RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 PHACTR1Q9C0D0 580 aa11.8□□□□□ -0.52
LAMA4-201ENST00000230538 SEMA4AQ9H3S1 761 aa11.8□□□□□ -0.52
LAMA4-201ENST00000230538 NMRAL1Q9HBL8 299 aa11.8□□□□□ -0.52
LAMA4-201ENST00000230538 PTPRHQ9HD43 1115 aa11.8□□□□□ -0.52
LAMA4-201ENST00000230538 ZSCAN5CA6NGD5 496 aaPredicted RBP11.8□□□□□ -0.52
LAMA4-201ENST00000230538 FAM58BPP0C7Q3 252 aa11.8□□□□□ -0.52
LAMA4-201ENST00000230538 NOS3P29474 1203 aa11.8□□□□□ -0.52
LAMA4-201ENST00000230538 NPY2RP49146 381 aa11.8□□□□□ -0.52
LAMA4-201ENST00000230538 TUBP50607 506 aa11.8□□□□□ -0.52
LAMA4-201ENST00000230538 HEATR4Q86WZ0 1026 aa11.8□□□□□ -0.52
LAMA4-201ENST00000230538 HTR3CQ8WXA8 447 aa11.8□□□□□ -0.52
LAMA4-201ENST00000230538 SMARCD1Q96GM5 515 aa11.8□□□□□ -0.52
LAMA4-201ENST00000230538 NSMCE2Q96MF7 247 aa11.8□□□□□ -0.52
LAMA4-201ENST00000230538 TMEM237Q96Q45 408 aa11.8□□□□□ -0.52
LAMA4-201ENST00000230538 MID1IP1Q9NPA3 183 aa11.8□□□□□ -0.52
LAMA4-201ENST00000230538 KANSL3Q9P2N6 904 aa11.8□□□□□ -0.52
LAMA4-201ENST00000230538 NDUFAF1Q9Y375 327 aa11.8□□□□□ -0.52
LAMA4-201ENST00000230538 SNCAIPQ9Y6H5 919 aa11.8□□□□□ -0.52
LAMA4-201ENST00000230538 USP32Q8NFA0 1604 aa11.8□□□□□ -0.52
LAMA4-201ENST00000230538 TBKBP1A7MCY6 615 aa11.8□□□□□ -0.52
LAMA4-201ENST00000230538 DNALI1O14645 258 aaPredicted RBP11.8□□□□□ -0.52
LAMA4-201ENST00000230538 LTFP02788 710 aa11.8□□□□□ -0.52
LAMA4-201ENST00000230538 CNPP09543 421 aaKnown RBP11.8□□□□□ -0.52
LAMA4-201ENST00000230538 AKAP5P24588 427 aa11.8□□□□□ -0.52
LAMA4-201ENST00000230538 GP5P40197 560 aa11.8□□□□□ -0.52
LAMA4-201ENST00000230538 PRKAA2P54646 552 aa11.8□□□□□ -0.52
LAMA4-201ENST00000230538 GLT6D1Q7Z4J2 308 aa11.8□□□□□ -0.52
LAMA4-201ENST00000230538 DEFB128Q7Z7B8 93 aa11.8□□□□□ -0.52
LAMA4-201ENST00000230538 ST13P5Q8NFI4 369 aaPredicted RBP11.8□□□□□ -0.52
LAMA4-201ENST00000230538 SEMA4DQ92854 862 aa11.8□□□□□ -0.52
LAMA4-201ENST00000230538 TMEM159Q96B96 161 aa11.8□□□□□ -0.52
LAMA4-201ENST00000230538 APOPT1Q96IL0 206 aa11.8□□□□□ -0.52
LAMA4-201ENST00000230538 OSBPL6Q9BZF3 934 aa11.8□□□□□ -0.52
LAMA4-201ENST00000230538 ARHGEF3Q9NR81 526 aa11.8□□□□□ -0.52
LAMA4-201ENST00000230538 RRN3Q9NYV6 651 aa11.8□□□□□ -0.52
LAMA4-201ENST00000230538 STARD13Q9Y3M8 1113 aa11.8□□□□□ -0.52
LAMA4-201ENST00000230538 CEMIPQ8WUJ3 1361 aa11.8□□□□□ -0.52
LAMA4-201ENST00000230538 MAPK9P45984 424 aa11.8□□□□□ -0.52
LAMA4-201ENST00000230538 NR2C2P49116 596 aa11.8□□□□□ -0.52
LAMA4-201ENST00000230538 CSNK2BP67870 215 aa11.8□□□□□ -0.52
LAMA4-201ENST00000230538 MTA1Q13330 715 aa11.8□□□□□ -0.52
LAMA4-201ENST00000230538 ATAD3BQ5T9A4 648 aa11.8□□□□□ -0.52
LAMA4-201ENST00000230538 CASP12Q6UXS9 341 aa11.8□□□□□ -0.52
LAMA4-201ENST00000230538 NEK10Q6ZWH5 1172 aa11.8□□□□□ -0.52
LAMA4-201ENST00000230538 DHFR2Q86XF0 187 aa11.8□□□□□ -0.52
LAMA4-201ENST00000230538 NT5DC4Q86YG4 428 aa11.8□□□□□ -0.52
LAMA4-201ENST00000230538 SPATA31A5Q5VU36 1347 aa11.8□□□□□ -0.52
LAMA4-201ENST00000230538 SPATA31A7Q8IWB4 1347 aa11.8□□□□□ -0.52
LAMA4-201ENST00000230538 ZNF839A8K0R7 811 aa11.8□□□□□ -0.52
LAMA4-201ENST00000230538 PABPC1P11940 636 aaKnown RBP11.8□□□□□ -0.52
LAMA4-201ENST00000230538 ATP6V1C1P21283 382 aa11.8□□□□□ -0.52
LAMA4-201ENST00000230538 ACAT1P24752 427 aaKnown RBP11.8□□□□□ -0.52
LAMA4-201ENST00000230538 PTPN3P26045 913 aa11.8□□□□□ -0.52
LAMA4-201ENST00000230538 FLT3P36888 993 aa11.8□□□□□ -0.52
LAMA4-201ENST00000230538 ATN1P54259 1190 aaPredicted RBP11.8□□□□□ -0.52
LAMA4-201ENST00000230538 ELAVL2Q12926 359 aaKnown RBP11.8□□□□□ -0.52
LAMA4-201ENST00000230538 ZNF268Q14587 947 aaPredicted RBP11.8□□□□□ -0.52
LAMA4-201ENST00000230538 EARS2Q5JPH6 523 aaKnown RBP11.8□□□□□ -0.52
LAMA4-201ENST00000230538 SYTL1Q8IYJ3 562 aa11.8□□□□□ -0.52
LAMA4-201ENST00000230538 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.8□□□□□ -0.52
LAMA4-201ENST00000230538 OSCP1Q8WVF1 389 aa11.8□□□□□ -0.52
LAMA4-201ENST00000230538 DNAJB3Q8WWF6 145 aa11.8□□□□□ -0.52
LAMA4-201ENST00000230538 NACC2Q96BF6 587 aa11.8□□□□□ -0.52
LAMA4-201ENST00000230538 BDH2Q9BUT1 245 aa11.8□□□□□ -0.52
LAMA4-201ENST00000230538 ATP6V1HQ9UI12 483 aa11.8□□□□□ -0.52
LAMA4-201ENST00000230538 DMGDHQ9UI17 866 aaKnown RBP11.8□□□□□ -0.52
LAMA4-201ENST00000230538 CPA4Q9UI42 421 aa11.8□□□□□ -0.52
LAMA4-201ENST00000230538 H3BRB1 525 aa11.79□□□□□ -0.52
LAMA4-201ENST00000230538 SEC22BO75396 215 aa11.79□□□□□ -0.52
LAMA4-201ENST00000230538 BMP10O95393 424 aa11.79□□□□□ -0.52
LAMA4-201ENST00000230538 ZNF7P17097 686 aaPredicted RBP11.79□□□□□ -0.52
LAMA4-201ENST00000230538 RAB27AP51159 221 aa11.79□□□□□ -0.52
LAMA4-201ENST00000230538 RSBN1Q5VWQ0 802 aaPredicted RBP11.79□□□□□ -0.52
LAMA4-201ENST00000230538 SLC5A5Q92911 643 aa11.79□□□□□ -0.52
LAMA4-201ENST00000230538 ZBTB10Q96DT7 871 aa11.79□□□□□ -0.52
LAMA4-201ENST00000230538 MTMR8Q96EF0 704 aa11.79□□□□□ -0.52
LAMA4-201ENST00000230538 SIKE1Q9BRV8 207 aa11.79□□□□□ -0.52
LAMA4-201ENST00000230538 NLNQ9BYT8 704 aa11.79□□□□□ -0.52
LAMA4-201ENST00000230538 PRKD2Q9BZL6 878 aa11.79□□□□□ -0.52
LAMA4-201ENST00000230538 TUT1Q9H6E5 874 aaKnown RBP11.79□□□□□ -0.52
LAMA4-201ENST00000230538 ATP13A1Q9HD20 1204 aa11.79□□□□□ -0.52
LAMA4-201ENST00000230538 A1CFQ9NQ94 594 aaKnown RBP11.79□□□□□ -0.52
LAMA4-201ENST00000230538 PCDHA3Q9Y5H8 950 aa11.79□□□□□ -0.52
LAMA4-201ENST00000230538 RBAK-RBAKDNI3L0D1 243 aa11.79□□□□□ -0.52
LAMA4-201ENST00000230538 BOP1Q14137 746 aaKnown RBP11.79□□□□□ -0.52
LAMA4-201ENST00000230538 OR56A4Q8NGH8 313 aa11.79□□□□□ -0.52
LAMA4-201ENST00000230538 TCP10LQ8TDR4 215 aa11.79□□□□□ -0.52
LAMA4-201ENST00000230538 PIPSLA2A3N6 862 aa11.79□□□□□ -0.52
LAMA4-201ENST00000230538 OR56A5P0C7T3 313 aa11.79□□□□□ -0.52
LAMA4-201ENST00000230538 INSRRP14616 1297 aa11.79□□□□□ -0.52
LAMA4-201ENST00000230538 SGCGQ13326 291 aa11.79□□□□□ -0.52
LAMA4-201ENST00000230538 C16orf72Q14CZ0 275 aa11.79□□□□□ -0.52
LAMA4-201ENST00000230538 GDPD5Q8WTR4 605 aa11.79□□□□□ -0.52
LAMA4-201ENST00000230538 BTBD10Q9BSF8 475 aa11.79□□□□□ -0.52
LAMA4-201ENST00000230538 THAP1Q9NVV9 213 aa11.79□□□□□ -0.52
LAMA4-201ENST00000230538 TRHDEQ9UKU6 1024 aa11.79□□□□□ -0.52
LAMA4-201ENST00000230538 INPP4BO15327 924 aa11.79□□□□□ -0.52
LAMA4-201ENST00000230538 VIL1P09327 827 aaKnown RBP11.79□□□□□ -0.52
LAMA4-201ENST00000230538 AMPD1P23109 780 aa11.79□□□□□ -0.52
LAMA4-201ENST00000230538 ACOX1Q15067 660 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms