RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 CASTOR2A6NHX0 329 aa13.52□□□□□ -0.24
CTNS-201ENST00000046640 PSMG1O95456 288 aa13.52□□□□□ -0.24
CTNS-201ENST00000046640 APOEP02649 317 aa13.52□□□□□ -0.24
CTNS-201ENST00000046640 PTPN1P18031 435 aaKnown RBP13.52□□□□□ -0.24
CTNS-201ENST00000046640 SERPINB4P48594 390 aa13.52□□□□□ -0.24
CTNS-201ENST00000046640 TKTL1P51854 596 aa13.52□□□□□ -0.24
CTNS-201ENST00000046640 CACNA2D1P54289 1103 aa13.52□□□□□ -0.24
CTNS-201ENST00000046640 MAP2K5Q13163 448 aa13.52□□□□□ -0.24
CTNS-201ENST00000046640 COLGALT1Q8NBJ5 622 aa13.52□□□□□ -0.24
CTNS-201ENST00000046640 SHKBP1Q8TBC3 707 aa13.52□□□□□ -0.24
CTNS-201ENST00000046640 TFB1MQ8WVM0 346 aaKnown RBP13.52□□□□□ -0.24
CTNS-201ENST00000046640 CENPIQ92674 756 aaPredicted RBP13.52□□□□□ -0.24
CTNS-201ENST00000046640 OXNAD1Q96HP4 312 aaPredicted RBP13.52□□□□□ -0.24
CTNS-201ENST00000046640 APOPT1Q96IL0 206 aa13.52□□□□□ -0.24
CTNS-201ENST00000046640 ZNF333Q96JL9 665 aa13.52□□□□□ -0.24
CTNS-201ENST00000046640 TTC1Q99614 292 aa13.52□□□□□ -0.24
CTNS-201ENST00000046640 SHCBP1LQ9BZQ2 653 aa13.52□□□□□ -0.24
CTNS-201ENST00000046640 AP5M1Q9H0R1 490 aa13.52□□□□□ -0.24
CTNS-201ENST00000046640 VPS11Q9H270 941 aa13.52□□□□□ -0.24
CTNS-201ENST00000046640 PPCSQ9HAB8 311 aa13.52□□□□□ -0.24
CTNS-201ENST00000046640 SAR1AQ9NR31 198 aa13.52□□□□□ -0.24
CTNS-201ENST00000046640 KRT82Q9NSB4 513 aa13.52□□□□□ -0.24
CTNS-201ENST00000046640 PIGVQ9NUD9 493 aa13.52□□□□□ -0.24
CTNS-201ENST00000046640 SPATS2LQ9NUQ6 558 aaKnown RBP13.52□□□□□ -0.24
CTNS-201ENST00000046640 DDX43Q9NXZ2 648 aaKnown RBP13.52□□□□□ -0.24
CTNS-201ENST00000046640 MYBPHLA2RUH7 354 aa13.52□□□□□ -0.25
CTNS-201ENST00000046640 C17orf102A2RUQ5 167 aa13.52□□□□□ -0.25
CTNS-201ENST00000046640 MEI4A8MW99 385 aa13.52□□□□□ -0.25
CTNS-201ENST00000046640 TM9SF1O15321 606 aa13.52□□□□□ -0.25
CTNS-201ENST00000046640 C1QAP02745 245 aa13.52□□□□□ -0.25
CTNS-201ENST00000046640 DLDP09622 509 aaKnown RBP13.52□□□□□ -0.25
CTNS-201ENST00000046640 SLC18A1P54219 525 aa13.52□□□□□ -0.25
CTNS-201ENST00000046640 IFRD2Q12894 506 aaPredicted RBP13.52□□□□□ -0.25
CTNS-201ENST00000046640 LRRC36Q1X8D7 754 aa13.52□□□□□ -0.25
CTNS-201ENST00000046640 SV2CQ496J9 727 aa13.52□□□□□ -0.25
CTNS-201ENST00000046640 TTC39BQ5VTQ0 682 aaPredicted RBP13.52□□□□□ -0.25
CTNS-201ENST00000046640 LRRC74BQ6ZQY2 392 aa13.52□□□□□ -0.25
CTNS-201ENST00000046640 GPRIN1Q7Z2K8 1008 aa13.52□□□□□ -0.25
CTNS-201ENST00000046640 ZDHHC17Q8IUH5 632 aa13.52□□□□□ -0.25
CTNS-201ENST00000046640 TEX9Q8N6V9 391 aa13.52□□□□□ -0.25
CTNS-201ENST00000046640 TNIP3Q96KP6 325 aa13.52□□□□□ -0.25
CTNS-201ENST00000046640 TSC22D3Q99576 134 aa13.52□□□□□ -0.25
CTNS-201ENST00000046640 THTPAQ9BU02 230 aa13.52□□□□□ -0.25
CTNS-201ENST00000046640 ANLNQ9NQW6 1124 aa13.52□□□□□ -0.25
CTNS-201ENST00000046640 TMEM30AQ9NV96 361 aa13.52□□□□□ -0.25
CTNS-201ENST00000046640 LNPEPQ9UIQ6 1025 aa13.52□□□□□ -0.25
CTNS-201ENST00000046640 DCAF8L1A6NGE4 600 aa13.51□□□□□ -0.25
CTNS-201ENST00000046640 SMAPO00193 183 aa13.51□□□□□ -0.25
CTNS-201ENST00000046640 RNF103O00237 685 aa13.51□□□□□ -0.25
CTNS-201ENST00000046640 SNRPAP09012 282 aaKnown RBP13.51□□□□□ -0.25
CTNS-201ENST00000046640 USP17L7P0C7H9 530 aa13.51□□□□□ -0.25
CTNS-201ENST00000046640 ZCCHC18P0CG32 403 aa13.51□□□□□ -0.25
CTNS-201ENST00000046640 GNAT1P11488 350 aa13.51□□□□□ -0.25
CTNS-201ENST00000046640 CLCNKBP51801 687 aa13.51□□□□□ -0.25
CTNS-201ENST00000046640 PRKD1Q15139 912 aaPredicted RBP13.51□□□□□ -0.25
CTNS-201ENST00000046640 TAF1CQ15572 869 aaPredicted RBP13.51□□□□□ -0.25
CTNS-201ENST00000046640 EFHC1Q5JVL4 640 aa13.51□□□□□ -0.25
CTNS-201ENST00000046640 CXCL17Q6UXB2 119 aa13.51□□□□□ -0.25
CTNS-201ENST00000046640 CLEC20AQ6ZU45 233 aa13.51□□□□□ -0.25
CTNS-201ENST00000046640 TREML1Q86YW5 311 aa13.51□□□□□ -0.25
CTNS-201ENST00000046640 NDUFAF2Q8N183 169 aa13.51□□□□□ -0.25
CTNS-201ENST00000046640 PHC3Q8NDX5 983 aa13.51□□□□□ -0.25
CTNS-201ENST00000046640 RNF217Q8TC41 542 aa13.51□□□□□ -0.25
CTNS-201ENST00000046640 RNF139Q8WU17 664 aa13.51□□□□□ -0.25
CTNS-201ENST00000046640 RTP4Q96DX8 246 aa13.51□□□□□ -0.25
CTNS-201ENST00000046640 P2RY11Q96G91 374 aa13.51□□□□□ -0.25
CTNS-201ENST00000046640 ATXN7L3BQ96GX2 97 aa13.51□□□□□ -0.25
CTNS-201ENST00000046640 DUSP16Q9BY84 665 aa13.51□□□□□ -0.25
CTNS-201ENST00000046640 ULBP1Q9BZM6 244 aa13.51□□□□□ -0.25
CTNS-201ENST00000046640 RRAGCQ9HB90 399 aa13.51□□□□□ -0.25
CTNS-201ENST00000046640 MIOSQ9NXC5 875 aa13.51□□□□□ -0.25
CTNS-201ENST00000046640 FZD10Q9ULW2 581 aa13.51□□□□□ -0.25
CTNS-201ENST00000046640 HTTP42858 3142 aa13.51□□□□□ -0.25
CTNS-201ENST00000046640 CCDC78A2IDD5 438 aa13.51□□□□□ -0.25
CTNS-201ENST00000046640 YJEFN3A6XGL0 299 aa13.51□□□□□ -0.25
CTNS-201ENST00000046640 E7ENQ6 273 aa13.51□□□□□ -0.25
CTNS-201ENST00000046640 TRAFD1O14545 582 aaPredicted RBP13.51□□□□□ -0.25
CTNS-201ENST00000046640 KRT37O76014 449 aa13.51□□□□□ -0.25
CTNS-201ENST00000046640 USP1O94782 785 aa13.51□□□□□ -0.25
CTNS-201ENST00000046640 PGK1P00558 417 aa13.51□□□□□ -0.25
CTNS-201ENST00000046640 NPR3P17342 541 aa13.51□□□□□ -0.25
CTNS-201ENST00000046640 MGAT1P26572 445 aa13.51□□□□□ -0.25
CTNS-201ENST00000046640 PSMB4P28070 264 aa13.51□□□□□ -0.25
CTNS-201ENST00000046640 ETV4P43268 484 aa13.51□□□□□ -0.25
CTNS-201ENST00000046640 POLE2P56282 527 aa13.51□□□□□ -0.25
CTNS-201ENST00000046640 HUNKP57058 714 aa13.51□□□□□ -0.25
CTNS-201ENST00000046640 ADAM17P78536 824 aa13.51□□□□□ -0.25
CTNS-201ENST00000046640 MRPS5P82675 430 aaKnown RBP13.51□□□□□ -0.25
CTNS-201ENST00000046640 DEUP1Q05D60 604 aa13.51□□□□□ -0.25
CTNS-201ENST00000046640 CHI3L2Q15782 390 aa13.51□□□□□ -0.25
CTNS-201ENST00000046640 SLC25A52Q3SY17 297 aa13.51□□□□□ -0.25
CTNS-201ENST00000046640 OTUD1Q5VV17 481 aaPredicted RBP13.51□□□□□ -0.25
CTNS-201ENST00000046640 C16orf46Q6P387 395 aa13.51□□□□□ -0.25
CTNS-201ENST00000046640 SH2D5Q6ZV89 423 aa13.51□□□□□ -0.25
CTNS-201ENST00000046640 CFAP61Q8NHU2 1237 aa13.51□□□□□ -0.25
CTNS-201ENST00000046640 WNT8BQ93098 351 aa13.51□□□□□ -0.25
CTNS-201ENST00000046640 EBNA1BP2Q99848 306 aaKnown RBP13.51□□□□□ -0.25
CTNS-201ENST00000046640 PRDM12Q9H4Q4 367 aa13.51□□□□□ -0.25
CTNS-201ENST00000046640 GDAP2Q9NXN4 497 aa13.51□□□□□ -0.25
CTNS-201ENST00000046640 FETUBQ9UGM5 382 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms