0.34
SPCS1-201ENST00000233025 ZNF276Q8N554 614 aa17.15■□□□□ 0.34
SPCS1-201ENST00000233025 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.15■□□□□ 0.34
SPCS1-201ENST00000233025 DDI1Q8WTU0 396 aa17.15■□□□□ 0.34
SPCS1-201ENST00000233025 ARHGAP9Q9BRR9 750 aa17.15■□□□□ 0.34
SPCS1-201ENST00000233025 FGFBP2Q9BYJ0 223 aa17.15■□□□□ 0.34
SPCS1-201ENST00000233025 DCLK3Q9C098 648 aa17.15■□□□□ 0.34
SPCS1-201ENST00000233025 XYLT2Q9H1B5 865 aa17.15■□□□□ 0.34
SPCS1-201ENST00000233025 MTG2Q9H4K7 406 aa17.15■□□□□ 0.34
SPCS1-201ENST00000233025 TBC1D7Q9P0N9 293 aa17.15■□□□□ 0.34
SPCS1-201ENST00000233025 FZD4Q9ULV1 537 aa17.15■□□□□ 0.34
SPCS1-201ENST00000233025 U3KQA8 63 aa17.15■□□□□ 0.34
SPCS1-201ENST00000233025 LRRK1Q38SD2 2015 aa17.14■□□□□ 0.34
SPCS1-201ENST00000233025 MID1O15344 667 aa17.14■□□□□ 0.33
SPCS1-201ENST00000233025 GCNT3O95395 438 aa17.14■□□□□ 0.33
SPCS1-201ENST00000233025 BMP15O95972 392 aa17.14■□□□□ 0.33
SPCS1-201ENST00000233025 DLDP09622 509 aaKnown RBP17.14■□□□□ 0.33
SPCS1-201ENST00000233025 UBA7P41226 1012 aa17.14■□□□□ 0.33
SPCS1-201ENST00000233025 PPP2CBP62714 309 aa17.14■□□□□ 0.33
SPCS1-201ENST00000233025 PPP2CAP67775 309 aa17.14■□□□□ 0.33
SPCS1-201ENST00000233025 EHHADHQ08426 723 aa17.14■□□□□ 0.33
SPCS1-201ENST00000233025 CST6Q15828 149 aa17.14■□□□□ 0.33
SPCS1-201ENST00000233025 TMC6Q7Z403 805 aa17.14■□□□□ 0.33
SPCS1-201ENST00000233025 BRAPQ7Z569 592 aa17.14■□□□□ 0.33
SPCS1-201ENST00000233025 SCD5Q86SK9 330 aa17.14■□□□□ 0.33
SPCS1-201ENST00000233025 IQCHQ86VS3 1027 aa17.14■□□□□ 0.33
SPCS1-201ENST00000233025 DENND1CQ8IV53 801 aa17.14■□□□□ 0.33
SPCS1-201ENST00000233025 SLC2A14Q8TDB8 520 aa17.14■□□□□ 0.33
SPCS1-201ENST00000233025 SGF29Q96ES7 293 aa17.14■□□□□ 0.33
SPCS1-201ENST00000233025 ATXN7L3BQ96GX2 97 aa17.14■□□□□ 0.33
SPCS1-201ENST00000233025 MYO19Q96H55 970 aa17.14■□□□□ 0.33
SPCS1-201ENST00000233025 TNIP3Q96KP6 325 aa17.14■□□□□ 0.33
SPCS1-201ENST00000233025 TPX2Q9ULW0 747 aaKnown RBP17.14■□□□□ 0.33
SPCS1-201ENST00000233025 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.14■□□□□ 0.33
SPCS1-201ENST00000233025 POLQO75417 2590 aa17.13■□□□□ 0.33
SPCS1-201ENST00000233025 ZNF233A6NK53 670 aa17.13■□□□□ 0.33
SPCS1-201ENST00000233025 KIAA0391O15091 583 aaKnown RBP17.13■□□□□ 0.33
SPCS1-201ENST00000233025 RNASEH2AO75792 299 aaKnown RBP17.13■□□□□ 0.33
SPCS1-201ENST00000233025 HMBSP08397 361 aa17.13■□□□□ 0.33
SPCS1-201ENST00000233025 SFTPCP11686 197 aa17.13■□□□□ 0.33
SPCS1-201ENST00000233025 DGKAP23743 735 aa17.13■□□□□ 0.33
SPCS1-201ENST00000233025 LONP1P36776 959 aaKnown RBP17.13■□□□□ 0.33
SPCS1-201ENST00000233025 ADPRHP54922 357 aa17.13■□□□□ 0.33
SPCS1-201ENST00000233025 COG7P83436 770 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms