RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 ANO4Q32M45 955 aa24.43■■□□□ 1.5
HOMER3-201ENST00000221222 MPP7Q5T2T1 576 aa24.43■■□□□ 1.5
HOMER3-201ENST00000221222 SCYL2Q6P3W7 929 aa24.43■■□□□ 1.5
HOMER3-201ENST00000221222 RFWD3Q6PCD5 774 aa24.43■■□□□ 1.5
HOMER3-201ENST00000221222 SLFN11Q7Z7L1 901 aa24.43■■□□□ 1.5
HOMER3-201ENST00000221222 KIAA1328Q86T90 577 aa24.43■■□□□ 1.5
HOMER3-201ENST00000221222 PRICKLE1Q96MT3 831 aaPredicted RBP24.43■■□□□ 1.5
HOMER3-201ENST00000221222 LACRTQ9GZZ8 138 aa24.43■■□□□ 1.5
HOMER3-201ENST00000221222 OSBPL2Q9H1P3 480 aa24.43■■□□□ 1.5
HOMER3-201ENST00000221222 MFSD1Q9H3U5 465 aa24.43■■□□□ 1.5
HOMER3-201ENST00000221222 MIA3Q5JRA6 1907 aa24.43■■□□□ 1.5
HOMER3-201ENST00000221222 SHISA7A6NL88 538 aa24.42■■□□□ 1.5
HOMER3-201ENST00000221222 NEDD8-MDP1E9PL57 170 aa24.42■■□□□ 1.5
HOMER3-201ENST00000221222 F5H5T6 163 aa24.42■■□□□ 1.5
HOMER3-201ENST00000221222 TSPAN3O60637 253 aa24.42■■□□□ 1.5
HOMER3-201ENST00000221222 TYRP14679 529 aa24.42■■□□□ 1.5
HOMER3-201ENST00000221222 STARD6P59095 220 aa24.42■■□□□ 1.5
HOMER3-201ENST00000221222 AUHQ13825 339 aaKnown RBP24.42■■□□□ 1.5
HOMER3-201ENST00000221222 RNF43Q68DV7 783 aa24.42■■□□□ 1.5
HOMER3-201ENST00000221222 TPRG1Q6ZUI0 275 aa24.42■■□□□ 1.5
HOMER3-201ENST00000221222 ETFBKMTQ8IXQ9 262 aa24.42■■□□□ 1.5
HOMER3-201ENST00000221222 TMA16Q96EY4 203 aaKnown RBP24.42■■□□□ 1.5
HOMER3-201ENST00000221222 SHDQ96IW2 340 aa24.42■■□□□ 1.5
HOMER3-201ENST00000221222 FZD10Q9ULW2 581 aa24.42■■□□□ 1.5
HOMER3-201ENST00000221222 MAN2B1O00754 1011 aa24.42■■□□□ 1.5
HOMER3-201ENST00000221222 PRPSAP2O60256 369 aa24.42■■□□□ 1.5
HOMER3-201ENST00000221222 CACNG3O60359 315 aa24.42■■□□□ 1.5
HOMER3-201ENST00000221222 EIF2DP41214 584 aaKnown RBP24.42■■□□□ 1.5
HOMER3-201ENST00000221222 NRG1Q02297 640 aaPredicted RBP24.42■■□□□ 1.5
HOMER3-201ENST00000221222 C5orf22Q49AR2 442 aa24.42■■□□□ 1.5
HOMER3-201ENST00000221222 CYP4V2Q6ZWL3 525 aaPredicted RBP24.42■■□□□ 1.5
HOMER3-201ENST00000221222 ZNF683Q8IZ20 524 aa24.42■■□□□ 1.5
HOMER3-201ENST00000221222 LGI2Q8N0V4 545 aa24.42■■□□□ 1.5
HOMER3-201ENST00000221222 SIX5Q8N196 739 aa24.42■■□□□ 1.5
HOMER3-201ENST00000221222 TMEM105Q8N8V8 129 aa24.42■■□□□ 1.5
HOMER3-201ENST00000221222 HJURPQ8NCD3 748 aaPredicted RBP24.42■■□□□ 1.5
HOMER3-201ENST00000221222 DDI1Q8WTU0 396 aa24.42■■□□□ 1.5
HOMER3-201ENST00000221222 MYEOVQ96EZ4 313 aa24.42■■□□□ 1.5
HOMER3-201ENST00000221222 CALR3Q96L12 384 aaKnown RBP24.42■■□□□ 1.5
HOMER3-201ENST00000221222 PEBP4Q96S96 227 aa24.42■■□□□ 1.5
HOMER3-201ENST00000221222 SIK2Q9H0K1 926 aa24.42■■□□□ 1.5
HOMER3-201ENST00000221222 USP18Q9UMW8 372 aa24.42■■□□□ 1.5
HOMER3-201ENST00000221222 HOXD9P28356 352 aaPredicted RBP24.41■■□□□ 1.5
HOMER3-201ENST00000221222 OPRD1P41143 372 aa24.41■■□□□ 1.5
HOMER3-201ENST00000221222 NOP2P46087 812 aaKnown RBP24.41■■□□□ 1.5
HOMER3-201ENST00000221222 SGSHP51688 502 aa24.41■■□□□ 1.5
HOMER3-201ENST00000221222 KIF5AQ12840 1032 aa24.41■■□□□ 1.5
HOMER3-201ENST00000221222 MESDQ14696 234 aa24.41■■□□□ 1.5
HOMER3-201ENST00000221222 EFHC2Q5JST6 749 aa24.41■■□□□ 1.5
HOMER3-201ENST00000221222 DAB2IPQ5VWQ8 1189 aa24.41■■□□□ 1.5
HOMER3-201ENST00000221222 FBXL22Q6P050 247 aa24.41■■□□□ 1.5
HOMER3-201ENST00000221222 TXNDC11Q6PKC3 985 aa24.41■■□□□ 1.5
HOMER3-201ENST00000221222 PSTKQ8IV42 348 aaKnown RBP24.41■■□□□ 1.5
HOMER3-201ENST00000221222 KCNF1Q9H3M0 494 aa24.41■■□□□ 1.5
HOMER3-201ENST00000221222 PLK2Q9NYY3 685 aa24.41■■□□□ 1.5
HOMER3-201ENST00000221222 PCSK1NQ9UHG2 260 aa24.41■■□□□ 1.5
HOMER3-201ENST00000221222 SALL4Q9UJQ4 1053 aa24.41■■□□□ 1.5
HOMER3-201ENST00000221222 DUSP10Q9Y6W6 482 aa24.41■■□□□ 1.5
HOMER3-201ENST00000221222 DOCK4Q8N1I0 1966 aa24.41■■□□□ 1.5
HOMER3-201ENST00000221222 H0Y858 1186 aa24.4■■□□□ 1.5
HOMER3-201ENST00000221222 GGCXP38435 758 aa24.4■■□□□ 1.5
HOMER3-201ENST00000221222 RABGAP1LQ5R372 815 aa24.4■■□□□ 1.5
HOMER3-201ENST00000221222 ARTNQ5T4W7 220 aa24.4■■□□□ 1.5
HOMER3-201ENST00000221222 ERMARDQ5T6L9 678 aa24.4■■□□□ 1.5
HOMER3-201ENST00000221222 TTC39BQ5VTQ0 682 aaPredicted RBP24.4■■□□□ 1.5
HOMER3-201ENST00000221222 ZNF852Q6ZMS4 543 aa24.4■■□□□ 1.5
HOMER3-201ENST00000221222 C14orf80Q86SX3 495 aa24.4■■□□□ 1.5
HOMER3-201ENST00000221222 C12orf40Q86WS4 652 aa24.4■■□□□ 1.5
HOMER3-201ENST00000221222 FLCNQ8NFG4 579 aa24.4■■□□□ 1.5
HOMER3-201ENST00000221222 BHMTQ93088 406 aa24.4■■□□□ 1.5
HOMER3-201ENST00000221222 XPO6Q96QU8 1125 aaKnown RBP24.4■■□□□ 1.5
HOMER3-201ENST00000221222 OR12D3Q9UGF7 316 aa24.4■■□□□ 1.5
HOMER3-201ENST00000221222 FBXO10Q9UK96 956 aa24.4■■□□□ 1.5
HOMER3-201ENST00000221222 VANGL2Q9ULK5 521 aa24.4■■□□□ 1.5
HOMER3-201ENST00000221222 SNX10Q9Y5X0 201 aa24.4■■□□□ 1.5
HOMER3-201ENST00000221222 IGLV3-10A0A075B6K4 115 aa24.39■■□□□ 1.49
HOMER3-201ENST00000221222 TYW5A2RUC4 315 aaKnown RBP24.39■■□□□ 1.49
HOMER3-201ENST00000221222 TBL1XO60907 577 aa24.39■■□□□ 1.49
HOMER3-201ENST00000221222 CCDC175P0C221 793 aa24.39■■□□□ 1.49
HOMER3-201ENST00000221222 TCF4P15884 667 aa24.39■■□□□ 1.49
HOMER3-201ENST00000221222 IL1R2P27930 398 aa24.39■■□□□ 1.49
HOMER3-201ENST00000221222 RPS24P62847 133 aaKnown RBP24.39■■□□□ 1.49
HOMER3-201ENST00000221222 SLC25A11Q02978 314 aaKnown RBP24.39■■□□□ 1.49
HOMER3-201ENST00000221222 MANEALQ5VSG8 457 aa24.39■■□□□ 1.49
HOMER3-201ENST00000221222 FAM3CQ92520 227 aa24.39■■□□□ 1.49
HOMER3-201ENST00000221222 ATOH1Q92858 354 aaPredicted RBP24.39■■□□□ 1.49
HOMER3-201ENST00000221222 IGSF8Q969P0 613 aa24.39■■□□□ 1.49
HOMER3-201ENST00000221222 EXOC4Q96A65 974 aa24.39■■□□□ 1.49
HOMER3-201ENST00000221222 RPRD1AQ96P16 312 aaPredicted RBP24.39■■□□□ 1.49
HOMER3-201ENST00000221222 SNRNP25Q9BV90 132 aaKnown RBP24.39■■□□□ 1.49
HOMER3-201ENST00000221222 SLC2A11Q9BYW1 496 aa24.39■■□□□ 1.49
HOMER3-201ENST00000221222 AP4E1Q9UPM8 1137 aa24.39■■□□□ 1.49
HOMER3-201ENST00000221222 A0A0U1RQJ8 604 aa24.38■■□□□ 1.49
HOMER3-201ENST00000221222 DRGXA6NNA5 263 aa24.38■■□□□ 1.49
HOMER3-201ENST00000221222 PALM2-AKAP2B1ALY0 433 aaPredicted RBP24.38■■□□□ 1.49
HOMER3-201ENST00000221222 E9PAM4 449 aa24.38■■□□□ 1.49
HOMER3-201ENST00000221222 TULP3O75386 442 aa24.38■■□□□ 1.49
HOMER3-201ENST00000221222 L1CAMP32004 1257 aa24.38■■□□□ 1.49
HOMER3-201ENST00000221222 BOLA3Q53S33 107 aa24.38■■□□□ 1.49
HOMER3-201ENST00000221222 NAIF1Q69YI7 327 aaPredicted RBP24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms