RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 CWF19L1Q69YN2 538 aaKnown RBP10.28□□□□□ -0.76
USP11-201ENST00000218348 HEATR6Q6AI08 1181 aaKnown RBP10.28□□□□□ -0.76
USP11-201ENST00000218348 UNC93AQ86WB7 457 aa10.28□□□□□ -0.76
USP11-201ENST00000218348 ANKS4BQ8N8V4 417 aa10.28□□□□□ -0.76
USP11-201ENST00000218348 CCDC63Q8NA47 563 aa10.28□□□□□ -0.76
USP11-201ENST00000218348 TTC17Q96AE7 1141 aa10.28□□□□□ -0.76
USP11-201ENST00000218348 PITPNM3Q9BZ71 974 aa10.28□□□□□ -0.76
USP11-201ENST00000218348 RNF208Q9H0X6 261 aa10.28□□□□□ -0.76
USP11-201ENST00000218348 MTMR10Q9NXD2 777 aa10.28□□□□□ -0.76
USP11-201ENST00000218348 DTLQ9NZJ0 730 aa10.28□□□□□ -0.76
USP11-201ENST00000218348 ZC3H7BQ9UGR2 993 aaKnown RBP10.28□□□□□ -0.76
USP11-201ENST00000218348 TRIM33Q9UPN9 1127 aa10.28□□□□□ -0.76
USP11-201ENST00000218348 CCDC195A0A1B0GUA6 201 aa10.27□□□□□ -0.76
USP11-201ENST00000218348 CABYRO75952 493 aa10.27□□□□□ -0.76
USP11-201ENST00000218348 MYCLP1P12525 358 aaPredicted RBP10.27□□□□□ -0.76
USP11-201ENST00000218348 TLDC1Q6P9B6 456 aa10.27□□□□□ -0.76
USP11-201ENST00000218348 SLC26A9Q7LBE3 791 aa10.27□□□□□ -0.76
USP11-201ENST00000218348 SCN4BQ8IWT1 228 aa10.27□□□□□ -0.76
USP11-201ENST00000218348 CRYBG2Q8N1P7 616 aa10.27□□□□□ -0.76
USP11-201ENST00000218348 PCSK9Q8NBP7 692 aaKnown RBP10.27□□□□□ -0.76
USP11-201ENST00000218348 B3GALT6Q96L58 329 aa10.27□□□□□ -0.76
USP11-201ENST00000218348 DUSP16Q9BY84 665 aa10.27□□□□□ -0.76
USP11-201ENST00000218348 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.27□□□□□ -0.76
USP11-201ENST00000218348 PSMC3IPQ9P2W1 217 aaPredicted RBP10.27□□□□□ -0.76
USP11-201ENST00000218348 LNPEPQ9UIQ6 1025 aa10.27□□□□□ -0.76
USP11-201ENST00000218348 TRPV2Q9Y5S1 764 aa10.27□□□□□ -0.76
USP11-201ENST00000218348 MOCS2O96007 188 aaPredicted RBP10.27□□□□□ -0.77
USP11-201ENST00000218348 INHBAP08476 426 aa10.27□□□□□ -0.77
USP11-201ENST00000218348 PTK7Q13308 1070 aa10.27□□□□□ -0.77
USP11-201ENST00000218348 TNFAIP8L3Q5GJ75 292 aa10.27□□□□□ -0.77
USP11-201ENST00000218348 MROH9Q5TGP6 573 aa10.27□□□□□ -0.77
USP11-201ENST00000218348 CROCCP2Q86T23 111 aa10.27□□□□□ -0.77
USP11-201ENST00000218348 RNF180Q86T96 592 aa10.27□□□□□ -0.77
USP11-201ENST00000218348 HACE1Q8IYU2 909 aa10.27□□□□□ -0.77
USP11-201ENST00000218348 RMDN2Q96LZ7 410 aa10.27□□□□□ -0.77
USP11-201ENST00000218348 TTC25Q96NG3 672 aa10.27□□□□□ -0.77
USP11-201ENST00000218348 SMOQ99835 787 aa10.27□□□□□ -0.77
USP11-201ENST00000218348 DERAQ9Y315 318 aa10.27□□□□□ -0.77
USP11-201ENST00000218348 REV3LO60673 3130 aa10.27□□□□□ -0.77
USP11-201ENST00000218348 UBOX5O94941 541 aa10.27□□□□□ -0.77
USP11-201ENST00000218348 KCNE1P15382 129 aa10.27□□□□□ -0.77
USP11-201ENST00000218348 VAV1P15498 845 aa10.27□□□□□ -0.77
USP11-201ENST00000218348 STIP1P31948 543 aaKnown RBP10.27□□□□□ -0.77
USP11-201ENST00000218348 PHBP35232 272 aa10.27□□□□□ -0.77
USP11-201ENST00000218348 PTPN7P35236 360 aa10.27□□□□□ -0.77
USP11-201ENST00000218348 MATKP42679 507 aa10.27□□□□□ -0.77
USP11-201ENST00000218348 MRPS5P82675 430 aaKnown RBP10.27□□□□□ -0.77
USP11-201ENST00000218348 CDC42EP1Q00587 391 aa10.27□□□□□ -0.77
USP11-201ENST00000218348 PDK2Q15119 407 aa10.27□□□□□ -0.77
USP11-201ENST00000218348 ARHGAP17Q68EM7 881 aa10.27□□□□□ -0.77
USP11-201ENST00000218348 RWDD4Q6NW29 188 aaKnown RBP10.27□□□□□ -0.77
USP11-201ENST00000218348 PCGF5Q86SE9 256 aa10.27□□□□□ -0.77
USP11-201ENST00000218348 TBC1D1Q86TI0 1168 aaPredicted RBP10.27□□□□□ -0.77
USP11-201ENST00000218348 TTC16Q8NEE8 873 aa10.27□□□□□ -0.77
USP11-201ENST00000218348 TCP10LQ8TDR4 215 aa10.27□□□□□ -0.77
USP11-201ENST00000218348 PPP1R10Q96QC0 940 aaKnown RBP10.27□□□□□ -0.77
USP11-201ENST00000218348 KLC2Q9H0B6 622 aa10.27□□□□□ -0.77
USP11-201ENST00000218348 TRPV6Q9H1D0 765 aa10.27□□□□□ -0.77
USP11-201ENST00000218348 TMLHEQ9NVH6 421 aa10.27□□□□□ -0.77
USP11-201ENST00000218348 N6AMT1Q9Y5N5 214 aa10.27□□□□□ -0.77
USP11-201ENST00000218348 C2orf71A6NGG8 1288 aa10.26□□□□□ -0.77
USP11-201ENST00000218348 I6L893 689 aaPredicted RBP10.26□□□□□ -0.77
USP11-201ENST00000218348 SMIM24O75264 130 aa10.26□□□□□ -0.77
USP11-201ENST00000218348 MT-ND3P03897 115 aa10.26□□□□□ -0.77
USP11-201ENST00000218348 AXLP30530 894 aa10.26□□□□□ -0.77
USP11-201ENST00000218348 PBX3P40426 434 aa10.26□□□□□ -0.77
USP11-201ENST00000218348 ITGA7Q13683 1181 aa10.26□□□□□ -0.77
USP11-201ENST00000218348 ACAP1Q15027 740 aa10.26□□□□□ -0.77
USP11-201ENST00000218348 TAZQ16635 292 aa10.26□□□□□ -0.77
USP11-201ENST00000218348 C6orf89Q6UWU4 347 aa10.26□□□□□ -0.77
USP11-201ENST00000218348 PID1Q7Z2X4 250 aa10.26□□□□□ -0.77
USP11-201ENST00000218348 RSPH3Q86UC2 560 aa10.26□□□□□ -0.77
USP11-201ENST00000218348 FAM35AQ86V20 835 aa10.26□□□□□ -0.77
USP11-201ENST00000218348 VPS52Q8N1B4 723 aa10.26□□□□□ -0.77
USP11-201ENST00000218348 TTC39CQ8N584 583 aa10.26□□□□□ -0.77
USP11-201ENST00000218348 TMCO5AQ8N6Q1 288 aa10.26□□□□□ -0.77
USP11-201ENST00000218348 RNF139Q8WU17 664 aa10.26□□□□□ -0.77
USP11-201ENST00000218348 CKAP2Q8WWK9 683 aa10.26□□□□□ -0.77
USP11-201ENST00000218348 PRDM12Q9H4Q4 367 aa10.26□□□□□ -0.77
USP11-201ENST00000218348 MICAL3Q7RTP6 2002 aa10.26□□□□□ -0.77
USP11-201ENST00000218348 GOLGA8TH3BQL2 631 aa10.26□□□□□ -0.77
USP11-201ENST00000218348 NDUFB5O43674 189 aa10.26□□□□□ -0.77
USP11-201ENST00000218348 STAU1O95793 577 aaKnown RBP10.26□□□□□ -0.77
USP11-201ENST00000218348 TAC1P20366 129 aa10.26□□□□□ -0.77
USP11-201ENST00000218348 PNPLA4P41247 253 aa10.26□□□□□ -0.77
USP11-201ENST00000218348 PGFP49763 221 aa10.26□□□□□ -0.77
USP11-201ENST00000218348 IL9RQ01113 521 aa10.26□□□□□ -0.77
USP11-201ENST00000218348 MBTPS1Q14703 1052 aa10.26□□□□□ -0.77
USP11-201ENST00000218348 NCBP2-AS2Q69YL0 99 aa10.26□□□□□ -0.77
USP11-201ENST00000218348 TAF2Q6P1X5 1199 aa10.26□□□□□ -0.77
USP11-201ENST00000218348 SLC39A5Q6ZMH5 540 aa10.26□□□□□ -0.77
USP11-201ENST00000218348 CAND1Q86VP6 1230 aaKnown RBP10.26□□□□□ -0.77
USP11-201ENST00000218348 SPNS2Q8IVW8 549 aa10.26□□□□□ -0.77
USP11-201ENST00000218348 IQCF2Q8IXL9 164 aa10.26□□□□□ -0.77
USP11-201ENST00000218348 MYLPFQ96A32 169 aa10.26□□□□□ -0.77
USP11-201ENST00000218348 SERAC1Q96JX3 654 aa10.26□□□□□ -0.77
USP11-201ENST00000218348 FAM111AQ96PZ2 611 aa10.26□□□□□ -0.77
USP11-201ENST00000218348 LBHD1Q9BQE6 289 aaPredicted RBP10.26□□□□□ -0.77
USP11-201ENST00000218348 NSRP1Q9H0G5 558 aaKnown RBP10.26□□□□□ -0.77
USP11-201ENST00000218348 PIDD1Q9HB75 910 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms