RNA–Protein interactions for RNA: ENST00000216605.12

MTHFD1-201, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD1, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-201ENST00000216605 UBOX5O94941 541 aa9.18□□□□□ -0.94
MTHFD1-201ENST00000216605 ITGB1P05556 798 aa9.18□□□□□ -0.94
MTHFD1-201ENST00000216605 OR4Q2P0C623 313 aa9.18□□□□□ -0.94
MTHFD1-201ENST00000216605 GOT1P17174 413 aa9.18□□□□□ -0.94
MTHFD1-201ENST00000216605 PTPN9P43378 593 aa9.18□□□□□ -0.94
MTHFD1-201ENST00000216605 SLC25A52Q3SY17 297 aa9.18□□□□□ -0.94
MTHFD1-201ENST00000216605 PAQR9Q6ZVX9 377 aa9.18□□□□□ -0.94
MTHFD1-201ENST00000216605 MRPL10Q7Z7H8 261 aaKnown RBP9.18□□□□□ -0.94
MTHFD1-201ENST00000216605 ZCCHC9Q8N567 271 aaKnown RBP9.18□□□□□ -0.94
MTHFD1-201ENST00000216605 SMOQ99835 787 aa9.18□□□□□ -0.94
MTHFD1-201ENST00000216605 FERMT1Q9BQL6 677 aa9.18□□□□□ -0.94
MTHFD1-201ENST00000216605 ABCF3Q9NUQ8 709 aa9.18□□□□□ -0.94
MTHFD1-201ENST00000216605 MKS1Q9NXB0 559 aa9.18□□□□□ -0.94
MTHFD1-201ENST00000216605 CTNNAL1Q9UBT7 734 aa9.18□□□□□ -0.94
MTHFD1-201ENST00000216605 PTCH2Q9Y6C5 1203 aa9.18□□□□□ -0.94
MTHFD1-201ENST00000216605 NRP1O14786 923 aa9.18□□□□□ -0.94
MTHFD1-201ENST00000216605 APRTP07741 180 aa9.18□□□□□ -0.94
MTHFD1-201ENST00000216605 KRT15P19012 456 aa9.18□□□□□ -0.94
MTHFD1-201ENST00000216605 ATP5DP30049 168 aa9.18□□□□□ -0.94
MTHFD1-201ENST00000216605 GBE1Q04446 702 aa9.18□□□□□ -0.94
MTHFD1-201ENST00000216605 AP1B1Q10567 949 aa9.18□□□□□ -0.94
MTHFD1-201ENST00000216605 FASTKD3Q14CZ7 662 aaKnown RBP9.18□□□□□ -0.94
MTHFD1-201ENST00000216605 NOMO1Q15155 1222 aa9.18□□□□□ -0.94
MTHFD1-201ENST00000216605 NOMO2Q5JPE7 1267 aa9.18□□□□□ -0.94
MTHFD1-201ENST00000216605 BSPRYQ5W0U4 402 aa9.18□□□□□ -0.94
MTHFD1-201ENST00000216605 HEATR6Q6AI08 1181 aaKnown RBP9.18□□□□□ -0.94
MTHFD1-201ENST00000216605 ZCCHC8Q6NZY4 707 aaKnown RBP9.18□□□□□ -0.94
MTHFD1-201ENST00000216605 RHBDF2Q6PJF5 856 aa9.18□□□□□ -0.94
MTHFD1-201ENST00000216605 LCA5Q86VQ0 697 aa9.18□□□□□ -0.94
MTHFD1-201ENST00000216605 ZNF280BQ86YH2 543 aa9.18□□□□□ -0.94
MTHFD1-201ENST00000216605 APLFQ8IW19 511 aaPredicted RBP9.18□□□□□ -0.94
MTHFD1-201ENST00000216605 SLC43A3Q8NBI5 491 aa9.18□□□□□ -0.94
MTHFD1-201ENST00000216605 SLAIN1Q8ND83 568 aa9.18□□□□□ -0.94
MTHFD1-201ENST00000216605 CCDC110Q8TBZ0 833 aa9.18□□□□□ -0.94
MTHFD1-201ENST00000216605 TEKT4Q8WW24 435 aa9.18□□□□□ -0.94
MTHFD1-201ENST00000216605 ARHGEF2Q92974 986 aaKnown RBP9.18□□□□□ -0.94
MTHFD1-201ENST00000216605 PGLYRP2Q96PD5 576 aa9.18□□□□□ -0.94
MTHFD1-201ENST00000216605 TMEM209Q96SK2 561 aa9.18□□□□□ -0.94
MTHFD1-201ENST00000216605 OSBPL10Q9BXB5 764 aa9.18□□□□□ -0.94
MTHFD1-201ENST00000216605 ROPN1BQ9BZX4 212 aaPredicted RBP9.18□□□□□ -0.94
MTHFD1-201ENST00000216605 EPB41L4BQ9H329 900 aa9.18□□□□□ -0.94
MTHFD1-201ENST00000216605 NRDE2Q9H7Z3 1164 aa9.18□□□□□ -0.94
MTHFD1-201ENST00000216605 ROPN1Q9HAT0 212 aaPredicted RBP9.18□□□□□ -0.94
MTHFD1-201ENST00000216605 GALNT8Q9NY28 637 aa9.18□□□□□ -0.94
MTHFD1-201ENST00000216605 DSEQ9UL01 958 aa9.18□□□□□ -0.94
MTHFD1-201ENST00000216605 PCDHB7Q9Y5E2 793 aa9.18□□□□□ -0.94
MTHFD1-201ENST00000216605 GMEB1Q9Y692 573 aa9.18□□□□□ -0.94
MTHFD1-201ENST00000216605 A0A1B0GVG6 124 aa9.17□□□□□ -0.94
MTHFD1-201ENST00000216605 H3BRJ5 948 aa9.17□□□□□ -0.94
MTHFD1-201ENST00000216605 MDM4O15151 490 aa9.17□□□□□ -0.94
MTHFD1-201ENST00000216605 FBXO21O94952 628 aa9.17□□□□□ -0.94
MTHFD1-201ENST00000216605 UPP2O95045 317 aa9.17□□□□□ -0.94
MTHFD1-201ENST00000216605 RECKO95980 971 aa9.17□□□□□ -0.94
MTHFD1-201ENST00000216605 LTFP02788 710 aa9.17□□□□□ -0.94
MTHFD1-201ENST00000216605 ATP2A2P16615 1042 aaKnown RBP9.17□□□□□ -0.94
MTHFD1-201ENST00000216605 NEK2P51955 445 aa9.17□□□□□ -0.94
MTHFD1-201ENST00000216605 NCALDP61601 193 aa9.17□□□□□ -0.94
MTHFD1-201ENST00000216605 YWHAGP61981 247 aaKnown RBP eCLIP9.17□□□□□ -0.94
MTHFD1-201ENST00000216605 KCNJ2P63252 427 aa9.17□□□□□ -0.94
MTHFD1-201ENST00000216605 MAP7D1Q3KQU3 841 aa9.17□□□□□ -0.94
MTHFD1-201ENST00000216605 SLC39A12Q504Y0 691 aa9.17□□□□□ -0.94
MTHFD1-201ENST00000216605 SMUG1Q53HV7 270 aa9.17□□□□□ -0.94
MTHFD1-201ENST00000216605 ANKRD22Q5VYY1 191 aa9.17□□□□□ -0.94
MTHFD1-201ENST00000216605 DCLRE1AQ6PJP8 1040 aa9.17□□□□□ -0.94
MTHFD1-201ENST00000216605 GPRIN1Q7Z2K8 1008 aa9.17□□□□□ -0.94
MTHFD1-201ENST00000216605 SRRM1Q8IYB3 904 aaKnown RBP9.17□□□□□ -0.94
MTHFD1-201ENST00000216605 PXYLP1Q8TE99 480 aa9.17□□□□□ -0.94
MTHFD1-201ENST00000216605 ANKRD27Q96NW4 1050 aa9.17□□□□□ -0.94
MTHFD1-201ENST00000216605 KCTD15Q96SI1 283 aaPredicted RBP9.17□□□□□ -0.94
MTHFD1-201ENST00000216605 SIK2Q9H0K1 926 aa9.17□□□□□ -0.94
MTHFD1-201ENST00000216605 CYLDQ9NQC7 956 aa9.17□□□□□ -0.94
MTHFD1-201ENST00000216605 EEF2KO00418 725 aaKnown RBP9.17□□□□□ -0.94
MTHFD1-201ENST00000216605 LSM1O15116 133 aaKnown RBP9.17□□□□□ -0.94
MTHFD1-201ENST00000216605 DAB1O75553 588 aa9.17□□□□□ -0.94
MTHFD1-201ENST00000216605 TGM2P21980 687 aa9.17□□□□□ -0.94
MTHFD1-201ENST00000216605 L1CAMP32004 1257 aa9.17□□□□□ -0.94
MTHFD1-201ENST00000216605 CACNA2D1P54289 1103 aa9.17□□□□□ -0.94
MTHFD1-201ENST00000216605 GAD2Q05329 585 aa9.17□□□□□ -0.94
MTHFD1-201ENST00000216605 BNIP1Q12981 228 aa9.17□□□□□ -0.94
MTHFD1-201ENST00000216605 PLEKHG6Q3KR16 790 aa9.17□□□□□ -0.94
MTHFD1-201ENST00000216605 ARL13BQ3SXY8 428 aa9.17□□□□□ -0.94
MTHFD1-201ENST00000216605 RNASEH2BQ5TBB1 312 aaKnown RBP9.17□□□□□ -0.94
MTHFD1-201ENST00000216605 SDE2Q6IQ49 451 aa9.17□□□□□ -0.94
MTHFD1-201ENST00000216605 ARHGEF18Q6ZSZ5 1173 aa9.17□□□□□ -0.94
MTHFD1-201ENST00000216605 LRRC8DQ7L1W4 858 aa9.17□□□□□ -0.94
MTHFD1-201ENST00000216605 STRADAQ7RTN6 431 aa9.17□□□□□ -0.94
MTHFD1-201ENST00000216605 CDKL3Q8IVW4 592 aaPredicted RBP9.17□□□□□ -0.94
MTHFD1-201ENST00000216605 WDR75Q8IWA0 830 aaKnown RBP9.17□□□□□ -0.94
MTHFD1-201ENST00000216605 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.17□□□□□ -0.94
MTHFD1-201ENST00000216605 DBF4BQ8NFT6 615 aa9.17□□□□□ -0.94
MTHFD1-201ENST00000216605 DEFB118Q96PH6 123 aa9.17□□□□□ -0.94
MTHFD1-201ENST00000216605 ZNF670Q9BS34 389 aa9.17□□□□□ -0.94
MTHFD1-201ENST00000216605 FOXP3Q9BZS1 431 aa9.17□□□□□ -0.94
MTHFD1-201ENST00000216605 KLC2Q9H0B6 622 aa9.17□□□□□ -0.94
MTHFD1-201ENST00000216605 ZCWPW1Q9H0M4 648 aa9.17□□□□□ -0.94
MTHFD1-201ENST00000216605 RNF208Q9H0X6 261 aa9.17□□□□□ -0.94
MTHFD1-201ENST00000216605 MLXIPLQ9NP71 852 aa9.17□□□□□ -0.94
MTHFD1-201ENST00000216605 CROTQ9UKG9 612 aa9.17□□□□□ -0.94
MTHFD1-201ENST00000216605 NUDT5Q9UKK9 219 aa9.17□□□□□ -0.94
MTHFD1-201ENST00000216605 SHOC2Q9UQ13 582 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms