RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 EBF3Q9H4W6 596 aa28.16■■■□□ 2.1
CHMP4B-201ENST00000217402 IGSF9Q9P2J2 1179 aa28.16■■■□□ 2.1
CHMP4B-201ENST00000217402 PCDHA3Q9Y5H8 950 aa28.16■■■□□ 2.1
CHMP4B-201ENST00000217402 LRRD1A4D1F6 860 aa28.15■■■□□ 2.1
CHMP4B-201ENST00000217402 MIF4GDA9UHW6 222 aaKnown RBP28.15■■■□□ 2.1
CHMP4B-201ENST00000217402 E9PAM4 449 aa28.15■■■□□ 2.1
CHMP4B-201ENST00000217402 PI4K2BG5E9Z4 385 aa28.15■■■□□ 2.1
CHMP4B-201ENST00000217402 CD48P09326 243 aa28.15■■■□□ 2.1
CHMP4B-201ENST00000217402 SGSHP51688 502 aa28.15■■■□□ 2.1
CHMP4B-201ENST00000217402 TNK2Q07912 1038 aa28.15■■■□□ 2.1
CHMP4B-201ENST00000217402 ODF2Q5BJF6 829 aa28.15■■■□□ 2.1
CHMP4B-201ENST00000217402 UBL4BQ8N7F7 174 aa28.15■■■□□ 2.1
CHMP4B-201ENST00000217402 RAPGEF5Q92565 580 aa28.15■■■□□ 2.1
CHMP4B-201ENST00000217402 HES6Q96HZ4 224 aa28.15■■■□□ 2.1
CHMP4B-201ENST00000217402 RPRD1AQ96P16 312 aaPredicted RBP28.15■■■□□ 2.1
CHMP4B-201ENST00000217402 FAM83CQ9BQN1 747 aa28.15■■■□□ 2.1
CHMP4B-201ENST00000217402 PCDH18Q9HCL0 1135 aa28.15■■■□□ 2.1
CHMP4B-201ENST00000217402 DDX56Q9NY93 547 aaKnown RBP28.15■■■□□ 2.1
CHMP4B-201ENST00000217402 ENC1O14682 589 aa28.14■■■□□ 2.1
CHMP4B-201ENST00000217402 LRIG2O94898 1065 aa28.14■■■□□ 2.1
CHMP4B-201ENST00000217402 PDGFRLQ15198 375 aa28.14■■■□□ 2.1
CHMP4B-201ENST00000217402 LRRC31Q6UY01 552 aa28.14■■■□□ 2.1
CHMP4B-201ENST00000217402 CFAP52Q8N1V2 620 aa28.14■■■□□ 2.1
CHMP4B-201ENST00000217402 CPXM2Q8N436 756 aa28.14■■■□□ 2.1
CHMP4B-201ENST00000217402 ALG3Q92685 438 aa28.14■■■□□ 2.1
CHMP4B-201ENST00000217402 NXPE3Q969Y0 559 aa28.14■■■□□ 2.1
CHMP4B-201ENST00000217402 WDR24Q96S15 920 aa28.14■■■□□ 2.1
CHMP4B-201ENST00000217402 EPAS1Q99814 870 aa28.14■■■□□ 2.1
CHMP4B-201ENST00000217402 CALN1Q9BXU9 219 aa28.14■■■□□ 2.1
CHMP4B-201ENST00000217402 DDX3YO15523 660 aaKnown RBP28.14■■■□□ 2.09
CHMP4B-201ENST00000217402 BMP1P13497 986 aa28.14■■■□□ 2.09
CHMP4B-201ENST00000217402 IRAK1P51617 712 aa28.14■■■□□ 2.09
CHMP4B-201ENST00000217402 SEMA3BQ13214 749 aa28.14■■■□□ 2.09
CHMP4B-201ENST00000217402 RPS6KA1Q15418 735 aa28.14■■■□□ 2.09
CHMP4B-201ENST00000217402 RWDD4Q6NW29 188 aaKnown RBP28.14■■■□□ 2.09
CHMP4B-201ENST00000217402 TMEM25Q86YD3 366 aa28.14■■■□□ 2.09
CHMP4B-201ENST00000217402 KATNAL2Q8IYT4 538 aa28.14■■■□□ 2.09
CHMP4B-201ENST00000217402 ADGRG2Q8IZP9 1017 aa28.14■■■□□ 2.09
CHMP4B-201ENST00000217402 SLC44A3Q8N4M1 653 aa28.14■■■□□ 2.09
CHMP4B-201ENST00000217402 ATP2A3Q93084 1043 aa28.14■■■□□ 2.09
CHMP4B-201ENST00000217402 IGSF8Q969P0 613 aa28.14■■■□□ 2.09
CHMP4B-201ENST00000217402 RNF25Q96BH1 459 aaPredicted RBP28.14■■■□□ 2.09
CHMP4B-201ENST00000217402 C16orf45Q96MC5 204 aaPredicted RBP28.14■■■□□ 2.09
CHMP4B-201ENST00000217402 BRD9Q9H8M2 597 aa28.14■■■□□ 2.09
CHMP4B-201ENST00000217402 KIF26AQ9ULI4 1882 aaPredicted RBP28.13■■■□□ 2.09
CHMP4B-201ENST00000217402 EEF2KO00418 725 aaKnown RBP28.13■■■□□ 2.09
CHMP4B-201ENST00000217402 CHADO15335 359 aa28.13■■■□□ 2.09
CHMP4B-201ENST00000217402 GOT1P17174 413 aa28.13■■■□□ 2.09
CHMP4B-201ENST00000217402 PEX5P50542 639 aa28.13■■■□□ 2.09
CHMP4B-201ENST00000217402 TPI1P60174 286 aa28.13■■■□□ 2.09
CHMP4B-201ENST00000217402 RPS24P62847 133 aaKnown RBP28.13■■■□□ 2.09
CHMP4B-201ENST00000217402 LY6G5CQ5SRR4 150 aa28.13■■■□□ 2.09
CHMP4B-201ENST00000217402 ACBD5Q5T8D3 534 aaPredicted RBP28.13■■■□□ 2.09
CHMP4B-201ENST00000217402 MANEALQ5VSG8 457 aa28.13■■■□□ 2.09
CHMP4B-201ENST00000217402 CIR1Q86X95 450 aaPredicted RBP28.13■■■□□ 2.09
CHMP4B-201ENST00000217402 ZNF683Q8IZ20 524 aa28.13■■■□□ 2.09
CHMP4B-201ENST00000217402 TLR10Q9BXR5 811 aa28.13■■■□□ 2.09
CHMP4B-201ENST00000217402 HPS4Q9NQG7 708 aa28.13■■■□□ 2.09
CHMP4B-201ENST00000217402 SPHK2Q9NRA0 654 aa28.13■■■□□ 2.09
CHMP4B-201ENST00000217402 JRKLQ9Y4A0 524 aa28.13■■■□□ 2.09
CHMP4B-201ENST00000217402 NFATC1O95644 943 aa28.12■■■□□ 2.09
CHMP4B-201ENST00000217402 CYP17A1P05093 508 aa28.12■■■□□ 2.09
CHMP4B-201ENST00000217402 KDELR1P24390 212 aa28.12■■■□□ 2.09
CHMP4B-201ENST00000217402 ARSEP51690 589 aa28.12■■■□□ 2.09
CHMP4B-201ENST00000217402 RWDD2BP57060 319 aa28.12■■■□□ 2.09
CHMP4B-201ENST00000217402 NRG1Q02297 640 aaPredicted RBP28.12■■■□□ 2.09
CHMP4B-201ENST00000217402 DPYSL3Q14195 570 aa28.12■■■□□ 2.09
CHMP4B-201ENST00000217402 ANO4Q32M45 955 aa28.12■■■□□ 2.09
CHMP4B-201ENST00000217402 RABGAP1LQ5R372 815 aa28.12■■■□□ 2.09
CHMP4B-201ENST00000217402 TTC8Q8TAM2 541 aa28.12■■■□□ 2.09
CHMP4B-201ENST00000217402 DDI1Q8WTU0 396 aa28.12■■■□□ 2.09
CHMP4B-201ENST00000217402 IRF7Q92985 503 aa28.12■■■□□ 2.09
CHMP4B-201ENST00000217402 TBC1D31Q96DN5 1066 aa28.12■■■□□ 2.09
CHMP4B-201ENST00000217402 TMA16Q96EY4 203 aaKnown RBP28.12■■■□□ 2.09
CHMP4B-201ENST00000217402 P2RY11Q96G91 374 aa28.12■■■□□ 2.09
CHMP4B-201ENST00000217402 PSMB7Q99436 277 aa28.12■■■□□ 2.09
CHMP4B-201ENST00000217402 PLK2Q9NYY3 685 aa28.12■■■□□ 2.09
CHMP4B-201ENST00000217402 MPP6Q9NZW5 540 aa28.12■■■□□ 2.09
CHMP4B-201ENST00000217402 CWC15Q9P013 229 aaKnown RBP28.12■■■□□ 2.09
CHMP4B-201ENST00000217402 STIM2Q9P246 746 aa28.12■■■□□ 2.09
CHMP4B-201ENST00000217402 GFRA2O00451 464 aa28.11■■■□□ 2.09
CHMP4B-201ENST00000217402 ARL4AP40617 200 aa28.11■■■□□ 2.09
CHMP4B-201ENST00000217402 MMRN1Q13201 1228 aa28.11■■■□□ 2.09
CHMP4B-201ENST00000217402 PDK2Q15119 407 aa28.11■■■□□ 2.09
CHMP4B-201ENST00000217402 DHCR24Q15392 516 aa28.11■■■□□ 2.09
CHMP4B-201ENST00000217402 ARTNQ5T4W7 220 aa28.11■■■□□ 2.09
CHMP4B-201ENST00000217402 RHBDF2Q6PJF5 856 aa28.11■■■□□ 2.09
CHMP4B-201ENST00000217402 CCDC50Q8IVM0 306 aa28.11■■■□□ 2.09
CHMP4B-201ENST00000217402 HJURPQ8NCD3 748 aaPredicted RBP28.11■■■□□ 2.09
CHMP4B-201ENST00000217402 GTSE1Q9NYZ3 720 aa28.11■■■□□ 2.09
CHMP4B-201ENST00000217402 NEU3Q9UQ49 428 aa28.11■■■□□ 2.09
CHMP4B-201ENST00000217402 NEDD8-MDP1E9PL57 170 aa28.1■■■□□ 2.09
CHMP4B-201ENST00000217402 H3BRJ5 948 aa28.1■■■□□ 2.09
CHMP4B-201ENST00000217402 TBL1XO60907 577 aa28.1■■■□□ 2.09
CHMP4B-201ENST00000217402 CYBBP04839 570 aa28.1■■■□□ 2.09
CHMP4B-201ENST00000217402 ATP1A1P05023 1023 aaKnown RBP28.1■■■□□ 2.09
CHMP4B-201ENST00000217402 EPHB2P29323 1055 aa28.1■■■□□ 2.09
CHMP4B-201ENST00000217402 MPPE1Q53F39 396 aa28.1■■■□□ 2.09
CHMP4B-201ENST00000217402 RFX8Q6ZV50 586 aa28.1■■■□□ 2.09
CHMP4B-201ENST00000217402 MAP7D3Q8IWC1 876 aa28.1■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms